Controlling fracture cascades through twisting and quenching

An RNA origami robot that traps and releases a fluorescent aptamer

RNA nanotechnology aims to use RNA as a programmable material to create self-assembling nanodevices for application in medicine and synthetic biology. The main challenge is to develop advanced RNA robotic devices that both sense, compute, and actuate to obtain enhanced control over molecular processes. Here, we use the RNA origami method to prototype an RNA robotic device, named the "Traptamer," that mechanically traps the fluorescent aptamer, iSpinach. The Traptamer is shown to sense two RNA key strands, acts as a Boolean AND gate, and reversibly controls the fluorescence of the iSpinach aptamer. Cryo-electron microscopy of the closed Traptamer structure at 5.45-angstrom resolution reveals the mechanical mode of distortion of the iSpinach motif. Our study suggests a general approach to distorting RNA motifs and a path forward to build sophisticated RNA machines that through sensing, computing, and actuation modules can be used to precisely control RNA functionalities in cellular systems.

Towards Further Understanding the Secondary Fracture during Spaghetti Bent Break

When a brittle thin rod, such as a dry spaghetti stick, is bent beyond its flexural limit, it often breaks into more than two pieces, typically three or more. This phenomenon and puzzle has aroused widespread interest and discussion since its first proposal by Feynman. Previous work has partly explained the inevitability of the secondary fracture, but without any adjustable time parameter. In order to further understand this problem, especially the secondary fracture, in this paper we propose and study the dynamics of a half-infinite model to mimic the physics that a spaghetti stick is half-infinite under uniform bending. When the breaking process starts, a gradual release of initial moment of a linearly declining time at the free end, instead of a sudden release, is adopted, resulting in the introduction of a characteristic time parameter to the model and agrees better with the real situation. A specific analytical solution in terms of the excited bending moment using Euler–Bernoulli beam theory is derived, and that the gradual release of initial moment induces a burst of flexural waves, and these flexural waves locally increase the moment in the stick and progressively get to the maximum value, and then lead to the secondary fracture are concluded. The excited moment increases with time and distance, and has an asymptotic extremum value of 1.43 times initial moment. The gradual release in our model requires and gives certain distance and time when the excited bending moment reaches its extremum value, which provides a possibility to predict the detailed fracture parameters such as fragmentation length and time and thus to further understand the secondary fracture during spaghetti bent break.

Nonlinear buckling behavior of a complete spherical shell under uniform external pressure and homogenous natural curvature

In this work, we consider the stability of a spherical shell under combined loading from a uniform external pressure and a homogenous natural curvature. Nonmechanical stimuli, such as one that tends to modify the rest curvature of an elastic body, are prevalent in a wide range of natural and engineered systems, and may occur due to thermal expansion, changes in pH, differential swelling, and differential growth. Here we investigate how the presence of both an evolving natural curvature and an external pressure modifies the stability of a complete spherical shell. We show that due to a mechanical analogy between pressure and curvature, positive natural curvatures can severely destabilize a thin shell, while negative natural curvatures can strengthen the shell against buckling, providing the possibility to design shells that buckle at or above the theoretical limit for pressure alone, i.e., a strengthening factor. These results extend directly from the classical analysis of the stability of shells under pressure, and highlight the important role that nonmechanical stimuli can have on modifying the membrane state of stress in a thin shell.