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Jevtovic V, Alshammari N, Latif S, Alsukaibi AKD, Humaidi J, Alanazi TYA, Abdulaziz F, Matalka SI, Pantelić NĐ, Marković M, Rakić A, Dimić D. Synthesis, Crystal Structure, Theoretical Calculations, Antibacterial Activity, Electrochemical Behavior, and Molecular Docking of Ni(II) and Cu(II) Complexes with Pyridoxal-Semicarbazone. Molecules 2022; 27:molecules27196322. [PMID: 36234859 PMCID: PMC9570950 DOI: 10.3390/molecules27196322] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Revised: 09/16/2022] [Accepted: 09/19/2022] [Indexed: 12/25/2022] Open
Abstract
New Ni (II) and Cu (II) complexes with pyridoxal-semicarbazone were synthesized and their structures were solved by X-ray crystallography. This analysis showed the bis-ligand octahedral structure of [Ni(PLSC-H)2]·H2O and the dimer octahedral structure of [Cu(PLSC)(SO4)(H2O)]2·2H2O. Hirshfeld surface analysis was employed to determine the most important intermolecular interactions in the crystallographic structures. The structures of both complexes were further examined using density functional theory and natural bond orbital analysis. The photocatalytic decomposition of methylene blue in the presence of both compounds was investigated. Both compounds were active toward E. coli and S. aureus, with a minimum inhibition concentration similar to that of chloramphenicol. The obtained complexes led to the formation of free radical species, as was demonstrated in an experiment with dichlorofluorescein-diacetate. It is postulated that this is the mechanistic pathway of the antibacterial and photocatalytic activities. Cyclic voltammograms of the compounds showed the peaks of the reduction of metal ions. A molecular docking study showed that the Ni(II) complex exhibited promising activity towards Janus kinase (JAK), as a potential therapy for inflammatory diseases, cancers, and immunologic disorders.
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Affiliation(s)
- Violeta Jevtovic
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Njood Alshammari
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Salman Latif
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | | | - Jamal Humaidi
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Tahani Y. A. Alanazi
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Fahad Abdulaziz
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Samah I. Matalka
- Department of Chemistry, College of Science, University of Hail, Ha’il 81451, Saudi Arabia
| | - Nebojša Đ. Pantelić
- Department of Chemistry and Biochemistry, Faculty of Agriculture, University of Belgrade, Nemanjina 6, 11080 Belgrade, Serbia
| | - Milica Marković
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
| | - Aleksandra Rakić
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
| | - Dušan Dimić
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
- Correspondence:
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Divalent cobalt and copper coordination complexes of κ2-N, O-derivatives of (Z)-1-R-2-(2′-oxazolin-2′-yl)-eth-1-en-1-ates: Structure and reactivity patterns. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2020.119959] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Pyridoxal based ONS and ONO vanadium(V) complexes: Structural analysis and catalytic application in organic solvent free epoxidation. ACTA ACUST UNITED AC 2015. [DOI: 10.1016/j.molcata.2015.03.016] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Puntus L, Zhuravlev K, Lyssenko K, Antipin M, Pekareva I. Luminescence and structural properties of lanthanide complexes of Schiff bases derived from pyridoxal and amino acids. Dalton Trans 2007:4079-88. [PMID: 17828370 DOI: 10.1039/b706020c] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Lanthanide complexes of Schiff bases (SBs) with 1:1 and 1:2 (M:Lig) stoichiometric ratios were prepared by condensation of pyridoxal (PL) and aspartic acid (Asp) or l-histidine (His), respectively, in the presence of the appropriate metal chloride as a templating agent. These complexes were studied by optical spectroscopy and single crystal X-ray diffraction techniques. Crystallographic studies of 1:1 ([Eu(PL-Asp)(H(2)O)(4)](H(2)O)) and 1:2 ([Eu(PL-His)(2)(H(2)O)(2)]Cl(H(2)O)(4)) complexes show that Eu(III) is eight-coordinate in both structures, in a distorted square antiprism environment formed by the phenolic oxygen of PL, the nitrogen atom of carbon-nitrogen double bond, oxygen atoms of the carboxylate groups of His or Asp, and oxygen atoms of the water molecules. The main species formed in aqueous solutions containing these SBs have been determined by analysis of the luminescence spectra, lifetimes of Eu(III) excited states and vibronic interaction as well as structural features of the Eu(III) coordination sphere. Possible tetradentate coordination function of SBs in aqueous solutions with relatively high concentrations as well as the potential application of the lanthanide SB complexes as new luminescence materials are discussed.
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Affiliation(s)
- Lada Puntus
- Laboratory of Molecular Nanoelectronics, Institute of Radio Engineering & Electronics, Russian Academy of Sciences, 11-7 Mokhovaya, Moscow, 125009, Russia.
