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Thakur M, Yadav V, Kumar Y, Pramanik A, Dubey KK. How to deal with xenobiotic compounds through environment friendly approach? Crit Rev Biotechnol 2024:1-20. [PMID: 38710611 DOI: 10.1080/07388551.2024.2336527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Accepted: 03/13/2024] [Indexed: 05/08/2024]
Abstract
Every year, a huge amount of lethal compounds, such as synthetic dyes, pesticides, pharmaceuticals, hydrocarbons, etc. are mass produced worldwide, which negatively affect soil, air, and water quality. At present, pesticides are used very frequently to meet the requirements of modernized agriculture. The Food and Agriculture Organization of the United Nations (FAO) estimates that food production will increase by 80% by 2050 to keep up with the growing population, consequently pesticides will continue to play a role in agriculture. However, improper handling of these highly persistent chemicals leads to pollution of the environment and accumulation in food chain. These effects necessitate the development of technologies to eliminate or degrade these pollutants. Degradation of these compounds by physical and chemical processes is expensive and usually results in secondary compounds with higher toxicity. The biological strategies proposed for the degradation of these compounds are both cost-effective and eco-friendly. Microbes play an imperative role in the degradation of xenobiotic compounds that have toxic effects on the environment. This review on the fate of xenobiotic compounds in the environment presents cutting-edge insights and novel contributions in different fields. Microbial community dynamics in water bodies, genetic modification for enhanced pesticide degradation and the use of fungi for pharmaceutical removal, white-rot fungi's versatile ligninolytic enzymes and biodegradation potential are highlighted. Here we emphasize the factors influencing bioremediation, such as microbial interactions and carbon catabolism repression, along with a nuanced view of challenges and limitations. Overall, this review provides a comprehensive perspective on the bioremediation strategies.
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Affiliation(s)
- Mony Thakur
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
| | - Vinod Yadav
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
| | - Yatin Kumar
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
| | - Avijit Pramanik
- Department of Microbiology, Central University of Haryana, Mahendergarh, India
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Satpati GG, Gupta S, Biswas RK, Choudhury AK, Kim JW, Davoodbasha M. Microalgae mediated bioremediation of polycyclic aromatic hydrocarbons: Strategies, advancement and regulations. CHEMOSPHERE 2023; 344:140337. [PMID: 37797901 DOI: 10.1016/j.chemosphere.2023.140337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 09/14/2023] [Accepted: 09/28/2023] [Indexed: 10/07/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are pervasive in the atmosphere and are one of the emerging pollutants that cause harmful effects in living systems. There are some natural and anthropogenic sources that can produce PAHs in an uncontrolled way. Several health hazards associated with PAHs like abnormality in the reproductive system, endocrine system as well as immune system have been explained. The mutagenic or carcinogenic effects of hydrocarbons in living systems including algae, vertebrates and invertebrates have been discussed. For controlling PAHs, biodegradation has been suggested as an effective and eco-friendly process. Microalgae-based biosorption and biodegradation resulted in the removal of toxic contaminants. Microalgae both in unialgal form and in consortium (with bacteria or fungi) performed good results in bioaccumulation and biodegradation. In the present review, we highlighted the general information about the PAHs, conventional versus advanced technology for removal. In addition microalgae based removal and toxicity is discussed. Furthermore this work provides an idea on modern scientific applications like genetic and metabolic engineering, nanomaterials-based technologies, artificial neural network (ANN), machine learning (ML) etc. As rapid and effective methods for bioremediation of PAHs. With several pros and cons, biological treatments using microalgae are found to be better for PAH removal than any other conventional technologies.
