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Guo M, Temperton R, D'Acunto G, Johansson N, Jones R, Handrup K, Ringelband S, Prakash O, Fan H, de Groot LHM, Hlynsson VF, Kaufhold S, Gordivska O, Velásquez González N, Wärnmark K, Schnadt J, Persson P, Uhlig J. Using Iron L-Edge and Nitrogen K-Edge X-ray Absorption Spectroscopy to Improve the Understanding of the Electronic Structure of Iron Carbene Complexes. Inorg Chem 2024; 63:12457-12468. [PMID: 38934422 PMCID: PMC11234367 DOI: 10.1021/acs.inorgchem.4c01026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2024]
Abstract
Iron-centered N-heterocyclic carbene compounds have attracted much attention in recent years due to their long-lived excited states with charge transfer (CT) character. Understanding the orbital interactions between the metal and ligand orbitals is of great importance for the rational tuning of the transition metal compound properties, e.g., for future photovoltaic and photocatalytic applications. Here, we investigate a series of iron-centered N-heterocyclic carbene complexes with +2, + 3, and +4 oxidation states of the central iron ion using iron L-edge and nitrogen K-edge X-ray absorption spectroscopy (XAS). The experimental Fe L-edge XAS data were simulated and interpreted through restricted-active space (RAS) and multiplet calculations. The experimental N K-edge XAS is simulated and compared with time-dependent density functional theory (TDDFT) calculations. Through the combination of the complementary Fe L-edge and N K-edge XAS, direct probing of the complex interplay of the metal and ligand character orbitals was possible. The σ-donating and π-accepting capabilities of different ligands are compared, evaluated, and discussed. The results show how X-ray spectroscopy, together with advanced modeling, can be a powerful tool for understanding the complex interplay of metal and ligand.
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Affiliation(s)
- Meiyuan Guo
- Division of Chemical Physics, Department of Chemistry, Lund University, 22100 Lund, Sweden
| | | | - Giulio D'Acunto
- Division of Synchrotron Radiation Research, Department of Physics, Lund University, 22100 Lund, Sweden
- NanoLund, Lund University, 22100 Lund, Sweden
- Department of Chemical Engineering, Stanford University, 94305 Stanford, California, United States
| | | | - Rosemary Jones
- Division of Synchrotron Radiation Research, Department of Physics, Lund University, 22100 Lund, Sweden
- NanoLund, Lund University, 22100 Lund, Sweden
| | | | - Sven Ringelband
- Division of Chemical Physics, Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Om Prakash
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Hao Fan
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Lisa H M de Groot
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Valtýr Freyr Hlynsson
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Simon Kaufhold
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Olga Gordivska
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | | | - Kenneth Wärnmark
- NanoLund, Lund University, 22100 Lund, Sweden
- Centre for Analysis and Synthesis (CAS), Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Joachim Schnadt
- MAX IV Laboratory, Lund University, 22100 Lund, Sweden
- Division of Synchrotron Radiation Research, Department of Physics, Lund University, 22100 Lund, Sweden
- NanoLund, Lund University, 22100 Lund, Sweden
| | - Petter Persson
- NanoLund, Lund University, 22100 Lund, Sweden
- Division of Computational Chemistry, Department of Chemistry, Lund University, 22100 Lund, Sweden
| | - Jens Uhlig
- Division of Chemical Physics, Department of Chemistry, Lund University, 22100 Lund, Sweden
- NanoLund, Lund University, 22100 Lund, Sweden
- LINXS Institute of Advanced Neutron and X-Ray Science, Lund University, 22370 Lund, Sweden
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Leroux J, Kotobi A, Hirsch K, Lau T, Ortiz-Mahecha C, Maksimov D, Meißner R, Oostenrijk B, Rossi M, Schubert K, Timm M, Trinter F, Unger I, Zamudio-Bayer V, Schwob L, Bari S. Mapping the electronic transitions of protonation sites in peptides using soft X-ray action spectroscopy. Phys Chem Chem Phys 2023; 25:25603-25618. [PMID: 37721108 DOI: 10.1039/d3cp02524a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2023]
Abstract
Near-edge X-ray absorption mass spectrometry (NEXAMS) around the nitrogen and oxygen K-edges was employed on gas-phase peptides to probe the electronic transitions related to their protonation sites, namely at basic side chains, the N-terminus and the amide oxygen. The experimental results are supported by replica exchange molecular dynamics and density-functional theory and restricted open-shell configuration with single calculations to attribute the transitions responsible for the experimentally observed resonances. We studied five tailor-made glycine-based pentapeptides, where we identified the signature of the protonation site of N-terminal proline, histidine, lysine and arginine, at 406 eV, corresponding to N 1s → σ*(NHx+) (x = 2 or 3) transitions, depending on the peptides. We compared the spectra of pentaglycine and triglycine to evaluate the sensitivity of NEXAMS to protomers. Separate resonances have been identified to distinguish two protomers in triglycine, the protonation site at the N-terminus at 406 eV and the protonation site at the amide oxygen characterized by a transition at 403.1 eV.
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Affiliation(s)
- Juliette Leroux
- CIMAP, CEA/CNRS/ENSICAEN/Université de Caen Normandie, 14050 Caen, France
- Deutsches Elektronen-Synchrotron DESY, Germany.
| | - Amir Kotobi
- Deutsches Elektronen-Synchrotron DESY, Germany.
