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Cheng CY, Hwang LP. Dynamics and Orientation Ordering of Water in Lyotropic Liquid Crystals Using 2
H Double Quantum Filtered NMR Spectral Analysis. J CHIN CHEM SOC-TAIP 2013. [DOI: 10.1002/jccs.200100140] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Torrent M, Mansour D, Day EP, Morokuma K. Quantum Chemical Study on Oxygen-17 and Nitrogen-14 Nuclear Quadrupole Coupling Parameters of Peptide Bonds in α-Helix and β-Sheet Proteins. J Phys Chem A 2001. [DOI: 10.1021/jp004398x] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Maricel Torrent
- Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, and Department of Physics, Emory University, Atlanta, Georgia 30322
| | - Danielle Mansour
- Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, and Department of Physics, Emory University, Atlanta, Georgia 30322
| | - Edmund P. Day
- Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, and Department of Physics, Emory University, Atlanta, Georgia 30322
| | - Keiji Morokuma
- Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, and Department of Physics, Emory University, Atlanta, Georgia 30322
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3
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Coriani S, Halkier A, Jørgensen P, Gauss J, Christiansen O, Rizzo A. Coupled cluster investigation of Sternheimer shieldings and electric field gradient polarizabilities. J Chem Phys 2000. [DOI: 10.1063/1.481970] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Alfredsson M, Hermansson K. Hartree–Fock and DFT calculations of quadrupole coupling constants in water clusters and ice. Chem Phys 1999. [DOI: 10.1016/s0301-0104(99)00012-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Rizzo A, Ruud K, Helgaker T, Jaszuński M. Electric field gradient, generalized Sternheimer shieldings and electric field gradient polarizabilities by multiconfigurational SCF response. J Chem Phys 1998. [DOI: 10.1063/1.476794] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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7
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Moriarty NW, Karlström G. Electric field gradient of a water molecule in water. A combined quantum chemical and statistical mechanical treatment. Chem Phys Lett 1997. [DOI: 10.1016/s0009-2614(97)01072-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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8
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BACSKAY GB, BUCKINGHAM AD. Nuclear quadrupole coupling constants in alkali halide molecules: anab initioquantum chemical study. Mol Phys 1997. [DOI: 10.1080/002689797171283] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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de Dios AC, Oldfield E. Recent progress in understanding chemical shifts. SOLID STATE NUCLEAR MAGNETIC RESONANCE 1996; 6:101-125. [PMID: 8784950 DOI: 10.1016/0926-2040(95)01207-9] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
In the past three or four years computer hardware and software developments have reached the stage where the nuclear magnetic resonance (NMR) spectra of many molecular systems can now be accurately evaluated. Detailed analysis of chemical shifts may soon become a routine part of solid (and liquid) state NMR structure prediction in chemistry and biology, and this Article covers the development of the topic from its earliest beginnings.
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Affiliation(s)
- A C de Dios
- Department of Chemistry, University of Illinois, Urbana 61801, USA
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Bagno A, Scorrano G. Site of Ionization of Polyfunctional Bases and Acids. 2. Ab Initio Electric Field Gradients at Nitrogen, Oxygen, Phosphorus, and Sulfur in Neutral and Ionized Forms. ACTA ACUST UNITED AC 1996. [DOI: 10.1021/jp9518421] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Alessandro Bagno
- Centro CNR Meccanismi Reazioni Organiche, Dipartimento di Chimica Organica, Università di Padova, via Marzolo 1, 35131 Padova, Italy
| | - Gianfranco Scorrano
- Centro CNR Meccanismi Reazioni Organiche, Dipartimento di Chimica Organica, Università di Padova, via Marzolo 1, 35131 Padova, Italy
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11
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Ojamäe L, Hermansson K, Dovesi R, Roetti C, Saunders VR. Mechanical and molecular properties of ice VIII from crystal‐orbital ab initio calculations. J Chem Phys 1994. [DOI: 10.1063/1.466509] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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12
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Eggenberger R, Gerber S, Huber H, Searles D, Welker M. The use of molecular dynamics simulations withab initioSCF calculations for the determination of the oxygen-17 quadrupole coupling constant in liquid water. Mol Phys 1993. [DOI: 10.1080/00268979300102961] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Augspurger JD, Dykstra CE. Derivative Hartree–Fock approach to molecular Sternheimer shielding. Calculation of intermolecular influence on nuclear quadrupole coupling. J Chem Phys 1993. [DOI: 10.1063/1.465300] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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de Dios AC, Pearson JG, Oldfield E. Secondary and tertiary structural effects on protein NMR chemical shifts: an ab initio approach. Science 1993; 260:1491-6. [PMID: 8502992 DOI: 10.1126/science.8502992] [Citation(s) in RCA: 401] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Recent theoretical developments permit the prediction of 1H, 13C, 15N, and 19F nuclear magnetic resonance chemical shifts in proteins and offer new ways of analyzing secondary and tertiary structure as well as for probing protein electrostatics. For 13C, phi, psi torsion angles dominate shielding for C alpha and C beta, but the addition of hydrogen bonding and electrostatics gives even better accord with experiment. For 15NH, side chain (chi 1) torsion angles are also important, as are nearest neighbor sequence effects, whereas for 1HN, hydrogen bonding is particularly significant. For 19F, weak or long-range electrostatic fields dominate 19F shielding nonequivalencies. The ability to predict chemical shifts in proteins from known or test structures opens new avenues to structure refinement or determination, especially for condensed systems.
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Affiliation(s)
- A C de Dios
- Department of Chemistry, University of Illinois, Urbana-Champaign 61801
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15
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Methods for computing nuclear magnetic resonance chemical shielding in large systems. Multiple cluster and charge field approaches. Chem Phys Lett 1993. [DOI: 10.1016/0009-2614(93)85175-n] [Citation(s) in RCA: 79] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Eggenberger R, Gerber S, Huber H, Searles D, Welker M. Abinitiocalculation of the deuterium quadrupole coupling in liquid water. J Chem Phys 1992. [DOI: 10.1063/1.463749] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Quantum chemical study of the HCl molecule and its binary complexes with CO, C2H2, C2H4, PH3, H2S, HCN, H2O and NH3: Hydrogen bonding and its effect on the 35Cl nuclear quadrupole coupling constant. Chem Phys 1990. [DOI: 10.1016/0301-0104(90)80071-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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A quantum chemical study of the HBr and HCN…HBr molecules: The effects of hydrogen bonding on molecular properties. Chem Phys Lett 1989. [DOI: 10.1016/0009-2614(89)87219-7] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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20
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van Der Maarel J. A H, D, and 17O Nuclear magnetic relaxation study on the structure and dynamics of water in concentrated ZnCl2. ACTA ACUST UNITED AC 1989. [DOI: 10.1016/0022-2364(89)90269-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Cummins PL, Bacskay GB, Hush NS, Jönsson B. On the structure, lattice energy and 14N nuclear quadrupole coupling constant of solid HCN. Chem Phys Lett 1988. [DOI: 10.1016/0009-2614(88)80198-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Bacskay GB, Gready JE. Prediction and experimental comparison of deuterium quadrupole coupling constants in some bifluoride salts: An extreme example of symmetric hydrogen bonding in different crystalline environments. J Chem Phys 1988. [DOI: 10.1063/1.454031] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Cummins PL, Backsay GB, Hush NS. The effect of intermolecular interactions on the electric field gradients in solid ammonia, tetrazole and imidazole. Mol Phys 1987. [DOI: 10.1080/00268978700102141] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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