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Affiliation(s)
- Gour Gopal Satpati
- Department of Botany, Bangabasi Evening College, University of Calcutta, Kolkata- 700009, West Bengal, India.
| | - Shalini Gupta
- University School of Environment and Management, Guru Gobind Singh Indraprastha University, Dwarka, Delhi- 110078, India
| | - Rohan Kr Biswas
- Phycology Lab, Department of Botany, Ramakrishna Mission Vivekananda Centenary College, Rahara, Kolkata-700118, India
| | - Avik Kumar Choudhury
- Phycology Lab, Department of Botany, Ramakrishna Mission Vivekananda Centenary College, Rahara, Kolkata-700118, India
| | - Jung-Wan Kim
- Research Centre for Bio Material and Process Development, Incheon National Univeristy, Republic of Korea; Division of Bioengineering, Incheon National University, Incheon, 22012, Republic of Korea.
| | - MubarakAli Davoodbasha
- Research Centre for Bio Material and Process Development, Incheon National Univeristy, Republic of Korea; Centre for Surface Technology and Applications, Korea Aerospace University, Goyang, 10540, Republic of Korea; School of Life Sciences, B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, 600048, India.
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Zazouli MA, Ala A, Asghari S, Babanezhad E. Evaluation of Azolla filiculoides potential in pyrene and phenanthrene accumulation and phytoremediation in contaminated waters. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2023; 26:608-617. [PMID: 37705149 DOI: 10.1080/15226514.2023.2257314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/15/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are a serious threat to the health of the environment. This study investigated the potential of Azolla filiculoides for the uptake, accumulation, and biodegradation of phenanthrene and pyrene. A- filiculoides plants were treated with 10 and 30 mg L-1 concentrations of phenanthrene and pyrene for the experimental duration of ten days. Phenanthrene and pyrene concentrations were measured using the high-performance liquid chromatography (HPLC) technique. Identification of the intermediate by-products resulting from the biological degradation of PAHs was performed by gas chromatography-mass spectrometry (GC/MS). The quantities of phenanthrene and pyrene in the ten-day treatments with 10 and 30 mg L-1 were 0.007 and 0.011 mg g-1 FW, and 0.048 and 0.079 mg g-1 FW, respectively. The growth parameters in the plants such as fresh weight, dry weight and RFN as well as the content of photosynthetic pigment of the plant decreased significantly compared to the control sample (p < 0.05). Ten compounds were identified from the plant tissue during the decomposition of pyrene and phenanthrene, and none of the PAHs were identified in the aquatic environment. Therefore, the use of A-filiculoides for phytoremediation of water resources contaminated with PAHs is an effective and promising method.
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Affiliation(s)
- Mohammad Ali Zazouli
- Department of Environmental Health Engineering, Faculty of Public Health, Health Sciences Research Center, Mazandaran University of Medical Sciences, Sari, Iran
| | - Alireza Ala
- Department of Environmental Health Engineering, Health Sciences Research Center, Student Research Committee, Mazandaran University of Medical Sciences, Sari, Iran
| | - Somayeh Asghari
- Department of Environmental Health Engineering, Health Sciences Research Center, Student Research Committee, Mazandaran University of Medical Sciences, Sari, Iran
| | - Esmaeil Babanezhad
- Department of Environmental Health Engineering, Faculty of Public Health, Health Sciences Research Center, Mazandaran University of Medical Sciences, Sari, Iran
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Monga D, Kaur P, Singh B. Microbe mediated remediation of dyes, explosive waste and polyaromatic hydrocarbons, pesticides and pharmaceuticals. CURRENT RESEARCH IN MICROBIAL SCIENCES 2022; 3:100092. [PMID: 35005657 PMCID: PMC8717453 DOI: 10.1016/j.crmicr.2021.100092] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 11/16/2021] [Accepted: 12/08/2021] [Indexed: 01/30/2023] Open
Abstract
Environmental pollutants dyes, pesticides, pharmaceuticals, explosive waste and polyaromatic hydrocarbons. Environmental pollutants toxicity. Possible microbial biodegradation pathways of environmental pollutants.
