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Clapacs Z, ONeill CL, Shrimali P, Lokhande G, Files M, Kim DD, Gaharwar AK, Rudra JS. Coiled Coil Crosslinked Alginate Hydrogels Dampen Macrophage-Driven Inflammation. Biomacromolecules 2022; 23:1183-1194. [PMID: 35170303 DOI: 10.1021/acs.biomac.1c01462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Alginate hydrogels are widely used for tissue engineering and regenerative medicine due to their excellent biocompatibility. A facile and commonly used strategy to crosslink alginate is the addition of Ca2+ that leads to hydrogelation. However, extracellular Ca2+ is a secondary messenger in activating inflammasome pathways following physical injury or pathogenic insult, which carries the risk of persistent inflammation and scaffold rejection. Here, we present graft copolymers of charge complementary heterodimeric coiled coil (CC) peptides and alginate that undergo supramolecular self-assembly to form Ca2+ free alginate hydrogels. The formation of heterodimeric CCs was confirmed using circular dichroism spectroscopy, and scanning electron microscopy revealed a significant difference in crosslink density and homogeneity between Ca2+ and CC crosslinked gels. The resulting hydrogels were self-supporting and display shear-thinning and shear-recovery properties. In response to lipopolysaccharide (LPS) stimulation, peritoneal macrophages and bone marrow-derived dendritic cells cultured in the CC crosslinked gels exhibited a 10-fold reduction in secretion of the proinflammatory cytokine IL-1β compared to Ca2+ crosslinked gels. A similar response was also observed in vivo upon peritoneal delivery of Ca2+ or CC crosslinked gels. Analysis of peritoneal lavage showed that macrophages in mice injected with Ca2+ crosslinked gels display a more inflammatory phenotype compared to macrophages from mice injected with CC crosslinked gels. These results suggest that CC peptides by virtue of their tunable sequence-structure-function relationship and mild gelation conditions are promising alternative crosslinkers for alginate and other biopolymer scaffolds used in tissue engineering.
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Affiliation(s)
- Zain Clapacs
- Department of Biomedical Engineering, Washington University, St. Louis, Missouri 63139, United States
| | - Conor L ONeill
- Department of Biomedical Engineering, Washington University, St. Louis, Missouri 63139, United States
| | - Paresh Shrimali
- Department of Biomedical Engineering, Washington University, St. Louis, Missouri 63139, United States
| | - Giriraj Lokhande
- Department of Biomedical Engineering, Texas A&M University, College Station, Texas 77840, United States
| | - Megan Files
- Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, Texas 77555, United States
| | - Darren D Kim
- Department of Biomedical Engineering, Washington University, St. Louis, Missouri 63139, United States
| | - Akhilesh K Gaharwar
- Department of Biomedical Engineering, Texas A&M University, College Station, Texas 77840, United States
| | - Jai S Rudra
- Department of Biomedical Engineering, Washington University, St. Louis, Missouri 63139, United States
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Supramolecular systems chemistry through advanced analytical techniques. Anal Bioanal Chem 2022; 414:5105-5119. [DOI: 10.1007/s00216-021-03824-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 11/26/2021] [Accepted: 12/01/2021] [Indexed: 11/01/2022]
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Diffusional microfluidics for protein analysis. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2021.116508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Arter WE, Levin A, Krainer G, Knowles TPJ. Microfluidic approaches for the analysis of protein-protein interactions in solution. Biophys Rev 2020; 12:575-585. [PMID: 32266673 PMCID: PMC7242286 DOI: 10.1007/s12551-020-00679-4] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2020] [Accepted: 03/02/2020] [Indexed: 12/15/2022] Open
Abstract
Exploration and characterisation of the human proteome is a key objective enabling a heightened understanding of biological function, malfunction and pharmaceutical design. Since proteins typically exhibit their behaviour by binding to other proteins, the challenge of probing protein-protein interactions has been the focus of new and improved experimental approaches. Here, we review recently developed microfluidic techniques for the study and quantification of protein-protein interactions. We focus on methodologies that utilise the inherent strength of microfluidics for the control of mass transport on the micron scale, to facilitate surface and membrane-free interrogation and quantification of interacting proteins. Thus, the microfluidic tools described here provide the capability to yield insights on protein-protein interactions under physiological conditions. We first discuss the defining principles of microfluidics, and methods for the analysis of protein-protein interactions that utilise the diffusion-controlled mixing characteristic of fluids at the microscale. We then describe techniques that employ electrophoretic forces to manipulate and fractionate interacting protein systems for their biophysical characterisation, before discussing strategies that use microdroplet compartmentalisation for the analysis of protein interactions. We conclude by highlighting future directions for the field, such as the integration of microfluidic experiments into high-throughput workflows for the investigation of protein interaction networks.
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Affiliation(s)
- William E Arter
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge, CB3 0HE, UK
| | - Aviad Levin
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - Georg Krainer
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - Tuomas P J Knowles
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK.
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge, CB3 0HE, UK.
