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Donoghue M, Wang H, O'Toole D, Connelly CE, Horie S, Woulfe P, Salinas C, King B, Tuohy B, Kiely E, Wanelik K, Sawhney K, Kleefeld C. Development of a nanometre scale X-ray speckle-based CT technique through the 3-D histological assessment of an acute respiratory distress syndrome model. Sci Rep 2024; 14:23745. [PMID: 39390031 PMCID: PMC11467383 DOI: 10.1038/s41598-024-72660-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Accepted: 09/09/2024] [Indexed: 10/12/2024] Open
Abstract
The study of biological soft tissue structures at the micron scale details the function of healthy and pathological tissues, which is vital in the diagnosis and treatment of diseases. Speckle based X-ray phase contrast tomographic scans at a nanometer scale have the potential to thoroughly analyse such tissues in a quantitative and qualitative manner. Diamond light source, the UKs national synchrotron facility developed and refined a 1-D X-ray speckle-based imaging technique, referred to as Fly scan mode. This novel image acquisition technique was used to perform a rapid structural composition scan of rodent lung histology samples. The rodent samples were taken from healthy and Staphylococcus aureus induced acute respiratory distress syndrome models. The analysis and cross comparison of the fly scan method, absorption-based tomography and conventional histopathology H&E staining microscopy are discussed in this paper. This analysis and cross comparison outline the ways the speckle-based technique can be of benefit. These advantages include improved soft tissue contrast, 3-D volumetric rendering, segmentation of specific gross tissue structures, quantitative analysis of gross tissue volume. A further advantage is the analysis of cellular distribution throughout the volumetric rendering of the tissue sample. The study also details the current limitations of this technique and points to ways in which future work on this imaging modality may progress.
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Affiliation(s)
- Matthew Donoghue
- Medical Physics Department, Blackrock Health Galway Clinic, Galway, Ireland.
| | - Hongchang Wang
- Diamond Light Source Ltd., Harwell Science and Innovation Campus, Didcot, UK.
| | - Daniel O'Toole
- Discipline of Anaesthesia, University of Galway, Galway, Ireland
| | | | - Shahd Horie
- Biological and Chemical Sciences, University of Galway, Galway, Ireland
| | - Peter Woulfe
- Medical Physics Department, Blackrock Health Galway Clinic, Galway, Ireland
| | - Cornelio Salinas
- School of Natural Sciences, Physics, University of Galway, Galway, Ireland
| | - Brid King
- Histology Department, Blackrock Health Galway Clinic, Galway, Ireland
| | - Brendan Tuohy
- Medical Physics Department, Galway University Hospitals, Galway, Ireland
| | - Evan Kiely
- Warwick Manufacturing Group, University of Warwick, Warwick, UK
| | - Kazimir Wanelik
- Diamond Light Source Ltd., Harwell Science and Innovation Campus, Didcot, UK
| | - Kawal Sawhney
- Diamond Light Source Ltd., Harwell Science and Innovation Campus, Didcot, UK
| | - Christoph Kleefeld
- School of Natural Sciences, Physics, University of Galway, Galway, Ireland
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Reply to Kagias and Stampanoni: High-sensitivity hard X-ray directional differential phase imaging. Proc Natl Acad Sci U S A 2021; 118:2116067118. [PMID: 34782478 PMCID: PMC8617419 DOI: 10.1073/pnas.2116067118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/05/2021] [Indexed: 11/18/2022] Open
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On the definition, utility, and practical implementation of X-ray omnidirectional differential phase contrast and dark-field imaging. Proc Natl Acad Sci U S A 2021; 118:2115565118. [PMID: 34782476 DOI: 10.1073/pnas.2115565118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/07/2021] [Indexed: 11/18/2022] Open
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Wang H, Moriconi S, Sawhney K. Nano-precision metrology of X-ray mirrors with laser speckle angular measurement. LIGHT, SCIENCE & APPLICATIONS 2021; 10:195. [PMID: 34552044 PMCID: PMC8458457 DOI: 10.1038/s41377-021-00632-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 08/16/2021] [Accepted: 09/03/2021] [Indexed: 05/25/2023]
Abstract
X-ray mirrors are widely used for synchrotron radiation, free-electron lasers, and astronomical telescopes. The short wavelength and grazing incidence impose strict limits on the permissible slope error. Advanced polishing techniques have already produced mirrors with slope errors below 50 nrad root mean square (rms), but existing metrology techniques struggle to measure them. Here, we describe a laser speckle angular measurement (SAM) approach to overcome such limitations. We also demonstrate that the angular precision of slope error measurements can be pushed down to 20nrad rms by utilizing an advanced sub-pixel tracking algorithm. Furthermore, SAM allows the measurement of mirrors in two dimensions with radii of curvature as low as a few hundred millimeters. Importantly, the instrument based on SAM is compact, low-cost, and easy to integrate with most other existing X-ray mirror metrology instruments, such as the long trace profiler (LTP) and nanometer optical metrology (NOM). The proposed nanometrology method represents an important milestone and potentially opens up new possibilities to develop next-generation super-polished X-ray mirrors, which will advance the development of X-ray nanoprobes, coherence preservation, and astronomical physics.
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Affiliation(s)
- Hongchang Wang
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK.
| | - Simone Moriconi
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK
- Department of Engineering Science, University of Oxford, Parks Road, Oxford, OX1 3PJ, UK
| | - Kawal Sawhney
- Diamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, OX11 0DE, UK
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