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Mann RS, Glassford WJ. Hox genes: The original body builders. Semin Cell Dev Biol 2024; 152-153:1-3. [PMID: 37291029 PMCID: PMC10949336 DOI: 10.1016/j.semcdb.2023.05.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Affiliation(s)
- Richard S Mann
- Department of Biochemistry and Molecular Biophysics, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States; Department of Neuroscience, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States; Department of Systems Biology, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States.
| | - William J Glassford
- Department of Biochemistry and Molecular Biophysics, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States; Department of Neuroscience, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States; Department of Systems Biology, Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, United States
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Palmateer CM, Artikis C, Brovero SG, Friedman B, Gresham A, Arbeitman MN. Single-cell transcriptome profiles of Drosophila fruitless-expressing neurons from both sexes. eLife 2023; 12:e78511. [PMID: 36724009 PMCID: PMC9891730 DOI: 10.7554/elife.78511] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 01/08/2023] [Indexed: 02/02/2023] Open
Abstract
Drosophila melanogaster reproductive behaviors are orchestrated by fruitless neurons. We performed single-cell RNA-sequencing on pupal neurons that produce sex-specifically spliced fru transcripts, the fru P1-expressing neurons. Uniform Manifold Approximation and Projection (UMAP) with clustering generates an atlas containing 113 clusters. While the male and female neurons overlap in UMAP space, more than half the clusters have sex differences in neuron number, and nearly all clusters display sex-differential expression. Based on an examination of enriched marker genes, we annotate clusters as circadian clock neurons, mushroom body Kenyon cell neurons, neurotransmitter- and/or neuropeptide-producing, and those that express doublesex. Marker gene analyses also show that genes that encode members of the immunoglobulin superfamily of cell adhesion molecules, transcription factors, neuropeptides, neuropeptide receptors, and Wnts have unique patterns of enriched expression across the clusters. In vivo spatial gene expression links to the clusters are examined. A functional analysis of fru P1 circadian neurons shows they have dimorphic roles in activity and period length. Given that most clusters are comprised of male and female neurons indicates that the sexes have fru P1 neurons with common gene expression programs. Sex-specific expression is overlaid on this program, to build the potential for vastly different sex-specific behaviors.
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Affiliation(s)
- Colleen M Palmateer
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
| | - Catherina Artikis
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
| | - Savannah G Brovero
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
| | - Benjamin Friedman
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
| | - Alexis Gresham
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
| | - Michelle N Arbeitman
- Department of Biomedical Sciences, Florida State University, College of MedicineTallahasseeUnited States
- Program of Neuroscience, Florida State UniversityTallahasseeUnited States
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Ng TH, Kurtz J. Dscam in immunity: A question of diversity in insects and crustaceans. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY 2020; 105:103539. [PMID: 31734281 DOI: 10.1016/j.dci.2019.103539] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 11/07/2019] [Accepted: 11/09/2019] [Indexed: 06/10/2023]
Abstract
In insects and crustaceans, thousands of Down syndrome cell adhesion molecules (Dscam) can be generated by alternative splicing of variable exons from a single-locus gene, Dscam-hv. This extraordinarily versatile gene (38,016 protein isoforms produced in Drosophila) was first proposed to be involved in exon guidance and subsequently implicated in immunity as a hypervariable immune molecule. Almost 20 y after discovery of Dscam-hv, there have been many studies in insects and crustaceans regarding roles of Dscam in immunity, with many similarities and concurrently, many differences. Here, we review the current status of Dscam-hv, presented as a comparison of similarities and differences in insects and crustaceans and discuss hypotheses of Dscam functions in immunity.
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Affiliation(s)
- Tze Hann Ng
- Institute for Evolution and Biodiversity, University of Münster, Hüfferstrasse 1, 48149, Münster, Germany
| | - Joachim Kurtz
- Institute for Evolution and Biodiversity, University of Münster, Hüfferstrasse 1, 48149, Münster, Germany.
