Activity-Based Fluorescent Probes for Hydrogen Sulfide and Related Reactive Sulfur Species

Hydrogen sulfide (H2S) is not only a well-established toxic gas but also an important small molecule bioregulator in all kingdoms of life. In contemporary biology, H2S is often classified as a "gasotransmitter," meaning that it is an endogenously produced membrane permeable gas that carries out essential cellular processes. Fluorescent probes for H2S and related reactive sulfur species (RSS) detection provide an important cornerstone for investigating the multifaceted roles of these important small molecules in complex biological systems. A now common approach to develop such tools is to develop "activity-based probes" that couple a specific H2S-mediated chemical reaction to a fluorescent output. This Review covers the different types of such probes and also highlights the chemical mechanisms by which each probe type is activated by specific RSS. Common examples include reduction of oxidized nitrogen motifs, disulfide exchange, electrophilic reactions, metal precipitation, and metal coordination. In addition, we also outline complementary activity-based probes for imaging reductant-labile and sulfane sulfur species, including persulfides and polysulfides. For probes highlighted in this Review, we focus on small molecule systems with demonstrated compatibility in cellular systems or related applications. Building from breadth of reported activity-based strategies and application, we also highlight key unmet challenges and future opportunities for advancing activity-based probes for H2S and related RSS.

Small-molecule fluorogenic probes based on indole scaffold

Indoles are the most versatile organic N-heterocyclic compounds widely present in bioactive natural products and used in different fields such as coordination chemistry, pharmacy, dyes, and medicine, as well as in the biology and polymer industries. More recently, the indole scaffold has been widely used in analytical chemistry for the design and development of small-molecule fluorescent chemosensors in the fields of molecular recognition and molecular imaging. The indole-based chemosensor derivatives contain heteroatoms like N-, O-, and S-, through which they interact with analytes (cations, anions, and neutral species), producing measurable analytical signals that can be used for the fluorimetric and colorimetric detection of different analytes in biological, agricultural and environmental samples. This review focuses on indole-based small-molecule fluorimetric and colorimetric chemosensors for detecting cations, anions, and neutral species in a comprehensive manner. Furthermore, the recognition mechanisms are discussed in detail, which could help researchers design and develop more powerful and efficient fluorescent chemosensors in the near future.

Small Molecule Optical Probes for Detection of H2S in Water Samples: A Review

Hydrogen sulfide (H2S) is closely linked to not only environmental hazards, but also it affects human health due to its toxic nature and the exposure risks associated with several occupational settings. Therefore, detection of this pollutant in water sources has garnered immense importance in the analytical research arena. Several research groups have devoted great efforts to explore the selective as well as sensitive methods to detect H2S concentrations in water. Recent studies describe different strategies for sensing this ubiquitous gas in real-life water samples. Though many of the designed and developed H2S detection approaches based on the use of organic small molecules facilitate qualitative/quantitative detection of the toxic contaminant in water, optical detection has been acknowledged as one of the best, attributed to the simple, highly sensitive, selective, and good repeatability features of the technique. Therefore, this review is an attempt to offer a general perspective of easy-to-use and fast response optical detection techniques for H2S, fluorimetry and colorimetry, over a wide variety of other instrumental platforms. The review affords a concise summary of the various design strategies adopted by various researchers in constructing small organic molecules as H2S sensors and offers insight into their mechanistic pathways. Moreover, it collates the salient aspects of optical detection techniques and highlights the future scope for prospective exploration in this field based on the limitations of the existing H2S probes.