- Helmholtz-Zentrum Hereon, Institute of Surface Science, 21502 Geesthacht, Germany
| | - Konstantin Hirsch
- Abteilung Hochempfindliche Röntgenspektroskopie, Helmholtz-Zentrum Berlin für Materialien und Energie, 12489 Berlin, Germany
| | - Tobias Lau
- Abteilung Hochempfindliche Röntgenspektroskopie, Helmholtz-Zentrum Berlin für Materialien und Energie, 12489 Berlin, Germany
| | - Carlos Ortiz-Mahecha
- Hamburg University of Technology, Institute of Polymers and Composites, 21073 Hamburg, Germany
| | - Dmitrii Maksimov
- Max Planck Institute for the Structure and Dynamics of Matter, 22761 Hamburg, Germany
| | - Robert Meißner
- Helmholtz-Zentrum Hereon, Institute of Surface Science, 21502 Geesthacht, Germany
- Hamburg University of Technology, Institute of Polymers and Composites, 21073 Hamburg, Germany
| | | | - Mariana Rossi
- Max Planck Institute for the Structure and Dynamics of Matter, 22761 Hamburg, Germany
| | | | - Martin Timm
- Abteilung Hochempfindliche Röntgenspektroskopie, Helmholtz-Zentrum Berlin für Materialien und Energie, 12489 Berlin, Germany
| | - Florian Trinter
- Institut für Kernphysik, Goethe-Universität Frankfurt am Main, 60438 Frankfurt am Main, Germany
- Molecular Physics, Fritz-Haber-Institut der Max-Planck-Gesellschaft, 14195 Berlin, Germany
| | - Isaak Unger
- Department of Physics and Astronomy, Uppsala University, 75120 Uppsala, Sweden
| | - Vicente Zamudio-Bayer
- Abteilung Hochempfindliche Röntgenspektroskopie, Helmholtz-Zentrum Berlin für Materialien und Energie, 12489 Berlin, Germany
| | | | - Sadia Bari
- Deutsches Elektronen-Synchrotron DESY, Germany.
- The Hamburg Centre for Ultrafast Imaging, Hamburg, Germany
- Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands
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Schubert K, Schwob L, Dörner S, Girod M, MacAleese L, Pieterse CL, Schlathölter T, Techert S, Bari S. Ionization and Photofragmentation of Isolated Metalloporphyrin Cations Investigated by VUV Action Spectroscopy*. Chemistry 2021; 27:12371-12379. [PMID: 34137472 PMCID: PMC8457234 DOI: 10.1002/chem.202101515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Indexed: 11/13/2022]
Abstract
We investigated the photoionization and fragmentation of isolated metal protoporphyrin IX cations (MPPIX+ with M=Fe, Co, Zn) by means of vacuum-ultraviolet (VUV) action spectroscopy in the energy range of 8.5-35 eV. Experiments were carried out in the gas phase by interfacing an electrospray ionization tandem mass spectrometer with a synchrotron beamline. The mass spectra and partial ion yields show that photoexcitation of the precursor ions predominantly leads to . CH2 COOH radical side-chain losses of the macrocycle with additional methyl radical (. CH3 ) side-chain losses. Ionization, in contrast, leads to the formation of the intact ionized precursor and various doubly charged fragments which are mostly due to side-chain cleavages. Although statistical fragmentation dominates, we found evidence for non-statistical processes such as new fragments involving for example single and double H2 O losses, indicating that different relaxation mechanisms are at play upon photoionization compared to photoexcitation. The measured ionization energies were 9.6±0.2 eV, 9.4±0.2 eV and 9.6±0.2 eV for FePPIX+ , CoPPIX+ and ZnPPIX+ , respectively.
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Affiliation(s)
- Kaja Schubert
- Deutsches Elektronen-Synchrotron DESYNotkestr. 8522607HamburgGermany
| | - Lucas Schwob
- Deutsches Elektronen-Synchrotron DESYNotkestr. 8522607HamburgGermany
| | - Simon Dörner
- Deutsches Elektronen-Synchrotron DESYNotkestr. 8522607HamburgGermany
| | - Marion Girod
- Univ LyonUniversité Claude Bernard Lyon 1CNRS UMR 5280Institut des Sciences Analytiques5 rue de la Doua69100VilleurbanneFrance
| | - Luke MacAleese
- Univ LyonUniversité Claude Bernard Lyon 1CNRS UMR 5306Institut Lumière Matière69622LyonFrance
| | | | - Thomas Schlathölter
- Zernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Simone Techert
- Deutsches Elektronen-Synchrotron DESYNotkestr. 8522607HamburgGermany
- Institut für RöntgenphysikGeorg-August-Universität GöttingenFriedrich-Hund-Platz 137077GöttingenGermany
| | - Sadia Bari
- Deutsches Elektronen-Synchrotron DESYNotkestr. 8522607HamburgGermany
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Shen T, Chang Z, Liu X, Chen Q, Feng L. Palladium complex composites based on fullerene encapsulated in porous zinc porphyrin polymers. JOURNAL OF MACROMOLECULAR SCIENCE PART A-PURE AND APPLIED CHEMISTRY 2021. [DOI: 10.1080/10601325.2021.1964369] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Tieyin Shen
- Department of Bioengineering, Zunyi Medical University (Zhuhai Campus), Zhuhai, China
| | - Zhaosen Chang
- State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, China
| | - Xin Liu
- State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, China
| | - Qi Chen
- State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, China
| | - Lijuan Feng
- Department of Bioengineering, Zunyi Medical University (Zhuhai Campus), Zhuhai, China
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