1
|
Mazo N, Rahman IR, Navo CD, Peregrina JM, Busto JH, van der Donk WA, Jiménez-Osés G. Synthesis of Fluorescent Lanthipeptide Cytolysin S Analogues by Late-Stage Sulfamidate Ring Opening. Org Lett 2023; 25:1431-1435. [PMID: 36849130 PMCID: PMC10012263 DOI: 10.1021/acs.orglett.3c00122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Indexed: 03/01/2023]
Abstract
Nucleophilic ring opening of cyclic sulfamidates derived from amino acids is a common strategy for the synthesis of lanthionine derivatives. In this work, we report the regio-, chemo-, and stereoselective intramolecular S-alkylation of a cysteine residue with N-sulfonyl sulfamidates for the synthesis of cyclic lanthionine-containing peptides. The strategy involves the solid-phase synthesis of sulfamidate-containing peptides followed by late-stage intramolecular cyclization. This protocol allowed for the synthesis of four full-length cytolysin S (CylLS″) analogues, two α-peptides and two hybrid α/β-peptides. Their conformational preferences and biological activities were assessed and compared with those of wild-type CylLS″.
Collapse
Affiliation(s)
- Nuria Mazo
- Departamento
de Química, Centro de Investigación en Síntesis
Química, Universidad de La Rioja, 26006 Logroño, La Rioja, Spain
| | - Imran R. Rahman
- Department
of Biochemistry, University of Illinois
at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Claudio D. Navo
- Center
for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Building
800, 48160 Derio, Spain
| | - Jesús M. Peregrina
- Departamento
de Química, Centro de Investigación en Síntesis
Química, Universidad de La Rioja, 26006 Logroño, La Rioja, Spain
| | - Jesús H. Busto
- Departamento
de Química, Centro de Investigación en Síntesis
Química, Universidad de La Rioja, 26006 Logroño, La Rioja, Spain
| | - Wilfred A. van der Donk
- Department
of Chemistry and Howard Hughes Medical Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Gonzalo Jiménez-Osés
- Center
for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park, Building
800, 48160 Derio, Spain
- Ikerbaske, Basque Foundation for Science, 48013 Bilbao, Spain
| |
Collapse
|
2
|
Mazo N, Navo CD, Peccati F, Andreo J, Airoldi C, Goldsztejn G, Çarçabal P, Usabiaga I, Sodupe M, Wuttke S, Busto JH, Peregrina JM, Cocinero EJ, Jiménez-Osés G. Conformationally Restricted β-Sheet Breaker Peptides Incorporating Cyclic α-Methylisoserine Sulfamidates. Chemistry 2023; 29:e202202913. [PMID: 36377879 DOI: 10.1002/chem.202202913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2022] [Revised: 10/28/2022] [Accepted: 11/14/2022] [Indexed: 11/16/2022]
Abstract
Peptides containing variations of the β-amyloid hydrophobic core and five-membered sulfamidates derived from β-amino acid α-methylisoserine have been synthesized and fully characterized in the gas phase, solid state and in aqueous solution by a combination of experimental and computational techniques. The cyclic sulfamidate group effectively locks the secondary structure at the N-terminus of such hybrid peptides imposing a conformational restriction and stabilizing non-extended structures. This conformational bias, which is maintained in the gas phase, solid state and aqueous solution, is shown to be resistant to structure templating through assays of in vitro β-amyloid aggregation, acting as β-sheet breaker peptides with moderate activity.
