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Rasin P, Basheer SM, Haribabu J, Aneesrahman K, Manakkadan V, Vadakkedathu Palakkeezhillam VN, Bhuvanesh N, Echeverria C, Santibanez JF, Sreekanth A. Host-guest interactions of coumarin-based 1,2-pyrazole using analytical and computational methods: Paper strip-based detection, live cell imaging, logic gates and keypad lock applications. Heliyon 2024; 10:e24077. [PMID: 38234888 PMCID: PMC10792585 DOI: 10.1016/j.heliyon.2024.e24077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 12/19/2023] [Accepted: 01/03/2024] [Indexed: 01/19/2024] Open
Abstract
A novel Coumarin-based 1,2-pyrazole, HCPyTSC is synthesised and characterized. The chemosensor has been shown to have efficient colourimetric and fluorescence sensing capabilities for the quick and selective detection of fluoride and copper ions. At 376 and 430 nm, the HCPyTSC exhibits selective sensing for Cu2+ and F- ions. By examining the natural bond orbital (NBO) analysis and the potential energy curve (PES) of the ground state for the function of the C-H bond, it has been determined from the theoretical study at hand that the deprotonation was taken from the 'CH' proton of the pyrazole ring. For F- and Cu2+, the HCPyTSC detection limits were 4.62 nM and 15.36 nM, respectively. Similarly, the binding constants (Kb) for F- and Cu2+ ions in acetonitrile medium were found to be 2.06 × 105 M-1 and 1.88 × 105 M-1. Chemosensor HCPyTSC with and without F- and Cu2+ ions have an emission and absorption response that can imitate a variety of logic gates, including the AND, XOR, and OR gates. Additionally, a paper-based sensor strip with the HCPyTSC was created for use in practical, flexible F- sensing applications. The paper-based sensor was more effective in detecting F- than other anions. The effectiveness of HCPyTSC for the selective detection of F- in living cells as well as its cell permeability were examined using live-cell imaging in T24 cells.
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Affiliation(s)
- Puthiyavalappil Rasin
- Department of Chemistry, National Institute of Technology-Tiruchirappalli, Tamil Nadu, 620015, India
| | - Sabeel M. Basheer
- Department of Chemistry, National Institute of Technology-Tiruchirappalli, Tamil Nadu, 620015, India
- Dr. Sabeel M Basheer, Department of Chemistry, School of Advanced Sciences, VIT-AP University, 522 237, Andhra Pradesh, India
| | - Jebiti Haribabu
- ATACAMA-OMICS, Facultad de Medicine, Universidad de, Los Carreras 1579, 1532502, Copiapo, Chile
- Chennai Institute of Technology (CIT), Chennai 600069, India
| | - K.N. Aneesrahman
- Department of Chemistry, National Institute of Technology-Tiruchirappalli, Tamil Nadu, 620015, India
| | - Vipin Manakkadan
- Department of Chemistry, National Institute of Technology-Tiruchirappalli, Tamil Nadu, 620015, India
| | | | - Nattamai Bhuvanesh
- Department of Chemistry, Texas A & M University, College Station, TX 77842, USA
| | - Cesar Echeverria
- ATACAMA-OMICS, Facultad de Medicine, Universidad de, Los Carreras 1579, 1532502, Copiapo, Chile
| | - Juan F. Santibanez
- Institute for Medical Research, National Institute of the Republic of Serbia, University of Belgrade, Belgrade, Serbia
- Integrative Center for Biology and Applied Chemistry (CIBQA), Bernardo O'Higgins University, Santiago, Chile
| | - Anandaram Sreekanth
- Department of Chemistry, National Institute of Technology-Tiruchirappalli, Tamil Nadu, 620015, India
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Zhu H, Chen L, Sun B, Wang M, Li H, Stoddart JF, Huang F. Applications of macrocycle-based solid-state host-guest chemistry. Nat Rev Chem 2023; 7:768-782. [PMID: 37783822 DOI: 10.1038/s41570-023-00531-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/01/2023] [Indexed: 10/04/2023]
Abstract
Macrocyclic molecules have been used in various fields owing to their guest binding properties. Macrocycle-based host-guest chemistry in solution can allow for precise control of complex formation. Although solution-phase host-guest complexes are easily prepared, their limited stability and processability prevent widespread application. Extending host-guest chemistry from solution to the solid state results in complexes that are generally more robust, enabling easier processing and broadened applications. Macrocyclic compounds in the solid state can encapsulate guests with larger affinities than their soluble counterparts. This is crucial for use in applications such as separation science and devices. In this Review, we summarize recent progress in macrocycle-based solid-state host-guest chemistry and discuss the basic physical chemistry of these complexes. Representative macrocycles and their solid-state complexes are explored, as well as potential applications. Finally, perspectives and challenges are discussed.
