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AlMomani AAR, Bollt E. Go With the Flow, on Jupiter and Snow. Coherence from Model-Free Video Data Without Trajectories. JOURNAL OF NONLINEAR SCIENCE 2020; 30:2375-2404. [DOI: 10.1007/s00332-018-9470-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2017] [Accepted: 05/18/2018] [Indexed: 09/02/2023]
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Doan M, Simons JJ, Lilienthal K, Solomon T, Mitchell KA. Barriers to front propagation in laminar, three-dimensional fluid flows. Phys Rev E 2018; 97:033111. [PMID: 29776060 DOI: 10.1103/physreve.97.033111] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Indexed: 11/07/2022]
Abstract
We present experiments on one-way barriers that block reaction fronts in a fully three-dimensional (3D) fluid flow. Fluorescent Belousov-Zhabotinsky reaction fronts are imaged with laser-scanning in a laminar, overlapping vortex flow. The barriers are analyzed with a 3D extension to burning invariant manifold (BIM) theory that was previously applied to two-dimensional advection-reaction-diffusion processes. We discover tube and sheet barriers that guide the front evolution. The experimentally determined barriers are explained by BIMs calculated from a model of the flow.
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Affiliation(s)
- Minh Doan
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
| | - J J Simons
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
| | - Katherine Lilienthal
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
| | - Tom Solomon
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
| | - Kevin A Mitchell
- School of Natural Sciences, University of California, Merced, California 95344, USA
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Nevins TD, Kelley DH. Front tracking velocimetry in advection-reaction-diffusion systems. CHAOS (WOODBURY, N.Y.) 2018; 28:043122. [PMID: 31906630 DOI: 10.1063/1.5020055] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
In advection-reaction-diffusion systems, the spreading of a reactive scalar can be significantly influenced by the flow field in which it grows. In systems with sharp boundaries between reacted and unreacted regions, motion of the reaction fronts that lie at those boundaries can quantify spreading. Here, we present an algorithm for measuring the velocity of reaction fronts in the presence of flow, expanding previous work on tracking reaction fronts without flow. The algorithm provides localized measurements of front speed and can distinguish its two components: one from chemical dynamics and another from the underlying flow. We validate that the algorithm returns the expected front velocity components in two simulations and then show that in complex experimental flows, the measured front velocity maps fronts from one time step to the next self-consistently. Finally, we observe a variation of the chemical speed with flow speed in a variety of experiments with different time scales and length scales.
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Affiliation(s)
- Thomas D Nevins
- Department of Physics and Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - Douglas H Kelley
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
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Wang J, Tithof J, Nevins TD, Colón RO, Kelley DH. Optimal stretching in the reacting wake of a bluff body. CHAOS (WOODBURY, N.Y.) 2017; 27:123109. [PMID: 29289053 DOI: 10.1063/1.5004649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We experimentally study spreading of the Belousov-Zhabotinsky reaction behind a bluff body in a laminar flow. Locations of reacted regions (i.e., regions with high product concentration) correlate with a moderate range of Lagrangian stretching and that range is close to the range of optimal stretching previously observed in topologically different flows [T. D. Nevins and D. H. Kelley, Phys. Rev. Lett. 117, 164502 (2016)]. The previous work found optimal stretching in a closed, vortex dominated flow, but this article uses an open flow and only a small area of appreciable vorticity. We hypothesize that optimal stretching is common in advection-reaction-diffusion systems with an excitation threshold, including excitable and bistable systems, and that the optimal range depends on reaction chemistry and not on flow shape or characteristic speed. Our results may also give insight into plankton blooms behind islands in ocean currents.