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Liu Q, Onal P, Datta RR, Rogers JM, Schmidt-Ott U, Bulyk ML, Small S, Thornton JW. Ancient mechanisms for the evolution of the bicoid homeodomain's function in fly development. eLife 2018; 7:e34594. [PMID: 30298815 PMCID: PMC6177261 DOI: 10.7554/elife.34594] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Accepted: 07/28/2018] [Indexed: 12/14/2022] Open
Abstract
The ancient mechanisms that caused developmental gene regulatory networks to diversify among distantly related taxa are not well understood. Here we use ancestral protein reconstruction, biochemical experiments, and developmental assays of transgenic animals carrying reconstructed ancestral genes to investigate how the transcription factor Bicoid (Bcd) evolved its central role in anterior-posterior patterning in flies. We show that most of Bcd's derived functions are attributable to evolutionary changes within its homeodomain (HD) during a phylogenetic interval >140 million years ago. A single substitution from this period (Q50K) accounts almost entirely for the evolution of Bcd's derived DNA specificity in vitro. In transgenic embryos expressing the reconstructed ancestral HD, however, Q50K confers activation of only a few of Bcd's transcriptional targets and yields a very partial rescue of anterior development. Adding a second historical substitution (M54R) confers regulation of additional Bcd targets and further rescues anterior development. These results indicate that two epistatically interacting mutations played a major role in the evolution of Bcd's controlling regulatory role in early development. They also show how ancestral sequence reconstruction can be combined with in vivo characterization of transgenic animals to illuminate the historical mechanisms of developmental evolution.
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Affiliation(s)
- Qinwen Liu
- Department of Ecology and EvolutionUniversity of ChicagoChicagoUnited States
| | - Pinar Onal
- Department of BiologyNew York UniversityNew YorkUnited States
| | - Rhea R Datta
- Department of BiologyNew York UniversityNew YorkUnited States
| | - Julia M Rogers
- Committee on Higher Degrees in BiophysicsHarvard UniversityCambridgeUnited States
- Division of Genetics, Department of MedicineBrigham and Women’s Hospital and Harvard Medical SchoolBostonUnited States
| | - Urs Schmidt-Ott
- Department of Organismal Biology and AnatomyUniversity of ChicagoChicagoUnited States
| | - Martha L Bulyk
- Committee on Higher Degrees in BiophysicsHarvard UniversityCambridgeUnited States
- Division of Genetics, Department of MedicineBrigham and Women’s Hospital and Harvard Medical SchoolBostonUnited States
- Department of PathologyBrigham and Women’s Hospital and Harvard Medical SchoolBostonUnited States
| | - Stephen Small
- Department of BiologyNew York UniversityNew YorkUnited States
| | - Joseph W Thornton
- Department of Ecology and EvolutionUniversity of ChicagoChicagoUnited States
- Department of Human GeneticsUniversity of ChicagoChicagoUnited States
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5
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Takagi S, Nose A. Circuit architecture for somatotopic action selection in invertebrates. Neurosci Res 2018; 140:37-42. [PMID: 30130542 DOI: 10.1016/j.neures.2018.08.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2018] [Revised: 08/06/2018] [Accepted: 08/10/2018] [Indexed: 11/24/2022]
Abstract
Invertebrate species have significantly contributed to neuroscience owing to the accessibility they provide to cellular- and molecular-level understanding of brain functions. Somatotopic action selection is one of the key features of animal behavior, and studying this process in invertebrates is potentially a sweet spot in understanding the general relationship between neuronal morphology, circuit structure, and animal behavior. In this review, we introduce circuit architectures that realize somatotopic action selection, from simple reflexes to patterned motor outputs, in different invertebrate species. We then discuss future directions towards understanding the general principles underlying the development and evolution of the circuit architecture that enables sensorimotor transformation and action selection in the animal kingdom.
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Affiliation(s)
- Suguru Takagi
- Department of Physics, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
| | - Akinao Nose
- Department of Physics, Graduate School of Science, The University of Tokyo, Tokyo, Japan; Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Japan
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Torday J, Miller WB. Terminal addition in a cellular world. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2018; 135:1-10. [DOI: 10.1016/j.pbiomolbio.2017.12.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Revised: 12/14/2017] [Accepted: 12/18/2017] [Indexed: 02/04/2023]
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Thompson KJ. Oviposition-like central pattern generators in pregenital segments of male and female grasshoppers. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2018; 204:419-433. [PMID: 29423751 DOI: 10.1007/s00359-018-1249-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 01/27/2018] [Accepted: 01/31/2018] [Indexed: 10/18/2022]
Abstract
Grasshoppers produce an extraordinary oviposition behavior that is associated with multiple specializations of the skeletal and neuromuscular systems in the posterior abdomen, including a central pattern generator (CPG) in the female's terminal abdominal ganglion. Two pairs of shovel-shaped appendages, the ovipositor valves on the abdomen tip, excavate the soil for deposition of eggs. By contrast, the sexually monomorphic pregenital region of the abdomen is without appendages. Morphological homologues of ovipositor muscles and efferent neurons in the eighth abdominal segment are nevertheless present in pregenital segments of males and females. In both sexes, a robust rhythmic motor program was induced in pregenital segments by the same experimental methods used to elicit oviposition digging. The activity, recorded extracellularly, was oviposition-like in burst period (5-6 s) and homologous muscle phase relationships, and it persisted after sensory inputs were removed, indicating the presence of pregenital CPGs. The abdomen exhibited posterior-going waves of activity with an intersegmental phase delay of approximately 1 s. These results indicate that serially homologous motor systems, including functional CPGs, provided the foundation for the evolution of oviposition behavior.