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Affiliation(s)
- Huangtianzhi Zhu
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China
| | - Liya Chen
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China
| | - Bin Sun
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China
| | - Mengbin Wang
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China
| | - Hao Li
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China.
| | - J Fraser Stoddart
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China.
- Department of Chemistry, Northwestern University, Evanston, IL, USA.
- School of Chemistry, University of New South Wales, Sydney, New South Wales, Australia.
| | - Feihe Huang
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou, P. R. China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co., LTD Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, P. R. China.
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Su B, Yang D, Liu B, Liu Z, Yan T, Dong R, Huang A, Wang L, Ding L. Syntheses and Preferred Structure Elucidation of
N
‐heterocyclic Imine Nickel and Cobalt Catalysts for MMA Polymerization. ChemistrySelect 2022. [DOI: 10.1002/slct.202201544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Biyun Su
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Dou Yang
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Bo Liu
- Changqing Oilfield Company Institute of technology of the second oil production plant of PetroChina Qingyang 745100 China
| | - Zhijun Liu
- Production Technology Department Shaanxi Yanchang Petroleum Yan'an Energy Chemical Co., Ltd. Yan'an 727599 China
| | - Tingyu Yan
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Ranran Dong
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Aiyu Huang
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Li Wang
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
| | - Liqin Ding
- College of Chemistry and Chemical Engineering Xi'an Shiyou University Xi'an 710065 China
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Freire DM, Beeri D, Pota K, Johnston HM, Palacios P, Pierce BS, Sherman BD, Green KN. Hydrogen Peroxide Disproportionation with Manganese Macrocyclic Complexes of Cyclen and Pyclen. Inorg Chem Front 2020; 7:1573-1582. [PMID: 32457818 DOI: 10.1039/c9qi01509d] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The catalase family of enzymes, which include a variety with a binuclear manganese active site, mitigate the risk from reactive oxygen species by facilitating the disproportionation of hydrogen peroxide into molecular oxygen and water. In this work, hydrogen peroxide disproportionation using complexes formed between manganese and cyclen or pyclen were investigated due to the spectroscopic similarities with the native MnCAT enzyme. Potentiometric titrations were used to construct speciation diagrams that identify the manganese complex compositions at different pH values. Each complex behaves as a functional mimic of catalase enzymes. UV-visible spectroscopic investigations of the H2O2 decomposition reaction yielded information about the structure of the initial catalyst and intermediates that include monomeric and dimeric species. The results indicate that rigidity imparted by the pyridine ring of pyclen is a key factor in increased TON and TOF values measured compared to cyclen.
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Affiliation(s)
- David M Freire
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
| | - Debora Beeri
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
| | - Kristof Pota
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
| | - Hannah M Johnston
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
| | - Philip Palacios
- Department of Chemistry and Biochemistry, The University of Texas at Arlington, 700 Planetarium Place, Arlington, TX 76019
| | - Brad S Pierce
- Department of Chemistry and Biochemistry, University of Alabama, 250 Hackberry Lane, Box 870336 Tuscaloosa, AL 35487
| | - Benjamin D Sherman
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
| | - Kayla N Green
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W.Bowie, Fort Worth, TX 76129, United States
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Yepremyan A, Mekhail MA, Niebuhr BP, Pota K, Sadagopan N, Schwartz TM, Green KN. Synthesis of 12-Membered Tetra-aza Macrocyclic Pyridinophanes Bearing Electron-Withdrawing Groups. J Org Chem 2020; 85:4988-4998. [PMID: 32208700 DOI: 10.1021/acs.joc.0c00188] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The number of substituted pyridine pyridinophanes found in the literature is limited due to challenges associated with 12-membered macrocycle and modified pyridine synthesis. Most notably, the electrophilic character at the 4-position of pyridine in pyridinophanes presents a unique challenge for introducing electrophilic chemical groups. Likewise, of the few reported, most substituted pyridine pyridinophanes in the literature are limited to electron-donating functionalities. Herein, new synthetic strategies for four new macrocycles bearing the electron-withdrawing groups CN, Cl, NO2, and CF3 are introduced. Potentiometric titrations were used to determine the protonation constants of the new pyridinophanes. Further, the influence of such modifications on the chemical behavior is predicted by comparing the potentiometric results to previously reported systems. X-ray diffraction analysis of the 4-Cl substituted species and its Cu(II) complex are also described to demonstrate the metal binding nature of these ligands. DFT analysis is used to support the experimental findings through energy calculations and ESP maps. These new molecules serve as a foundation to access a range of new pyridinophane small molecules and applications in future work.