Industrialization and human activities have led to serious effects on environment. With the progress taking place in the biodegradation field, it is important to summarize the latest advancement. In this review, we intend to provide insights on the recent progress on the biodegradation of environmental contaminants such as dyes, pesticides, pharmaceuticals, explosive waste and polyaromatic hydrocarbons by microorganisms. Along with the biodegradation of environmental contaminants, toxicity effects have also been discussed.
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Méndez García M, García de Llasera MP. A review on the enzymes and metabolites identified by mass spectrometry from bacteria and microalgae involved in the degradation of high molecular weight PAHs. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 797:149035. [PMID: 34303250 DOI: 10.1016/j.scitotenv.2021.149035] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 07/09/2021] [Accepted: 07/10/2021] [Indexed: 06/13/2023]
Abstract
High molecular weight PAHs (HMW PAHs) are dangerous pollutants widely distributed in the environment. The use of microorganisms represents an important tool for HMW PAHs bioremediation, so, the understanding of their biochemical pathways facilitates the development of biodegradation strategies. For this reason, the potential role of species of microalgae, bacteria, and microalga-bacteria consortia in the degradation of HMW PAHs is discussed. The identification of their metabolites, mostly by GC-MS and LC-MS, allows a better approach to the enzymes involved in the key steps of the metabolic pathways of HMW PAHs biodegradation. So, this review intends to address the proteomic research on enzyme activities and their involvement in regulating essential biochemical functions that help bacteria and microalgae in the biodegradation processes of HMW PAHs. It is noteworthy that, given that to the best of our knowledge, this is the first review focused on the mass spectrometry identification of the HMW PAHs metabolites; whereby and due to the great concern of the presence of HMW PAHs in the environment, this material could help the urgency of developing new bioremediation methods. The elucidation of the metabolic pathways of persistent pollutant degrading microorganisms should lead to a better knowledge of the enzymes involved, which could contribute to a very ecological route to the control of environmental contamination in the future.
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Affiliation(s)
- Manuel Méndez García
- Facultad de Química, Departamento de Química Analítica, Universidad Nacional Autónoma de México, Ciudad Universitaria, México, D. F. 04510, Mexico
| | - Martha Patricia García de Llasera
- Facultad de Química, Departamento de Química Analítica, Universidad Nacional Autónoma de México, Ciudad Universitaria, México, D. F. 04510, Mexico.
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Kottuparambil S, Park J. Anthracene phytotoxicity in the freshwater flagellate alga Euglena agilis Carter. Sci Rep 2019; 9:15323. [PMID: 31653882 PMCID: PMC6814832 DOI: 10.1038/s41598-019-51451-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Accepted: 09/28/2019] [Indexed: 12/28/2022] Open
Abstract
The freshwater flagellate alga Euglena agilis Carter was exposed to the polycyclic aromatic hydrocarbon (PAH) anthracene for 96 h under optimal photosynthetically active radiation (PAR), and responses of growth, photosynthetic pigment production, and photosynthetic efficiency were assessed. Anthracene reduced the growth rate (μ) and levels of chlorophyll a (Chl a), chlorophyll b (Chl b), and total carotenoids. The growth rate was more sensitive than photosynthetic parameters, with a median effective concentration (EC50) of 4.28 mg L-1. Between 5 and 15 mg L-1, anthracene inhibited the maximum quantum yield (Fv/Fm) of photosystem II (PSII) and the maximum photosynthetic electron transport rate through PSII (rETRmax) with EC50 values of 14.88 and 11.8 mg L-1, respectively. At all anthracene concentrations, intracellular reactive oxygen species (ROS) were elevated, indicating increased oxidative stress. Anthracene presumably reduced the PSII efficiency of photochemical energy regulation and altered the photochemistry through intracellular ROS formation. Acute exposure to PAHs may induce severe physiological changes in phytoplankton cells, which may influence vital ecological processes within the aquatic environments. Additionally, growth and Chl a content may serve as sensitive risk assessment parameters of anthracene toxicity in water management since EC50 values for both overlap with anthracene levels (8.3 mg L-1) permitted by the US Environmental Protection Agency (USEPA).