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Affiliation(s)
- Karen J Thompson
- Department of Biology, Agnes Scott College, 141 E College Ave., Decatur, 30030, GA, USA.
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Takagi S, Cocanougher BT, Niki S, Miyamoto D, Kohsaka H, Kazama H, Fetter RD, Truman JW, Zlatic M, Cardona A, Nose A. Divergent Connectivity of Homologous Command-like Neurons Mediates Segment-Specific Touch Responses in Drosophila. Neuron 2017; 96:1373-1387.e6. [PMID: 29198754 DOI: 10.1016/j.neuron.2017.10.030] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Revised: 09/23/2017] [Accepted: 10/24/2017] [Indexed: 10/18/2022]
Abstract
Animals adaptively respond to a tactile stimulus by choosing an ethologically relevant behavior depending on the location of the stimuli. Here, we investigate how somatosensory inputs on different body segments are linked to distinct motor outputs in Drosophila larvae. Larvae escape by backward locomotion when touched on the head, while they crawl forward when touched on the tail. We identify a class of segmentally repeated second-order somatosensory interneurons, that we named Wave, whose activation in anterior and posterior segments elicit backward and forward locomotion, respectively. Anterior and posterior Wave neurons extend their dendrites in opposite directions to receive somatosensory inputs from the head and tail, respectively. Downstream of anterior Wave neurons, we identify premotor circuits including the neuron A03a5, which together with Wave, is necessary for the backward locomotion touch response. Thus, Wave neurons match their receptive field to appropriate motor programs by participating in different circuits in different segments.
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Affiliation(s)
- Suguru Takagi
- Department of Physics, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
| | | | - Sawako Niki
- Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Chiba 277-8561, Japan
| | - Dohjin Miyamoto
- Department of Physics, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
| | - Hiroshi Kohsaka
- Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Chiba 277-8561, Japan
| | - Hokto Kazama
- RIKEN Brain Science Institute, Saitama 351-0198, Japan
| | - Richard Doty Fetter
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - James William Truman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Marta Zlatic
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Albert Cardona
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Akinao Nose
- Department of Physics, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan; Department of Complexity Science and Engineering, Graduate School of Frontier Sciences, The University of Tokyo, Chiba 277-8561, Japan.
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Nunes-da-Fonseca R, Berni M, Tobias-Santos V, Pane A, Araujo HM. Rhodnius prolixus: From classical physiology to modern developmental biology. Genesis 2017; 55. [DOI: 10.1002/dvg.22995] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Revised: 11/10/2016] [Accepted: 11/10/2016] [Indexed: 12/20/2022]
Affiliation(s)
- Rodrigo Nunes-da-Fonseca
- Laboratório Integrado de Ciências Morfofuncionais; Núcleo em Ecologia e Desenvolvimento Socio-Ambiental de Macaé, Campus Macaé, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
- Laboratório de Biologia Molecular do Desenvolvimento Instituto de Ciências Biomédicas, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
| | - Mateus Berni
- Institute of Molecular Entomology; INCT-EM
- Laboratório de Biologia Molecular do Desenvolvimento Instituto de Ciências Biomédicas, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
| | - Vitória Tobias-Santos
- Laboratório Integrado de Ciências Morfofuncionais; Núcleo em Ecologia e Desenvolvimento Socio-Ambiental de Macaé, Campus Macaé, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
- Institute of Molecular Entomology; INCT-EM
| | - Attilio Pane
- Institute of Molecular Entomology; INCT-EM
- Laboratório de Biologia Molecular do Desenvolvimento Instituto de Ciências Biomédicas, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
| | - Helena Marcolla Araujo
- Institute of Molecular Entomology; INCT-EM
- Laboratório de Biologia Molecular do Desenvolvimento Instituto de Ciências Biomédicas, Federal University of Rio de Janeiro; Rio de Janeiro Brazil
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Abstract
The ability to image and manipulate specific cell populations in Drosophila enables the investigation of how neural circuits develop and coordinate appropriate motor behaviors. Gal4 lines give genetic access to many types of neurons, but the expression patterns of these reagents are often complex. Here, we present the generation and expression patterns of LexA lines based on the vesicular neurotransmitter transporters and Hox transcription factors. Intersections between these LexA lines and existing Gal4 collections provide a strategy for rationally subdividing complex expression patterns based on neurotransmitter or segmental identity.