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Affiliation(s)
- Akop Yepremyan
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Magy A Mekhail
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Brian P Niebuhr
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Kristof Pota
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Nishanth Sadagopan
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Timothy M Schwartz
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
| | - Kayla N Green
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 W. Bowie, Fort Worth, Texas 76129, United States
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Green KN, Pota K, Tircsó G, Gogolák RA, Kinsinger O, Davda C, Blain K, Brewer SM, Gonzalez P, Johnston HM, Akkaraju G. Dialing in on pharmacological features for a therapeutic antioxidant small molecule. Dalton Trans 2019; 48:12430-12439. [PMID: 31342985 PMCID: PMC6863055 DOI: 10.1039/c9dt01800j] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The pyridinophane molecule L2 (3,6,9,15-tetraazabicyclo[9.3.1]penta-deca-1(15),11,13-trien-13-ol) has shown promise as a therapuetic for neurodegenerative diseases involving oxidative stress and metal ion misregulation. Protonation and metal binding stability constants with Mg2+, Ca2+, Cu2+, and Zn2+ ions were determined to further explore the therapeutic and pharmacological potential of this water soluble small molecule. These studies show that incorporation of an -OH group in position 4 of the pyridine ring decreases the pI values compared to cyclen and L1 (3,6,9,15-tetraazabicyclo[9.3.1]penta-deca-1(15),11,13-triene). Furthermore, this approach tunes the basicity of the tetra-aza macrocyclic ligand through the enhanced resonance stabilization of the -OH in position 4 and rigidity of the pyridine ring such that L2 has increased basicity compared to previously reported tetra-aza macrocycles. A metal binding preference for Cu2+, a redox cycling agent known to produce oxidative stress, indicates that this would be the in vivo metal target of L2. However, the binding constant of L2 with Cu2+ is moderated compared to cyclen due to the rigidity of the ligand and shows how ligand design can be used to tune metal selectivity. An IC50 = 298.0 μM in HT-22 neuronal cells was observed. Low metabolic liability was determined in both Phase I and II in vitro models. Throughout these studies other metal binding systems were used for comparison and as appropriate controls. The reactivity reported to date and pharmacological features described herein warrant further studies in vivo and the pursuit of L2 congeners using the knowledge that pyridine substitution in a pyridinophane can be used to tune the structure of the ligand and retain the positive therapeutic outcomes.
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Affiliation(s)
- Kayla N Green
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Kristof Pota
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Gyula Tircsó
- Department of Physical Chemistry, Faculty of Science and Technology, University of Debrecen, Egyetem tér 1, Debrecen, H-4010, Hungary
| | - Réka Anna Gogolák
- Department of Physical Chemistry, Faculty of Science and Technology, University of Debrecen, Egyetem tér 1, Debrecen, H-4010, Hungary
| | - Olivia Kinsinger
- Department of Biology, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA
| | - Collin Davda
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Kimberly Blain
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA. and Department of Biology, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA
| | - Samantha M Brewer
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Paulina Gonzalez
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Hannah M Johnston
- Department of Chemistry and Biochemistry, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA.
| | - Giridhar Akkaraju
- Department of Biology, Texas Christian University, 2950 S. Bowie, Fort Worth, TX 76129, USA
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Tseberlidis G, Demonti L, Pirovano V, Scavini M, Cappelli S, Rizzato S, Vicente R, Caselli A. Controlling Selectivity in Alkene Oxidation: Anion Driven Epoxidation or Dihydroxylation Catalysed by [Iron(III)(Pyridine‐Containing Ligand)] Complexes. ChemCatChem 2019. [DOI: 10.1002/cctc.201901045] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Giorgio Tseberlidis
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
| | - Luca Demonti
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
| | - Valentina Pirovano
- Department of Pharmaceutical Sciences General and Organic Chemistry Section “A. Marchesini”University of Milan Via Venezian 21 Milano 20133 Italy
| | - Marco Scavini
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
| | - Serena Cappelli
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
| | - Silvia Rizzato
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
| | - Rubén Vicente
- Departamento de Química Orgánica e Inorgánica and Instituto Universitario de Química Organometálica “Enrique Moles”Universidad de Oviedo c/ Julián Clavería 8 Oviedo 33007 Spain
| | - Alessandro Caselli
- Department of Chemistry and ISTM-CNR-MilanoUniversità degli Studi di Milano Via Golgi 19 Milano 20133 Italy
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Rastegarnia S, Pordel M, Allameh S. Synthesis, Characterization, and DFT Calculations of New Fluorescent Cu(II) Complexes of Heterocyclic Ligands. J STRUCT CHEM+ 2019. [DOI: 10.1134/s0022476619020082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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9
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Ramezani S, Pordel M, Davoodnia A. Synthesis, characterization and quantum-chemical investigations of new fluorescent heterocyclic Schiff-base ligands and their cobalt(II) complexes. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2018.09.050] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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