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For: Matsuura T, Hosoda K, Ichihashi N, Kazuta Y, Yomo T. Kinetic analysis of β-galactosidase and β-glucuronidase tetramerization coupled with protein translation. J Biol Chem 2011;286:22028-34. [PMID: 21531724 DOI: 10.1074/jbc.m111.240168] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
Number Cited by Other Article(s)
1
Pollack D, Nozoe T, Kussell E. Proteolytic stability and aggregation in a key metabolic enzyme of bacteria. Proc Natl Acad Sci U S A 2024;121:e2301458121. [PMID: 38683989 PMCID: PMC11087809 DOI: 10.1073/pnas.2301458121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 03/07/2024] [Indexed: 05/02/2024]  Open
2
Nakashima S, Sato R, Fukami T, Kudo T, Hashiba S, Morinaga G, Nakano M, Ludwig-Schwellinger E, Matsui A, Ishiguro N, Ebner T, Nakajima M. Characterization of Enzymes Involved in Nintedanib Metabolism in Humans. Drug Metab Dispos 2023;51:733-742. [PMID: 36927840 DOI: 10.1124/dmd.122.001113] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 02/03/2023] [Accepted: 03/08/2023] [Indexed: 03/18/2023]  Open
3
Zhu B, Qian C, Tang H, Kitaguchi T, Ueda H. Creating a Thermostable β-Glucuronidase Switch for Homogeneous Immunoassay by Disruption of Conserved Salt Bridges at Diagonal Interfaces. Biochemistry 2023;62:309-317. [PMID: 35849118 DOI: 10.1021/acs.biochem.2c00165] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
4
Berhanu S, Ueda T, Alix JH. The E. coli DnaK chaperone stimulates the α-complementation of β-galactosidase. J Basic Microbiol 2022;62:669-688. [PMID: 35289419 DOI: 10.1002/jobm.202100487] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Revised: 01/11/2022] [Accepted: 02/20/2022] [Indexed: 11/09/2022]
5
Santibáñez R, Garrido D, Martin AJM. Atlas: automatic modeling of regulation of bacterial gene expression and metabolism using rule-based languages. Bioinformatics 2021;36:5473-5480. [PMID: 33367504 PMCID: PMC8016457 DOI: 10.1093/bioinformatics/btaa1040] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 11/19/2020] [Accepted: 12/12/2020] [Indexed: 12/31/2022]  Open
6
Schlachter CR, McGee AC, Sitasuwan PN, Horvath GC, Karri NG, Lee LA, Tomashek JJ. Variants of glycosyl hydrolase family 2 β-glucuronidases have increased activity on recalcitrant substrates. Enzyme Microb Technol 2021;145:109742. [PMID: 33750535 DOI: 10.1016/j.enzmictec.2020.109742] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 12/18/2020] [Accepted: 12/23/2020] [Indexed: 11/29/2022]
7
2,5-Disubstituted thiadiazoles as potent β-glucuronidase inhibitors; Synthesis, in vitro and in silico studies. Bioorg Chem 2019;91:103126. [DOI: 10.1016/j.bioorg.2019.103126] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Revised: 07/05/2019] [Accepted: 07/11/2019] [Indexed: 01/31/2023]
8
Ogawa M, Uyeda A, Harada K, Sato Y, Kato Y, Watanabe H, Honda K, Matsuura T. Class III Polyphosphate Kinase 2 Enzymes Catalyze the Pyrophosphorylation of Adenosine-5'-Monophosphate. Chembiochem 2019;20:2961-2967. [PMID: 31206993 DOI: 10.1002/cbic.201900303] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Indexed: 11/09/2022]
9
In vitro synthesis of the human calcium transporter Letm1 within cell-sized liposomes and investigation of its lipid dependency. J Biosci Bioeng 2018;127:544-548. [PMID: 30503650 DOI: 10.1016/j.jbiosc.2018.11.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 10/21/2018] [Accepted: 11/01/2018] [Indexed: 01/18/2023]
10
Matsuura T, Hosoda K, Shimizu Y. Robustness of a Reconstituted Escherichia coli Protein Translation System Analyzed by Computational Modeling. ACS Synth Biol 2018;7:1964-1972. [PMID: 30004679 DOI: 10.1021/acssynbio.8b00228] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
11
Reduction of the Oxidative Stress Status Using Steviol Glycosides in a Fish Model (Cyprinus carpio). BIOMED RESEARCH INTERNATIONAL 2018;2017:2352594. [PMID: 28691017 PMCID: PMC5485310 DOI: 10.1155/2017/2352594] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2016] [Revised: 03/17/2017] [Accepted: 04/03/2017] [Indexed: 12/20/2022]
12
Błażejewska K, Kapusta M, Zielińska E, Tukaj Z, Chincinska IA. Mature Luffa Leaves (Luffa cylindrica L.) as a Tool for Gene Expression Analysis by Agroinfiltration. FRONTIERS IN PLANT SCIENCE 2017;8:228. [PMID: 28270826 PMCID: PMC5318407 DOI: 10.3389/fpls.2017.00228] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Accepted: 02/06/2017] [Indexed: 05/23/2023]
