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Lesiuk M, Moszynski R. Reexamination of the calculation of two-center, two-electron integrals over Slater-type orbitals. I. Coulomb and hybrid integrals. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:063318. [PMID: 25615232 DOI: 10.1103/physreve.90.063318] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2014] [Indexed: 06/04/2023]
Abstract
In this paper, which constitutes the first part of the series, we consider calculation of two-center Coulomb and hybrid integrals over Slater-type orbitals. General formulas for these integrals are derived with no restrictions on the values of the quantum numbers and nonlinear parameters. Direct integration over the coordinates of one of the electrons leaves us with the set of overlaplike integrals which are evaluated by using two distinct methods. The first one is based on the transformation to the ellipsoidal coordinates system and the second utilizes a recursive scheme for consecutive increase of the angular momenta in the integrand. In both methods simple one-dimensional numerical integrations are used in order to avoid severe digital erosion connected with the straightforward use of the alternative analytical formulas. It is discussed that the numerical integration does not introduce a large computational overhead since the integrands are well-behaved functions, calculated recursively with decent speed. Special attention is paid to the numerical stability of the algorithms. Applicability of the resulting scheme over a large range of the nonlinear parameters is tested on examples of the most difficult integrals appearing in the actual calculations including, at most, 7i-type functions (l=6).
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Affiliation(s)
- Michał Lesiuk
- Faculty of Chemistry, University of Warsaw and Pasteura 1, 02-093 Warsaw, Poland
| | - Robert Moszynski
- Faculty of Chemistry, University of Warsaw and Pasteura 1, 02-093 Warsaw, Poland
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Limpanuparb T, Milthorpe J, Rendell AP. Resolutions of the Coulomb operator: VIII. Parallel implementation using the modern programming language X10. J Comput Chem 2014; 35:2056-69. [PMID: 25209872 DOI: 10.1002/jcc.23720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2014] [Revised: 07/27/2014] [Accepted: 08/12/2014] [Indexed: 11/08/2022]
Abstract
Use of the modern parallel programming language X10 for computing long-range Coulomb and exchange interactions is presented. By using X10, a partitioned global address space language with support for task parallelism and the explicit representation of data locality, the resolution of the Ewald operator can be parallelized in a straightforward manner including use of both intranode and internode parallelism. We evaluate four different schemes for dynamic load balancing of integral calculation using X10's work stealing runtime, and report performance results for long-range HF energy calculation of large molecule/high quality basis running on up to 1024 cores of a high performance cluster machine.
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Affiliation(s)
- Taweetham Limpanuparb
- Science Division, Mahidol University International College, Mahidol University, Salaya, Phutthamonthon, Nakhonpathom, 73170, Thailand; Research School of Computer Science, Australian National University, ACT, 0200, Australia
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Yamada T, Brewster RP, Hirata S. Asymptotic expansion of two-electron integrals and its application to Coulomb and exchange lattice sums in metallic, semimetallic, and nonmetallic crystals. J Chem Phys 2013; 139:184107. [DOI: 10.1063/1.4828796] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Tomonori Yamada
- Department of Chemistry, University of Illinois at Urbana-Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, USA
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Limpanuparb T, Milthorpe J, Rendell AP, Gill PMW. Resolutions of the Coulomb Operator: VII. Evaluation of Long-Range Coulomb and Exchange Matrices. J Chem Theory Comput 2013; 9:863-7. [PMID: 26588729 DOI: 10.1021/ct301110y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Use of the resolution of Ewald operator method for computing long-range Coulomb and exchange interactions is presented. We show that the accuracy of this method can be controlled by a single parameter in a manner similar to that used by conventional algorithms that compute two-electron integrals. Significant performance advantages over conventional algorithms are observed, particularly for high quality basis sets and globular systems. The approach is directly applicable to hybrid density functional theory.
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Affiliation(s)
- Taweetham Limpanuparb
- Research School of Computer Science, Australian National University, ACT 0200, Australia.,Mahidol University International College, Mahidol University, Nakhonpathom 73170, Thailand
| | - Josh Milthorpe
- Research School of Computer Science, Australian National University, ACT 0200, Australia
| | - Alistair P Rendell
- Research School of Computer Science, Australian National University, ACT 0200, Australia
| | - Peter M W Gill
- Research School of Chemistry, Australian National University, ACT 0200, Australia
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Dominici DE, Gill PMW, Limpanuparb T. A remarkable identity involving Bessel functions. Proc Math Phys Eng Sci 2012. [DOI: 10.1098/rspa.2011.0664] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
We consider a new identity involving integrals and sums of Bessel functions. The identity provides new ways to evaluate integrals of products of two Bessel functions. The identity is remarkably simple and powerful since the summand and the integrand are of exactly the same form and the sum converges to the integral relatively fast for most cases. A proof and numerical examples of the identity are discussed.