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Affiliation(s)
- J H Simpson
- a Janelia Research Campus , Howard Hughes Medical Institute , Ashburn , VA , USA.,b Molecular, Cellular and Developmental Biology Department , University of California, Santa Barbara , Santa Barbara , CA , USA
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Thompson KJ, Jones AD, Miller SA. On the origin of grasshopper oviposition behavior: structural homology in pregenital and genital motor systems. BRAIN, BEHAVIOR AND EVOLUTION 2014; 83:247-65. [PMID: 24903559 DOI: 10.1159/000360932] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2013] [Accepted: 02/26/2014] [Indexed: 11/19/2022]
Abstract
In female grasshoppers, oviposition is a highly specialized behavior involving a rhythm-generating neural circuit, the oviposition central pattern generator, unusual abdominal appendages, and dedicated muscles. This study of Schistocerca americana (Drury) grasshoppers was undertaken to determine whether the simpler pregenital abdominal segments, which do not contain ovipositor appendages, share common features with the genital segment, suggesting a roadmap for the genesis of oviposition behavior. Our study revealed that although 5 of the standard pregenital body wall muscles were missing in the female genital segment, homologous lateral nerves were, indeed, present and served 4 ovipositor muscles. Retrograde labeling of the corresponding pregenital nerve branches in male and female grasshoppers revealed motor neurons, dorsal unpaired median neurons, and common inhibitor neurons which appear to be structural homologues of those filled from ovipositor muscles. Some pregenital motor neurons displayed pronounced contralateral neurites; in contrast, some ovipositor motor neurons were exclusively ipsilateral. Strong evidence of structural homology was also obtained for pregenital and ovipositor skeletal muscles supplied by the identified neurons and of the pregenital and ovipositor skeletons. For example, transient embryonic segmental appendages were maintained in the female genital segments, giving rise to ovipositor valves, but were lost in pregenital abdominal segments. Significant proportional differences in sternal apodemes and plates were observed, which partially obscure the similarities between the pregenital and genital skeletons. Other changes in reorganization included genital muscles that displayed adult hypertrophy, 1 genital muscle that appeared to represent 2 fused pregenital muscles, and the insertion points of 2 ovipositor muscles that appeared to have been relocated. Together, the comparisons support the idea that the oviposition behavior of genital segments is built upon a homologous, segmentally iterated motor infrastructure located in the pregenital abdomen of male and female grasshoppers.
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Lovick JK, Ngo KT, Omoto JJ, Wong DC, Nguyen JD, Hartenstein V. Postembryonic lineages of the Drosophila brain: I. Development of the lineage-associated fiber tracts. Dev Biol 2013; 384:228-57. [PMID: 23880429 DOI: 10.1016/j.ydbio.2013.07.008] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2013] [Revised: 07/11/2013] [Accepted: 07/11/2013] [Indexed: 11/16/2022]
Abstract
Neurons of the Drosophila central brain fall into approximately 100 paired groups, termed lineages. Each lineage is derived from a single asymmetrically-dividing neuroblast. Embryonic neuroblasts produce 1,500 primary neurons (per hemisphere) that make up the larval CNS followed by a second mitotic period in the larva that generates approximately 10,000 secondary, adult-specific neurons. Clonal analyses based on previous works using lineage-specific Gal4 drivers have established that such lineages form highly invariant morphological units. All neurons of a lineage project as one or a few axon tracts (secondary axon tracts, SATs) with characteristic trajectories, thereby representing unique hallmarks. In the neuropil, SATs assemble into larger fiber bundles (fascicles) which interconnect different neuropil compartments. We have analyzed the SATs and fascicles formed by lineages during larval, pupal, and adult stages using antibodies against membrane molecules (Neurotactin/Neuroglian) and synaptic proteins (Bruchpilot/N-Cadherin). The use of these markers allows one to identify fiber bundles of the adult brain and associate them with SATs and fascicles of the larval brain. This work lays the foundation for assigning the lineage identity of GFP-labeled MARCM clones on the basis of their close association with specific SATs and neuropil fascicles, as described in the accompanying paper (Wong et al., 2013. Postembryonic lineages of the Drosophila brain: II. Identification of lineage projection patterns based on MARCM clones. Submitted.).
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Affiliation(s)
- Jennifer K Lovick
- Department of Molecular Cell and Developmental Biology, University of California, Los Angeles, 610 Charles E. Young Drive, 5009 Terasaki Life Sciences Bldg, Los Angeles, CA 90095, USA
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