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Affiliation(s)
- Sreejith Kottuparambil
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Jihae Park
- Ghent University Global Campus, Songomunhwa-Ro, 119, Yeonsu-gu, Incheon, 21985, Republic of Korea.
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Borowik A, Wyszkowska J, Gałązka A, Kucharski J. Role of Festuca rubra and Festuca arundinacea in determinig the functional and genetic diversity of microorganisms and of the enzymatic activity in the soil polluted with diesel oil. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:27738-27751. [PMID: 31338761 PMCID: PMC6791909 DOI: 10.1007/s11356-019-05888-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 07/01/2019] [Indexed: 05/29/2023]
Abstract
The objective of this study was to analyze the effect of two grass species, i.e. red fescue (Festuca rubra) and tall fescue (F. arundinacea), on the functional and genetic diversity of soil-dwelling microorganisms and on the enzymatic activity of soil not polluted and polluted with diesel oil. Grasses were examined for their effectiveness in accelerating degradation of PAHs introduced into soil with diesel oil. A growing experiment was conducted in Kick-Brauckman pots. The soil not polluted and polluted with diesel oil (7 cm3 kg-1 d.m.) was determined for the count of bacteria, colony development index, ecophysiological diversity index, functional diversity (using Biolog system), genetic diversity of bacteria (using NGS), enzymatic activity, and content of hydrocarbons. Study results demonstrated disturbed homeostasis of soil. The toxic effect of diesel oil on grasses alleviate with time since soil pollution. The yield of the first swath of red fescue decreased by 98% and that of tall fescue by 92%, whereas the yields of the second swath decreased by 82% and 89%, and these of the third swath by 50% and 47%, respectively. Diesel oil diminished also the functional and genetic diversity of bacteria. The use of grasses significantly decreased contents of C6-C12 (gasoline total), C12-C35 mineral oils, BTEX (volatile aromatic hydrocarbons), and PAHs in the soil, as well as enabled restoring the microbiological equilibrium in the soil, and increased functional and genetic diversity of bacteria. For this reason, both analyzed grass species, i.e. Festuca rubra and F. arundinacea, may be recommended for the remediation of soil polluted with diesel oil.
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Affiliation(s)
- Agata Borowik
- Department of Microbiology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727, Olsztyn, Poland
| | - Jadwiga Wyszkowska
- Department of Microbiology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727, Olsztyn, Poland.
| | - Anna Gałązka
- Institute of Soil Science and Plant Cultivation - State Research Institute, ul. Czartoryskich 8, 24-100, Puławy, Poland
| | - Jan Kucharski
- Department of Microbiology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727, Olsztyn, Poland
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Kadri T, Magdouli S, Rouissi T, Brar SK, Daghrir R, Lauzon JM. Bench-scale production of enzymes from the hydrocarbonoclastic bacteria Alcanivorax borkumensis and biodegradation tests. J Biotechnol 2018; 283:105-114. [PMID: 30071247 DOI: 10.1016/j.jbiotec.2018.07.039] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Revised: 07/24/2018] [Accepted: 07/29/2018] [Indexed: 11/30/2022]
Abstract
This study investigates motor oil (3, 5, 7.5 and 10% (v v-1)) as a sole carbon source for the production of Alcanivorax borkumensis in shake flasks and a 5 L bench-scale fermenter in comparison to the standard media. Shake flask studies showed a significant and higher cell growth (p=0.000038), lipase (p = 0.006900) and alkane hydroxylase production (p = 0.000921) by Alcanivorax borkumensis when motor oil was used as the substrate. Based on Tukey post-hoc tests, 5% motor oil concentration was selected as the optimal substrate concentration. The 5 L fermenter experiments conducted using motor oil at 5% (v v-1) concentration, under controlled conditions exhibited significant and higher alkane hydroxylase and lipase activities (55.6 U mL-1 (p = 0.018418) and 208.30 U mL-1 (p = 0.020087), respectively) as compared with those of motor oil at 3% (v v-1) and n-hexadecane at 3% (v v-1) concentration which was used as control. Cell growth was significantly higher when motor oil (3 or 5%) was used as a substrate (p = 0.024705). Enzymatic degradation tested on two different polycyclic aromatic hydrocarbons (PAHs) contaminated groundwaters showed 37.4% removal after 5 days with a degradation rate of 196.6 ppb day-1 and 82.8% removal after 10 days with a degradation rate of 217.54 ppb day-1 for the 1st site and an almost complete biodegradation with 95% removal and 499.02 ppb day-1 removal rate after only 5 days for the 2nd site.