13
Paper-based colorimetric biosensor for antibiotics inhibiting bacterial protein synthesis. J Biosci Bioeng 2017;123:96-100. [DOI: 10.1016/j.jbiosc.2016.07.015] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2016] [Revised: 07/15/2016] [Accepted: 07/22/2016] [Indexed: 12/13/2022]
14
Stütz AE, Wrodnigg TM. Carbohydrate-Processing Enzymes of the Lysosome: Diseases Caused by Misfolded Mutants and Sugar Mimetics as Correcting Pharmacological Chaperones. Adv Carbohydr Chem Biochem 2016;73:225-302. [PMID: 27816107 DOI: 10.1016/bs.accb.2016.08.002] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
15
Sunami T, Ichihashi N, Nishikawa T, Kazuta Y, Yomo T. Effect of Liposome Size on Internal RNA Replication Coupled with Replicase Translation. Chembiochem 2016;17:1282-9. [DOI: 10.1002/cbic.201500662] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2015] [Indexed: 11/10/2022]
16
Soga H, Fujii S, Yomo T, Kato Y, Watanabe H, Matsuura T. In vitro membrane protein synthesis inside cell-sized vesicles reveals the dependence of membrane protein integration on vesicle volume. ACS Synth Biol 2014;3:372-9. [PMID: 24328098 DOI: 10.1021/sb400094c] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
17
Okano T, Matsuura T, Suzuki H, Yomo T. Cell-free protein synthesis in a microchamber revealed the presence of an optimum compartment volume for high-order reactions. ACS Synth Biol 2014;3:347-52. [PMID: 23991849 DOI: 10.1021/sb400087e] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
18
Hassan MI, Waheed A, Grubb JH, Klei HE, Korolev S, Sly WS. High resolution crystal structure of human β-glucuronidase reveals structural basis of lysosome targeting. PLoS One 2013;8:e79687. [PMID: 24260279 PMCID: PMC3834196 DOI: 10.1371/journal.pone.0079687] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Accepted: 09/24/2013] [Indexed: 11/19/2022]  Open
19
Naz H, Islam A, Waheed A, Sly WS, Ahmad F, Hassan MI. Humanβ-Glucuronidase: Structure, Function, and Application in Enzyme Replacement Therapy. Rejuvenation Res 2013;16:352-63. [DOI: 10.1089/rej.2013.1407] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open
20
In vitro evolution of α-hemolysin using a liposome display. Proc Natl Acad Sci U S A 2013;110:16796-801. [PMID: 24082135 DOI: 10.1073/pnas.1314585110] [Citation(s) in RCA: 105] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
21
Nishiyama K, Ichihashi N, Matsuura T, Kazuta Y, Yomo T. α-Complementation in an artificial genome replication system in liposomes. Chembiochem 2012. [PMID: 23193098 DOI: 10.1002/cbic.201200586] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
22
Matsuura T, Hosoda K, Kazuta Y, Ichihashi N, Suzuki H, Yomo T. Effects of compartment size on the kinetics of intracompartmental multimeric protein synthesis. ACS Synth Biol 2012;1:431-7. [PMID: 23651340 DOI: 10.1021/sb300041z] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
23
Directed Evolution of Proteins through In Vitro Protein Synthesis in Liposomes. J Nucleic Acids 2012;2012:923214. [PMID: 22957209 PMCID: PMC3431101 DOI: 10.1155/2012/923214] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2012] [Accepted: 07/10/2012] [Indexed: 11/17/2022]  Open
24
Okano T, Matsuura T, Kazuta Y, Suzuki H, Yomo T. Cell-free protein synthesis from a single copy of DNA in a glass microchamber. LAB ON A CHIP 2012;12:2704-2711. [PMID: 22622196 DOI: 10.1039/c2lc40098g] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
25
Nishikawa T, Sunami T, Matsuura T, Ichihashi N, Yomo T. Construction of a Gene Screening System Using Giant Unilamellar Liposomes and a Fluorescence-Activated Cell Sorter. Anal Chem 2012;84:5017-24. [DOI: 10.1021/ac300678w] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
26
Dang DT, Schill J, Brunsveld L. Cucurbit[8]uril-mediated protein homotetramerization. Chem Sci 2012. [DOI: 10.1039/c2sc20625k] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
27
Caschera F, Sunami T, Matsuura T, Suzuki H, Hanczyc MM, Yomo T. Programmed vesicle fusion triggers gene expression. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2011;27:13082-13090. [PMID: 21923099 DOI: 10.1021/la202648h] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
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