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Affiliation(s)
- Jinge Wang
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
| | - Jeffrey Tithof
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
| | - Thomas D Nevins
- Department of Physics & Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - Rony O Colón
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
| | - Douglas H Kelley
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
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Nevins TD, Kelley DH. Front tracking for quantifying advection-reaction-diffusion. CHAOS (WOODBURY, N.Y.) 2017; 27:043105. [PMID: 28456164 DOI: 10.1063/1.4979668] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We present an algorithm for measuring the speed and thickness of reaction fronts, and from those quantities, the diffusivity and the reaction rate of the active chemical species. This front-tracking algorithm provides local measurements suitable for statistics and requires only a sequence of concentration fields. Though our eventual goal is front tracking in advection-reaction-diffusion, here we demonstrate the algorithm in reaction-diffusion. We test the algorithm with validation data in which front speed and thickness are prescribed, as well as simulation results in which diffusivity and reaction rate are prescribed. In all tests, measurements closely match true values. We apply the algorithm to laboratory experiments using the Belousov-Zhabotinsky reaction, producing speed, diffusivity, and reaction rate measurements that are statistically more robust than in prior studies. Finally, we use thickness measurements to quantify the concentration profile of chemical waves in the reaction.
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Affiliation(s)
- Thomas D Nevins
- Department of Physics and Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - Douglas H Kelley
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
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Nevins TD, Kelley DH. Optimal Stretching in Advection-Reaction-Diffusion Systems. PHYSICAL REVIEW LETTERS 2016; 117:164502. [PMID: 27792376 DOI: 10.1103/physrevlett.117.164502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Indexed: 06/06/2023]
Abstract
We investigate growth of the excitable Belousov-Zhabotinsky reaction in chaotic, time-varying flows. In slow flows, reacted regions tend to lie near vortex edges, whereas fast flows restrict reacted regions to vortex cores. We show that reacted regions travel toward vortex centers faster as flow speed increases, but nonreactive scalars do not. For either slow or fast flows, reaction is promoted by the same optimal range of the local advective stretching, but stronger stretching causes reaction blowout and can hinder reaction from spreading. We hypothesize that optimal stretching and blowout occur in many advection-diffusion-reaction systems, perhaps creating ecological niches for phytoplankton in the ocean.
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Affiliation(s)
- Thomas D Nevins
- Department of Physics and Astronomy, University of Rochester, Rochester, New York 14627, USA
| | - Douglas H Kelley
- Department of Mechanical Engineering, University of Rochester, Rochester, New York 14627, USA
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Peacock T, Froyland G, Haller G. Introduction to Focus Issue: Objective Detection of Coherent Structures. CHAOS (WOODBURY, N.Y.) 2015; 25:087201. [PMID: 26328571 DOI: 10.1063/1.4928894] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Affiliation(s)
- T Peacock
- Mechanical Engineering Department, Massachusetts Institute of Technology, Cambridge, Massachusetts 20139, USA
| | - G Froyland
- School of Mathematics and Statistics, University of New South Wales, Sydney, Sydney NSW 2052, Australia
| | - G Haller
- Institute for Mechanical Systems, ETH Zürich, Zurich 8092, Switzerland
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Gowen S, Solomon T. Experimental studies of coherent structures in an advection-reaction-diffusion system. CHAOS (WOODBURY, N.Y.) 2015; 25:087403. [PMID: 26328574 DOI: 10.1063/1.4918594] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We present experimental studies of reaction front propagation in a single vortex flow with an imposed external wind. The fronts are produced by the excitable, ferroin-catalyzed Belousov-Zhabotinsky chemical reaction. The flow is generated using an electromagnetic forcing technique: an almost-radial electrical current interacts with a magnetic field from a magnet below the fluid layer to produce the vortex. The magnet is mounted on crossed translation stages allowing for movement of the vortex through the flow. Reaction fronts triggered in or in front of the moving vortex form persistent structures that are seen experimentally for time-independent (constant motion), time-periodic, and time-aperiodic flows. These results are examined with the use of burning invariant manifolds that act as one-way barriers to front motion in the flows. We also explore the usefulness of finite-time Lyapunov exponent fields as an instrument for analyzing front propagation behavior in a fluid flow.
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Affiliation(s)
- Savannah Gowen
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
| | - Tom Solomon
- Department of Physics and Astronomy, Bucknell University, Lewisburg, Pennsylvania 17837, USA
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