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Knežević NŽ, Leovac VM, Jevtović VS, Grgurić-Šipka S, Sabo TJ. Platinum(IV) complex with pyridoxal semicarbazone. INORG CHEM COMMUN 2003. [DOI: 10.1016/s1387-7003(03)00041-8] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Ishida T, Manabe R, In Y, Takashima H, Kitamura K, Wakahara A. Copper(II) Ion-Catalyzed and Molecular Packing-Dependent Dimerization of Pyridoxal 5-Phosphate–Pyridoxamine 5-Phosphate Schiff Base as a Structural Model for in Vitro Transformation of Amino Acid by Pyridoxal 5-Phosphate: X-Ray Crystal Structural Investigation. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1999. [DOI: 10.1246/bcsj.72.947] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Ishida T, In Y, Hayashi C, Manabe R, Wakahara A. Characterization of an End Product in a Copper(II)-Mediated Nonenzymatic Reaction of Vitamin B6with Amino Acid: X-Ray Crystal Structure of a Dimer of Cu(II)·[Pyridoxal 5-Phosphate–Pyridoxamine 5-Phosphate Schiff Base]·7H2O. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1997. [DOI: 10.1246/bcsj.70.2375] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Melník M, Kabešová M, Dunaj-Jurčo M, Holloway CE. COPPER (II) COORDINATION COMPOUNDS: CLASSIFICATION AND ANALYSIS OF CRYSTALLOGRAPHIC AND STRUCTURAL DATA. J COORD CHEM 1997. [DOI: 10.1080/00958979708027956] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Single crystal ESR study of bis(N-benzylpyridoxaldiminato) copper(II). Radiat Phys Chem Oxf Engl 1993 1995. [DOI: 10.1016/0969-806x(94)e0050-s] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Yang K, Wang L, Wu J, Dong F. Synthesis, characterization, and antioxidative activity of new vitamin B6 triethanolamine rare earth (III) complexes. J Inorg Biochem 1993; 52:145-50. [PMID: 8254335 DOI: 10.1016/0162-0134(93)85031-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
A series of new vitamin B6 triethanolamine rare earth (III) complexes Re(PN)3(TEA)(NO3)2Cl (PN = pyridoxol; TEA = triethanolamine; Re = La1, Ce2, Pr3, Nd4, Sm5, Tb6, Dy7, Ho8, Er9, Y10), were synthesized and characterized by elemental analysis, molar conductance, TGA-DTA, UV, IR, and 1H NMR spectroscopic techniques. The suppression ratio of complexes for the hydroxyl radical (OH.) and the superoxide radical (O2-.) were determined, the results show that these complexes possess scavenging effects on OH. and O2(-.). In this paper we also discuss the effect of complex conc. for the suppression ratio on superoxide radical O2(-.).
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Affiliation(s)
- K Yang
- Department of Chemistry, Lanzhou University, P.R. China
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Yang K, Wang L, Wu J, Yang Z, Gao X. Synthesis, characterization, and antioxidative activity of vitamin B6 rare earth (III) complexes. J Inorg Biochem 1993; 52:151-5. [PMID: 8254336 DOI: 10.1016/0162-0134(93)85032-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
A series of vitamin B6 pyridoxol rare earth (III) complexes Re(PN)5Cl3. 6H2O (PN = pyridoxol; Re = La, Ce, Pr, Nd, Sm, Eu, Gd, Ho, Er, Y) were synthesized and characterized by elemental analysis, molar conductance, TGA-DTA, IR, and 1HNMR spectroscopic techniques. The antioxidative activity of complexes was determined, using the suppression ratio of activated oxygen as an indicator. The results show that the complexes have the scavenger effects for activated oxygen.
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Affiliation(s)
- K Yang
- Department of Chemistry, Lanzhou University, P.R. China
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Garnovskii AD, Nivorozhkin AL, Minkin VI. Ligand environment and the structure of schiff base adducts and tetracoordinated metal-chelates. Coord Chem Rev 1993. [DOI: 10.1016/0010-8545(93)85032-y] [Citation(s) in RCA: 394] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Mathews II, Manohar H. Crystallographic identification of a ‘stepped-cubane’ structure for the Cu4O4core in [Cu4L2(bipy)4(µ3-OH)2][ClO4]4(HL = 5-hydroxy-6-methylpyridine-3,4-dimethanol, bipy = 2,2′-bipyridine). ACTA ACUST UNITED AC 1991. [DOI: 10.1039/dt9910002139] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Pneumatikakis G, Yannopoulos A, Markopoulos I. Mono-vitamin B6 complexes of palladium(II) and their interactions with nucleosides. J Inorg Biochem 1989; 37:17-28. [PMID: 2794999 DOI: 10.1016/0162-0134(89)80025-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The interactions of potassium tetrachloropalladate(II) with the B6 vitamins pyridoxal, pyridoxine, and pyridoxamine in 1:1 molar ratio have been studied. From DMF solutions, the ionic trichloro (pyridoxal or pyridoxine) palladates(II) were isolated. Pyridoxamine, on the other hand, in aqueous solutions gave the dimeric complex bis [mu-chloro-pyridoxaminato-palladium(II)]. In the first two complexes, the ligands coordinated to palladium through their pyridine nitrogen while, in the last one, pyridoxamine acted as a chelating ligand through its phenolic oxygen and aminomethyl nitrogen. All three complexes reacted with nucleosides, yielding the complexes [Pd(PL)(Nucl)Cl2], [Pd(PN)(Nucl)Cl2], and [Pd(PM-H+)(Nucl)Cl], respectively. Those complexes with one ionizable N(1)H imino proton underwent deprotonation, and the new mixed ligand complexes [Pd(PL)(Nucl-H+)Cl], [Pd(PN)(Nucl-H+)], and [Pd(PM-H+)(Nucl-H+)] were formed. In all mixed ligand complexes, the B6 vitamins maintained their coordination modes. The nucleosides, on the other hand, exhibited their usual coordination sites, i.e., in the nondeprotonated complexes, purine nucleosides coordinated only through their N7 atom. In the deprotonated complexes, they acted as bidentate ligands and coordinated through their N7 and O6 atoms. All complexes were characterized with elemental analyses, conductivity measurements, and various spectroscopic techniques.
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