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Affiliation(s)
- Diego E. Dominici
- Technische Universität Berlin, Straße des 17. Juni 136, 10623 Berlin, Germany
| | - Peter M. W. Gill
- Research School of Chemistry, Australian National University, Australian Captial Territory 0200, Australia
| | - Taweetham Limpanuparb
- Research School of Chemistry, Australian National University, Australian Captial Territory 0200, Australia
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Limpanuparb T, Hollett JW, Gill PMW. Resolutions of the Coulomb operator. VI. Computation of auxiliary integrals. J Chem Phys 2012; 136:104102. [PMID: 22423823 DOI: 10.1063/1.3691829] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
We discuss the efficient computation of the auxiliary integrals that arise when resolutions of two-electron operators (specifically, the Coulomb operator [T. Limpanuparb, A. T. B. Gilbert, and P. M. W. Gill, J. Chem. Theory Comput. 7, 830 (2011)] and the long-range Ewald operator [T. Limpanuparb and P. M. W. Gill, J. Chem. Theory Comput. 7, 2353 (2011)]) are employed in quantum chemical calculations. We derive a recurrence relation that facilitates the generation of auxiliary integrals for Gaussian basis functions of arbitrary angular momentum and propose a near-optimal algorithm for its use.
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Affiliation(s)
- Taweetham Limpanuparb
- Research School of Chemistry, Australian National University, Canberra, ACT 0200, Australia.
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Purwanto W, Krakauer H, Virgus Y, Zhang S. Assessing weak hydrogen binding on Ca+centers: An accurate many-body study with large basis sets. J Chem Phys 2011; 135:164105. [DOI: 10.1063/1.3654002] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
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Limpanuparb T, Gill PMW. Resolutions of the Coulomb Operator: V. The Long-Range Ewald Operator. J Chem Theory Comput 2011; 7:2353-7. [PMID: 26606610 DOI: 10.1021/ct200305n] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
We show that the long-range Ewald operator can be resolved as erf(ωr12)/r12 = ∑k ϕk*(r1) ϕk(r2), where ϕk is proportional to the product of a spherical Bessel function and a spherical harmonic. We demonstrate the use of this new resolution by calculating the long-range Coulomb energy of the nanodiamond crystallite C84H64 and the long-range exchange energy of the graphene C96H24. The resolution appears particularly effective for long-range exchange calculations.
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Affiliation(s)
- Taweetham Limpanuparb
- Research School of Chemistry, Australian National University , Canberra ACT 0200, Australia
| | - Peter M W Gill
- Research School of Chemistry, Australian National University , Canberra ACT 0200, Australia
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Limpanuparb T, Gilbert ATB, Gill PMW. Resolutions of the Coulomb Operator: IV. The Spherical Bessel Quasi-Resolution. J Chem Theory Comput 2011; 7:830-3. [PMID: 26606335 DOI: 10.1021/ct200115t] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Taweetham Limpanuparb
- Research School of Chemistry, Australian National University, Canberra ACT 0200, Australia
| | - Andrew T B Gilbert
- Research School of Chemistry, Australian National University, Canberra ACT 0200, Australia
| | - Peter M W Gill
- Research School of Chemistry, Australian National University, Canberra ACT 0200, Australia
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Lambrecht DS, Brandhorst K, Miller WH, McCurdy CW, Head-Gordon M. A Kinetic Energy Fitting Metric for Resolution of the Identity Second-Order Møller−Plesset Perturbation Theory. J Phys Chem A 2011; 115:2794-801. [DOI: 10.1021/jp108218w] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Daniel S. Lambrecht
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Kai Brandhorst
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - William H. Miller
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - C. William McCurdy
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department of Chemistry, University of California, Davis, California 95616, United States
| | - Martin Head-Gordon
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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Abstract
We discuss several measures of the quality of a molecular orbital. Each requires only that the orbital be associated with a well-defined Fock operator and is thus applicable to both Hartree–Fock and density functional orbitals. One of the measures, the γ diagnostic, ranges from γ = 0 (perfect) to γ = π/2 (poor) and is conceptually simple. We illustrate its usefulness by applying it to a number of small atoms and ions.
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Affiliation(s)
- Jia Deng
- Research School of Chemistry, Australian National University, ACT 0200, Australia
| | - Andrew T.B. Gilbert
- Research School of Chemistry, Australian National University, ACT 0200, Australia
| | - Peter M.W. Gill
- Research School of Chemistry, Australian National University, ACT 0200, Australia
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Pedersen TB, Aquilante F, Lindh R. Density fitting with auxiliary basis sets from Cholesky decompositions. Theor Chem Acc 2009. [DOI: 10.1007/s00214-009-0608-y] [Citation(s) in RCA: 107] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Limpanuparb T, Gill PMW. Resolutions of the Coulomb operator : Part III. Reduced-rank Schrödinger equations. Phys Chem Chem Phys 2009; 11:9176-81. [DOI: 10.1039/b910613h] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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