1
|
Wang Y, Fan A, Cohen RD, Dal Poggetto G, Huang Z, Yang H, Martin GE, Sherer EC, Reibarkh M, Wang X. Unequivocal identification of two-bond heteronuclear correlations in natural products at nanomole scale by i-HMBC. Nat Commun 2023; 14:1842. [PMID: 37012241 PMCID: PMC10070429 DOI: 10.1038/s41467-023-37289-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Accepted: 03/09/2023] [Indexed: 04/05/2023] Open
Abstract
HMBC is an essential NMR experiment for determining multiple bond heteronuclear correlations in small to medium-sized organic molecules, including natural products, yet its major limitation is the inability to differentiate two-bond from longer-range correlations. There have been several attempts to address this issue, but all reported approaches suffer various drawbacks, such as restricted utility and poor sensitivity. Here we present a sensitive and universal methodology to identify two-bond HMBC correlations using isotope shifts, referred to as i-HMBC (isotope shift detection HMBC). Experimental utility was demonstrated at the sub-milligram / nanomole scale with only a few hours of acquisition time required for structure elucidation of several complex proton-deficient natural products, which could not be fully elucidated by conventional 2D NMR experiments. Because i-HMBC overcomes the key limitation of HMBC without significant reduction in sensitivity or performance, i-HMBC can be used as a complement to HMBC when unambiguous identifications of two-bond correlations are needed.
Collapse
Affiliation(s)
- Yunyi Wang
- Analytical Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA
| | - Aili Fan
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing, 100191, P. R. China
| | - Ryan D Cohen
- Analytical Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA
| | | | - Zheng Huang
- Process Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA
| | - Haifeng Yang
- Process Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA
| | - Gary E Martin
- Department of Chemistry and Biochemistry, Seton Hall University, South Orange, NJ, 07079, USA
| | - Edward C Sherer
- Analytical Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA
| | - Mikhail Reibarkh
- Analytical Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA.
| | - Xiao Wang
- Analytical Research & Development, Merck & Co. Inc, Rahway, NJ, 07065, USA.
| |
Collapse
|
2
|
Haloui A, Haloui E. The rα structure of C6F5Br determined by 13C NMR in liquid crystal. Distortions of the C6F6 ring induced by single substitution. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.03.049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
3
|
Demaison J, Rudolph HD, Császár AG. Deformation of the benzene ring upon fluorination: equilibrium structures of all fluorobenzenes. Mol Phys 2013. [DOI: 10.1080/00268976.2013.793843] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Jean Demaison
- a Laboratoire de Physique des Lasers, Atomes et Molécules , Université de Lille I , France
| | | | - Attila G. Császár
- c Laboratory of Molecular Structure and Dynamics, Institute of Chemistry , Eötvös University , Budapest , Hungary
| |
Collapse
|
4
|
Haloui A, Haloui E. rα Structures of partially oriented pentafluorobenzenes C6F5X (X = H, Cl, I) as determined from 19F NMR spectra with 13C satellites. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2011; 49:717-724. [PMID: 21971998 DOI: 10.1002/mrc.2818] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2011] [Revised: 06/22/2011] [Accepted: 07/03/2011] [Indexed: 05/31/2023]
Abstract
The (19)F spectra with natural-abundance carbon-13 satellites of C(6)F(5)X (X = H, Cl or I) in ZLI 1695 liquid crystal were analysed. Excluding fluorine-fluorine dipolar coupling constants from the fitting, the vibrationally corrected structures of these molecules were derived and compared with those calculated at DFT/B3LYP level of theory with the aug-cc-pVTZ basis set. The results show that pentafluorobenzene did not exhibit noticeable distortion of the aromatic ring, while chloropentafluorobenzene and iodopentafluorobenzene molecules showed some deformations in their determined structures. Relative anisotropies of F-F couplings have been deduced with accuracy for C(6)F(5)H molecule. Due to uncertainties in structure determination of C(6)F(5)Cl and C(6)F(5)I molecules, it was not possible to obtain precise values for all the corresponding anisotropies. In addition, it was found that the orientation of these molecules in the solvent used can be qualitatively explained in terms of dispersion forces.
Collapse
Affiliation(s)
- Abir Haloui
- Department of Chemistry, Faculty of Sciences, Manar 2, 2092 Tunis, Tunisia.
| | | |
Collapse
|
5
|
Jokisaari J, Väänänen T, Lounila J. Therα-structure and orientational behaviour of monoiodobenzene in nematic liquid crystals. Mol Phys 2006. [DOI: 10.1080/00268978200100111] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
|
6
|
Lounila J, Väänänen T. Application of the extended least squares method an example within the field of N.M.R. spectroscopy of partially oriented molecules. Mol Phys 2006. [DOI: 10.1080/00268978300101591] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
|
7
|
CELEBRE BG, DE LUCA G, FERRARINI A. Short- and long-range contributions to the ordering of rigid planar solutes dissolved in a 55wt% ZLI1132+ EBBA nematic mixture. Mol Phys 1997. [DOI: 10.1080/002689797169664] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
|
8
|
Pulkkinen A, Jokisaari J, Väänänen T. 1Hand 19F NMR study with carbon-13 satellites of para-difluorobezene in various nematic liquid crystals: structure and J-coupling anisotropy. J Mol Struct 1986. [DOI: 10.1016/0022-2860(86)85014-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
9
|
Portalone G, Schultz G, Domenicano A, Hargittai I. Molecular structure and ring distortions of fluorobenzene: an electron diffraction study, and a comparison with other experimental and ab initio MO results. J Mol Struct 1984. [DOI: 10.1016/0022-2860(84)85179-0] [Citation(s) in RCA: 54] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|