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Affiliation(s)
- Tayssir Kadri
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Sara Magdouli
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Tarek Rouissi
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada
| | - Satinder Kaur Brar
- INRS-ETE, Université du Québec, 490, Rue de la Couronne, Québec, G1K 9A9, Canada.
| | - Rimeh Daghrir
- 696, avenue Sainte Croix, Montréal, Québec, H4L 3Y2, Canada
| | - Jean-Marc Lauzon
- TechnoRem Inc., 4701, rue Louis-B.-Mayer, Laval, Québec, H7P 6G5, Canada
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Borowik A, Wyszkowska J, Wyszkowski M. Resistance of aerobic microorganisms and soil enzyme response to soil contamination with Ekodiesel Ultra fuel. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017; 24:24346-24363. [PMID: 28890995 PMCID: PMC5655587 DOI: 10.1007/s11356-017-0076-1] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 09/01/2017] [Indexed: 05/04/2023]
Abstract
This study determined the susceptibility of cultured soil microorganisms to the effects of Ekodiesel Ultra fuel (DO), to the enzymatic activity of soil and to soil contamination with PAHs. Studies into the effects of any type of oil products on reactions taking place in soil are necessary as particular fuels not only differ in the chemical composition of oil products but also in the composition of various fuel improvers and antimicrobial fuel additives. The subjects of the study included loamy sand and sandy loam which, in their natural state, have been classified into the soil subtype 3.1.1 Endocalcaric Cambisols. The soil was contaminated with the DO in amounts of 0, 5 and 10 cm3 kg-1. Differences were noted in the resistance of particular groups or genera of microorganisms to DO contamination in loamy sand (LS) and sandy loam (SL). In loamy sand and sandy loam, the most resistant microorganisms were oligotrophic spore-forming bacteria. The resistance of microorganisms to DO contamination was greater in LS than in SL. It decreased with the duration of exposure of microorganisms to the effects of DO. The factor of impact (IFDO) on the activity of particular enzymes varied. For dehydrogenases, urease, arylsulphatase and β-glucosidase, it had negative values, while for catalase, it had positive values and was close to 0 for acid phosphatase and alkaline phosphatase. However, in both soils, the noted index of biochemical activity of soil (BA) decreased with the increase in DO contamination. In addition, a positive correlation occurred between the degree of soil contamination and its PAH content.