Collapse
Affiliation(s)
- Nuria Mazo
- Departamento de Química, Universidad de La Rioja, Centro de Investigación en Síntesis Química, 26006, Logroño, Spain.,3P Biopharmaceuticals, 31110, Noáin, Navarra, Spain
| | - Claudio D Navo
- Computational Chemistry Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA) Bizkaia Technology Park, Building 800, 48160, Derio, Spain
| | - Francesca Peccati
- Computational Chemistry Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA) Bizkaia Technology Park, Building 800, 48160, Derio, Spain
| | - Jacopo Andreo
- BCMaterials, Basque Center for Materials, UPV/EHU Science Park, Leioa, 48940, Spain
| | - Cristina Airoldi
- BioOrgNMR Lab, Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza, 2, 20126, Milano, Italy
| | - Gildas Goldsztejn
- Institut des Sciences Moléculaires d'Orsay (ISMO), Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Pierre Çarçabal
- Institut des Sciences Moléculaires d'Orsay (ISMO), Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Imanol Usabiaga
- Departamento de Química Física, Facultad de Ciencia y Tecnología, Universidad del País Vasco (UPV/EHU), 48080, Bilbao, Spain.,Instituto Biofisika (CSIC, UPV/EHU), 48080, Bilbao, Spain
| | - Mariona Sodupe
- Departament de Química, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain
| | - Stefan Wuttke
- BCMaterials, Basque Center for Materials, UPV/EHU Science Park, Leioa, 48940, Spain.,Ikerbasque, Basque Foundation for Science, 48009, Bilbao, Spain
| | - Jesús H Busto
- Departamento de Química, Universidad de La Rioja, Centro de Investigación en Síntesis Química, 26006, Logroño, Spain
| | - Jesús M Peregrina
- Departamento de Química, Universidad de La Rioja, Centro de Investigación en Síntesis Química, 26006, Logroño, Spain
| | - Emilio J Cocinero
- Departamento de Química Física, Facultad de Ciencia y Tecnología, Universidad del País Vasco (UPV/EHU), 48080, Bilbao, Spain.,Instituto Biofisika (CSIC, UPV/EHU), 48080, Bilbao, Spain
| | - Gonzalo Jiménez-Osés
- Departamento de Química, Universidad de La Rioja, Centro de Investigación en Síntesis Química, 26006, Logroño, Spain.,Computational Chemistry Lab, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA) Bizkaia Technology Park, Building 800, 48160, Derio, Spain.,Ikerbasque, Basque Foundation for Science, 48009, Bilbao, Spain
| |
Collapse
|
3
|
Ferrari T, Blum C, Amini-Rentsch L, Brodard P, Dabros M, Hoehn P, Udvarhelyi A, Marti R, Parmentier M. Thermal Safety and Structure-Related Reactivity Investigation of Five-Membered Cyclic Sulfamidates. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.2c00130] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Thomas Ferrari
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Caitlin Blum
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Lara Amini-Rentsch
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Pierre Brodard
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Michal Dabros
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Pascale Hoehn
- Chemical and Analytical Development, Novartis Pharma AG, CH-4056 Basel, Switzerland
| | - Anikó Udvarhelyi
- Pharmaceutical and Analytical Development, Novartis Pharma AG, CH-4056 Basel, Switzerland
| | - Roger Marti
- Institute of Chemical Technology (ChemTech), University of Applied Sciences Western Switzerland (HES-SO), Haute école d’ingénierie et d’architecture de Fribourg, Boulevard de Pérolles 80, CH-1700 Fribourg, Switzerland
| | - Michaël Parmentier
- Chemical and Analytical Development, Novartis Pharma AG, CH-4056 Basel, Switzerland
| |
Collapse
|
4
|
Boto A, González CC, Hernández D, Romero-Estudillo I, Saavedra CJ. Site-selective modification of peptide backbones. Org Chem Front 2021. [DOI: 10.1039/d1qo00892g] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Exciting developments in the site-selective modification of peptide backbones are allowing an outstanding fine-tuning of peptide conformation, folding ability, and physico-chemical and biological properties.
Collapse
Affiliation(s)
- Alicia Boto
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Concepción C. González
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Dácil Hernández
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
| | - Iván Romero-Estudillo
- Centro de Investigaciones Químicas-IICBA, Universidad Autónoma del Estado de Morelos. Av. Universidad 1001, Cuernavaca, Morelos 62209, Mexico
- Catedrático CONACYT-CIQ-UAEM, Mexico
| | - Carlos J. Saavedra
- Instituto de Productos Naturales y Agrobiología del CSIC, Avda. Astrofísico Francisco Sánchez 3, 38206-La Laguna, Tenerife, Spain
- Programa Agustín de Betancourt, Universidad de la Laguna, 38200 Tenerife, Spain
| |
Collapse
|