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Charmet J, Rodrigues R, Yildirim E, Challa PK, Roberts B, Dallmann R, Whulanza Y. Low-Cost Microfabrication Tool Box. MICROMACHINES 2020; 11:mi11020135. [PMID: 31991826 PMCID: PMC7074766 DOI: 10.3390/mi11020135] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2019] [Revised: 01/17/2020] [Accepted: 01/21/2020] [Indexed: 01/27/2023]
Abstract
Microsystems are key enabling technologies, with applications found in almost every industrial field, including in vitro diagnostic, energy harvesting, automotive, telecommunication, drug screening, etc. Microsystems, such as microsensors and actuators, are typically made up of components below 1000 microns in size that can be manufactured at low unit cost through mass-production. Yet, their development for commercial or educational purposes has typically been limited to specialized laboratories in upper-income countries due to the initial investment costs associated with the microfabrication equipment and processes. However, recent technological advances have enabled the development of low-cost microfabrication tools. In this paper, we describe a range of low-cost approaches and equipment (below £1000), developed or adapted and implemented in our laboratories. We describe processes including photolithography, micromilling, 3D printing, xurography and screen-printing used for the microfabrication of structural and functional materials. The processes that can be used to shape a range of materials with sub-millimetre feature sizes are demonstrated here in the context of lab-on-chips, but they can be adapted for other applications. We anticipate that this paper, which will enable researchers to build a low-cost microfabrication toolbox in a wide range of settings, will spark a new interest in microsystems.
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Affiliation(s)
- Jérôme Charmet
- Warwick Manufacturing Group (WMG), University of Warwick, Coventry CV4 7AL, UK;
- Correspondence: (J.C.); (Y.W.); Tel.: +44-24-765-73566 (J.C.); +62-21-7270032 (Y.W.)
| | - Rui Rodrigues
- Warwick Manufacturing Group (WMG), University of Warwick, Coventry CV4 7AL, UK;
| | - Ender Yildirim
- Mechanical Engineering Department, Middle East Technical University, 06800 Ankara, Turkey;
| | - Pavan Kumar Challa
- Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, UK;
| | - Benjamin Roberts
- Warwick Medical School, University of Warwick, Coventry CV4 7AL, UK; (B.R.); (R.D.)
- MRC Doctoral Training Programme in Interdisciplinary Biomedical Research, University of Warwick, Coventry CV4 7AL, UK
| | - Robert Dallmann
- Warwick Medical School, University of Warwick, Coventry CV4 7AL, UK; (B.R.); (R.D.)
| | - Yudan Whulanza
- Department of Mechanical Engineering, Universitas Indonesia, Depok 16424, Indonesia
- Correspondence: (J.C.); (Y.W.); Tel.: +44-24-765-73566 (J.C.); +62-21-7270032 (Y.W.)
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Vanderpoorten O, Peter Q, Challa PK, Keyser UF, Baumberg J, Kaminski CF, Knowles TPJ. Scalable integration of nano-, and microfluidics with hybrid two-photon lithography. MICROSYSTEMS & NANOENGINEERING 2019; 5:40. [PMID: 31636930 PMCID: PMC6799807 DOI: 10.1038/s41378-019-0080-3] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Revised: 05/26/2019] [Accepted: 06/25/2019] [Indexed: 05/19/2023]
Abstract
Nanofluidic devices have great potential for applications in areas ranging from renewable energy to human health. A crucial requirement for the successful operation of nanofluidic devices is the ability to interface them in a scalable manner with the outside world. Here, we demonstrate a hybrid two photon nanolithography approach interfaced with conventional mask whole-wafer UV-photolithography to generate master wafers for the fabrication of integrated micro and nanofluidic devices. Using this approach we demonstrate the fabrication of molds from SU-8 photoresist with nanofluidic features down to 230 nm lateral width and channel heights from micron to sub-100 nm. Scanning electron microscopy and atomic force microscopy were used to characterize the printing capabilities of the system and show the integration of nanofluidic channels into an existing microfluidic chip design. The functionality of the devices was demonstrated through super-resolution microscopy, allowing the observation of features below the diffraction limit of light produced using our approach. Single molecule localization of diffusing dye molecules verified the successful imprint of nanochannels and the spatial confinement of molecules to 200 nm across the nanochannel molded from the master wafer. This approach integrates readily with current microfluidic fabrication methods and allows the combination of microfluidic devices with locally two-photon-written nano-sized functionalities, enabling rapid nanofluidic device fabrication and enhancement of existing microfluidic device architectures with nanofluidic features.
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Affiliation(s)
- Oliver Vanderpoorten
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge, CB3 0AS UK
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW UK
- Cavendish Laboratory, Department of Physics, University of Cambridge, J. J. Thomson Avenue, Cambridge, CB30HE UK
| | - Quentin Peter
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW UK
| | - Pavan K. Challa
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW UK
| | - Ulrich F. Keyser
- Cavendish Laboratory, Department of Physics, University of Cambridge, J. J. Thomson Avenue, Cambridge, CB30HE UK
| | - Jeremy Baumberg
- Cavendish Laboratory, Department of Physics, University of Cambridge, J. J. Thomson Avenue, Cambridge, CB30HE UK
| | - Clemens F. Kaminski
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge, CB3 0AS UK
| | - Tuomas P. J. Knowles
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW UK
- Cavendish Laboratory, Department of Physics, University of Cambridge, J. J. Thomson Avenue, Cambridge, CB30HE UK
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