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Affiliation(s)
- Agata Borowik
- Department of Microbiology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
| | - Jadwiga Wyszkowska
- Department of Microbiology, University of Warmia and Mazury in Olsztyn, Plac Łódzki 3, 10-727 Olsztyn, Poland
| | - Mirosław Wyszkowski
- Department of Environmental Chemistry, University of Warmia and Mazury in Olsztyn, Plac Łódzki 4, 10-727 Olsztyn, Poland
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Sukhdhane KS, Pandey PK, Ajima MNO, Jayakumar T, Vennila A, Raut SM. Isolation and Characterization of Phenanthrene-Degrading Bacteria from PAHs Contaminated Mangrove Sediment of Thane Creek in Mumbai, India. Polycycl Aromat Compd 2017. [DOI: 10.1080/10406638.2016.1261911] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- K. S. Sukhdhane
- Fishery Environment and Management Division, Veraval Regional Centre of Central Marine Fisheries Research Institute, Veraval, India
| | - P. K. Pandey
- Aquatic Environment and Health Management Division, Central Institute of Fisheries Education, Mumbai, India
| | - M. N. O. Ajima
- Aquatic Environment and Health Management Division, Central Institute of Fisheries Education, Mumbai, India
- Department of Fisheries and Aquaculture Technology, Federal University of Technology, Owerri, Nigeria
| | - T. Jayakumar
- Aquatic Environment and Health Management Division, Central Institute of Fisheries Education, Mumbai, India
| | - A. Vennila
- Department of Soil Science and Soil Nutrition, Sugarcane Breeding Institute, Coimbatore, India
| | - S. M. Raut
- Aquatic Environment and Health Management Division, Central Institute of Fisheries Education, Mumbai, India
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Ghosal D, Ghosh S, Dutta TK, Ahn Y. Current State of Knowledge in Microbial Degradation of Polycyclic Aromatic Hydrocarbons (PAHs): A Review. Front Microbiol 2016; 7:1369. [PMID: 27630626 PMCID: PMC5006600 DOI: 10.3389/fmicb.2016.01369] [Citation(s) in RCA: 238] [Impact Index Per Article: 29.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Accepted: 08/18/2016] [Indexed: 12/22/2022] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) include a group of organic priority pollutants of critical environmental and public health concern due to their toxic, genotoxic, mutagenic and/or carcinogenic properties and their ubiquitous occurrence as well as recalcitrance. The increased awareness of their various adverse effects on ecosystem and human health has led to a dramatic increase in research aimed toward removing PAHs from the environment. PAHs may undergo adsorption, volatilization, photolysis, and chemical oxidation, although transformation by microorganisms is the major neutralization process of PAH-contaminated sites in an ecologically accepted manner. Microbial degradation of PAHs depends on various environmental conditions, such as nutrients, number and kind of the microorganisms, nature as well as chemical property of the PAH being degraded. A wide variety of bacterial, fungal and algal species have the potential to degrade/transform PAHs, among which bacteria and fungi mediated degradation has been studied most extensively. In last few decades microbial community analysis, biochemical pathway for PAHs degradation, gene organization, enzyme system, genetic regulation for PAH degradation have been explored in great detail. Although, xenobiotic-degrading microorganisms have incredible potential to restore contaminated environments inexpensively yet effectively, but new advancements are required to make such microbes effective and more powerful in removing those compounds, which were once thought to be recalcitrant. Recent analytical chemistry and genetic engineering tools might help to improve the efficiency of degradation of PAHs by microorganisms, and minimize uncertainties of successful bioremediation. However, appropriate implementation of the potential of naturally occurring microorganisms for field bioremediation could be considerably enhanced by optimizing certain factors such as bioavailability, adsorption and mass transfer of PAHs. The main purpose of this review is to provide an overview of current knowledge of bacteria, halophilic archaea, fungi and algae mediated degradation/transformation of PAHs. In addition, factors affecting PAHs degradation in the environment, recent advancement in genetic, genomic, proteomic and metabolomic techniques are also highlighted with an aim to facilitate the development of a new insight into the bioremediation of PAH in the environment.
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Affiliation(s)
- Debajyoti Ghosal
- Environmental Engineering Laboratory, Department of Civil Engineering, Yeungnam UniversityGyeongsan, South Korea
| | - Shreya Ghosh
- Disasters Prevention Research Institute, Yeungnam UniversityGyeongsan, South Korea
| | - Tapan K. Dutta
- Department of Microbiology, Bose InstituteKolkata, India
| | - Youngho Ahn
- Environmental Engineering Laboratory, Department of Civil Engineering, Yeungnam UniversityGyeongsan, South Korea
- Disasters Prevention Research Institute, Yeungnam UniversityGyeongsan, South Korea
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