Dinitrobenzene ether reactive turn-on fluorescence probes for the selective detection of H2S

Two novel fluorescent probes, namely, 3-(2,4-dinitrophenoxy)-2-(4-(diphenylamino)phenyl)-4H-chromen-4-one (P1) and 3-(2,4-dinitrophenoxy)-2-(pyren-1-yl)-4H-chromen-4-one (P2), were designed and synthesized here. The probes (P1 and P2) were found to be highly selective and sensitive toward hydrogen sulfide (H₂S) in the presence of a wide range of anions. The new probes (P1 and P2) were fully characterized by analytical, NMR spectroscopy (¹H and ¹³C), and ESI mass spectrometry. The sensing capability of chemodosimeters (P1 and P2) toward H₂S was confirmed by fluorescence studies. The 'turn-on' fluorescence was used to calculate the detection limit of probes (LOD), which were found to be 2.4 and 1.2 μM for P1 and P2, respectively. Moreover, the probes were tested for their cytotoxicity against HeLa cells using the MTT assay and found to be non-cytotoxic in nature; hence, the probes P1 and P2 were successfully utilized to visualize H₂S in the living cells.

Rational design of a new near-infrared fluorophore and apply to the detection and imaging study of cysteine and thiophenol

The development of a near-infrared fluorophore with excellent fluorescence performance, a large Stokes shift, and good biocompatibility has become a focus in the field of fluorescence imaging in recent years. Based on quantum chemistry calculations and reasonable molecular design strategies, a new NIR fluorophore was developed and characterized by simple synthesis, easy structural modification, and a large Stokes shift (105 nm). Furthermore, two new "activatable" fluorescent probes QN-Cys and QN-DNP were synthesized using a simple structural modification. The probe QN-Cys can recognize Cys with high sensitivity (LOD = 128 nM) and high selectivity, and its fluorescence intensity has a good linear relationship with the Cys concentration in the range of 5-35 μM. Furthermore, probe QN-Cys can effectively distinguish Cys from Hcy and GSH, and was successfully applied to the detection and imaging of Cys in human serum, cells, and zebrafish. The probe QN-DNP showed a good specific and sensitive (LOD = 78 nM) fluorescence response to thiophenol, and its fluorescence intensity has a good linear relationship with the thiophenol concentration in the range of 5-30 μM. Furthermore, it was successfully applied to detect thiophenol in real water samples with good recoveries (97-102%), and image thiophenol in living cells, zebrafish and mice. Notebly, the QN-DNP probe could be applied to visualize the distribution of thiophenol in the mice.

A Highly Selective and Sensitive Colorimetric Chemosensor for the Detection of Hydrogen Sulfide: Real-time Applications in Multiple Platforms

Calorimetric chemosensors are found to be advantageous sensing systems due to their simplicity and favorable responsive properties. Although some colorimetric probes have been reported to detect hydrogen sulfide (H₂ S), the creation of rapid, highly selective, and sensitive probes for the detection of H₂ S remains a challenging target. In this work, we established dinitrosulphonamide decorated phenanthridine, 2,4-dinitro-N-(4-(7,8,13,14-tetrahydrodibenzo[a, i]phenanthridin-5-yl)phenyl)benzenesulfonamide (PHSH), for the calorimetric detection of H₂ S. H₂ S triggered thiolysis of PHSH resulted in a marked absorption enhancement alongside a visual color change from colorless to dark yellow. The result indicated that the chemosensor showed high sensitivity and selectivity with a fast response of less than 10 s with a detection limit as low as 6.5 nM. The chemosensor reaction mechanism with H₂ S was studied by UV-vis, ¹ H NMR, mass and HPLC analysis. In addition, the chemosensor has been used for the determination of H₂ S in many real-time samples.

Fluorescein Based Fluorescence Sensors for the Selective Sensing of Various Analytes

Fluorescein molecules are extensively used to develop fluorescent probes for various analytes due to their excellent photophysical properties and the spirocyclic structure. The main structural modification of fluorescein occurs at the carboxyl group where different groups can be easily introduced to produce the spirolactam structure which is non-fluorescent. The spirolactam ring opening accounts for the fluorescence and the dual sensing of analytes using fluorescent sensors is still a topic of high interest. There is an increase in the number of dual sensors developed in the past five years and quite a good number of fluorescein derivatives were also reported based on reversible mechanisms. This review analyses environmentally and biologically important cations such as Cu²⁺, Hg²⁺, Fe³⁺, Pd²⁺, Zn²⁺, Cd²⁺, and Mg²⁺; anions (F^-, OCl^-) and small molecules (thiols, CO and H₂S). Structural modifications, binding mechanisms, different strategies and a comparative study for selected cations, anions and molecules are outlined in the article.

Fluorescent probes based on nucleophilic aromatic substitution reactions for reactive sulfur and selenium species: Recent progress, applications, and design strategies

Reactive sulfur species (RSS) and reactive selenium species (RSeS) are important substances for the maintenance of physiological balance. Imbalance of RSS and RSeS is closely related to a series of human diseases, so it is considered to be an important biomarker in early diagnosis, treatment, and stage monitoring. Fast and accurate quantitative analysis of different RSS and RSeS in complex biological systems may promote the development of personalized diagnosis and treatment in the future. One way to explore the physiological function of various types of RSS and RSeS in vivo is to detect them at the molecular level, and one of the most effective methods for this is to use fluorescent probes. Nucleophilic aromatic substitution (SNAr) reactions are commonly exploited as a detection mechanism for RSS and RSeS in fluorescent probes. In this review, we cover recent progress in fluorescent probes for RSS and RSeS based on SNAr reactions, and discuss their response mechanisms, properties, and applications. Benzenesulfonate, phenyl-O ether, phenyl-S ether, phenyl-Se ether, 7-nitro-2,1,3-benzoxadiazole (NBD), benzoate, and selenium-nitrogen bonds are all good detection groups. Moreover, based on an integration of different reports, we propose the design and synthesis of RSS- and RSeS-selective probes based on SNAr reactions, current challenges, and future research directions, considering the selection of active sites, the effect of substituents on the benzene ring, and the introduction of other functional groups.

TDDFT study on the photophysical properties of coumarinyl chalcones and sensing mechanism of a derived fluorescent probe for hydrogen sulfide

Coumarin-chalcone hybrids have attracted much attention in recent years due to their important optical properties. Herein, the photophysical properties of a series of coumarinyl chalcones and the sensing mechanism for H₂S of a related fluorescent probe CC-DNP were investigated using density functional theory (DFT) and time-dependent density functional theory (TDDFT) methods. The predicted spectral properties agree well with the experimental results, which allowed an assignment of the spectra. Our calculations successfully clarified the experimental observed fluorescence "off-on" effect and the fluorescent quenching mechanism of the probe. The results revealed that the first excited state (S₁) of the probe CC-DNP is a dark state with obvious charge transfer from coumarin unit to 2,4-dinitrophenyl (DNP) moiety, which results in the fluorescence quenching via the nonradiative photoinduced electron transfer (PET) process. On the other hand, the excited state S₁ in the thiolysis product CC-OH decayed directly to S₀, and thus the fluorescence is recovered.

Dosimetric Chromogenic Probe for Selective Detection of Sulfide via Sol-Gel Methodology

Dinitrobenzenesulfonyl-protected naphthyl azo pyridine conjugate 1 has been designed and synthesized. Compound 1 acts as a nongelator in dimethyl sulfoxide (DMSO)-H2O (1:1, v/v) while its hydroxy counterpart 2 can form a nice gel in the same solvent. In the presence of sulfide, compound 1 undergoes rapid sulfonate ester hydrolysis and results in the formation of azo-naphthol 2 that responds in instant gelation. Such deprotection was extremely selective to sulfide; other analytes did not show measurable response. The sensing mechanism has been established by various spectroscopic techniques. Compound 1 in solution (DMSO-H2O) also shows a selective response toward sulfide over a series of other anions with a color change. Preparation of test kit with compound 1 allows detection of sulfide in solution and vapor states. Such kind of dosimetric sensing of chemical analytes by improvising the protection/deprotection of functional groups in gelator structure is rare in the literature, and to the best of our knowledge, this is the first example of a stimuli-responsive low-molecular-weight gelator which dosimetrically senses sulfide over other nucleophilic substrates.

Living cell imaging and sensing of hydrogen sulfide using high-efficiency fluorescent Cu-doped carbon quantum dots

A simple Cu-doped carbon quantum dot-based fluorescent sensor for H₂S sensing and intracellular bioimaging was constructed.