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Akhtar A, Danish M, Asif A, Arshad MN, Asiri AM. Docking assisted DNA-binding, biological screening, and nuclease activity of copper complexes derived from sulfonamides. J COORD CHEM 2021. [DOI: 10.1080/00958972.2021.1931687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Arusa Akhtar
- Department of Chemistry, University of Gujrat, Gujrat, Pakistan
| | - Muhammad Danish
- Department of Chemistry, University of Gujrat, Gujrat, Pakistan
| | - Awais Asif
- Department of Biochemistry, Nawaz Sharif Medical College, University of Gujrat, Gujrat, Pakistan
| | - Muhammad Nadeem Arshad
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Center of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, Jeddah, Saudi Arabia
| | - Abdullah M. Asiri
- Chemistry Department, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia
- Center of Excellence for Advanced Materials Research (CEAMR), King Abdulaziz University, Jeddah, Saudi Arabia
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Vidyavathi GT, Vinay Kumar B, Aravinda T, Hani U. Cashew nutshell liquid catalyzed green chemistry approach for synthesis of a Schiff base and its divalent metal complexes: molecular docking and DNA reactivity. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2021; 40:264-287. [PMID: 33402026 DOI: 10.1080/15257770.2020.1868502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Cashew Nut Shell Liquid (CNSL) anacardic acid was used, for the first time, as a green and natural effective catalyst for the synthesis of a quinoline based amino acid Schiff base ligand from the condensation of 2-hydroxyquinoline-3-carbaldehyde with l-tryptophan via solvent-free simple physical grinding technique. The use of the nontoxic CNSL natural catalyst has many benefits over toxic reagents and the desired product was obtained in high yield in a short reaction time. The procedure employed is simple and does not involve column chromatography. Moreover, a series of metal(II) complexes (metal = iron(II), cobalt(II), nickel(II), and copper(II)) supported by the synthesized new quinoline based amino acid Schiff base ligand (L) has been designed and the compositions of the metal(II) complexes were examined by various analytical techniques. The findings imply that the 2-hydroxyquinoline-3-carbaldehyde amino acid Schiff base (L) serves as a dibasic tridentate ONO ligand and synchronizes with the metal(II) in octahedral geometry in accordance with the general formula [M(LH)2]. Molecular docking study of the metal(II) complexes with B-DNA dodecamer has revealed good binding energy. The conductivity parameters in DMSO suggest the existence of nonelectrolyte species. The interaction of these metal complexes with CT-DNA has shown strong binding via an intercalative mode with a different pattern of DNA binding, while UV-visible photo-induced molecular cleavage analysis against plasmid DNA using agarose gel electrophoresis has revealed that the metal complexes exhibit photo induced nuclease activity.
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Affiliation(s)
- G T Vidyavathi
- Department of Chemistry, RNS Institute of Technology, Channasandra, Bengaluru, Karnataka, India
| | - B Vinay Kumar
- Department of Chemistry, RNS Institute of Technology, Channasandra, Bengaluru, Karnataka, India
| | - T Aravinda
- Department of Chemistry, NITTE Meenakshi Institute of Technology, Yelahanka, Bengaluru, Karnataka, India
| | - U Hani
- Department of Biotechnology, Kuvempu University, Shankaraghatta, Shivamogga, Karnataka, India
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Lamani DS, Badiger SG, Venugopala Reddy KR, Bhojya Naik HS. Macrocyclic complexes: synthesis, characterization, antitumor and DNA binding studies. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2018; 37:498-517. [PMID: 30188769 DOI: 10.1080/15257770.2018.1498515] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The present paper deals with the synthesis of novel macrocyclic complexes of the type [MLX]X, where [(M = Co(II) (1), and Ni(II) (2) X = (Cl2)]. The complexes are synthesized by the reaction of ligand(L)diquinolineno[1,3,7,9]tetraazacyclododecine-7,15-ethane(14H,16H)-benzene with the corresponding metal salts. The synthesized complexes are thoroughly characterized by elemental analysis, FT-IR, 1H-NMR, Mass and electronic spectra. The complexes (1) and (2) were evaluated for in vitro cytotoxicity against human breast adenocarcinoma cell (MCF-7). MTT cytotoxicity studies shows both the complexes are most effective. The binding properties of these complexes with calf thymus-DNA were studied by absorption, emission spectra, viscosity measurements, and thermal denaturation studies. On binding to CT-DNA, the absorption spectrum undergoes bathochromic and hypochromic shifts. The absorption spectral results indicate that the intrinsic binding constant (Kb) are 4.8 × 105 M-1 for (1) and 3.9 × 105 M-1 for (2) respectively, suggesting that complex (1) binds more strongly to CT-DNA than complex (2). The viscosity measurement results revealed the viscosity of sonicated rod like DNA fragments increased when the complex was added to the solution of CT-DNA. The synthesized ligand and its metal complexes are screened for antibacterial and antifungal activities.
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Affiliation(s)
- Devappa S Lamani
- a Department of Chemistry , Basaveshawar Science College, Rani Channamma University , Bagalkot , Karnataka , India
| | - S G Badiger
- a Department of Chemistry , Basaveshawar Science College, Rani Channamma University , Bagalkot , Karnataka , India
| | - K R Venugopala Reddy
- b Department of Chemistry , Industrial Chemistry VSK University , Bellari , India
| | - H S Bhojya Naik
- c Department of Studies in Industrial Chemistry, School of Chemical Science , Jnana Sahyadri Kuvempu University , Shankaraghatta , Karnataka , India
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Novel iron phenanthroline-based photosensitizers for antimicrobial PDT: synthesis, DNA binding and photo-induced DNA cleavage activity. Med Chem Res 2017. [DOI: 10.1007/s00044-017-1831-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Sudhamani CN, Bhojya Naik HS, Sangeetha Gowda KR, Giridhar M, Girija D, Prashanth Kumar PN. Synthesis, DNA interactions and antibacterial PDT of Cu(II) complexes of phenanthroline based photosensitizers via singlet oxygen generation. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 138:780-788. [PMID: 25544194 DOI: 10.1016/j.saa.2014.11.085] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2014] [Revised: 11/08/2014] [Accepted: 11/20/2014] [Indexed: 06/04/2023]
Abstract
Cu(II) complexes [Cu(mqt)(B)H2O]ClO4(1-3) of 2-thiol 4-methylquinoline and phenanthroline bases (B), viz 1,10-phenanthroline (phen in 1), Dipyrido[3,2-d:2',3'-f]quinoxaline (dpq in 2) and Dipyrido[3,2-a:2',3'-c]phenazine (dppz in 3) have been prepared and characterized by elemental analysis, IR, UV-Vis, magnetic moment values, EPR spectra and conductivity measurements. The spectral data reveal that all the complexes exhibit square-pyramidal geometry. The DNA-binding behaviors of the three complexes were investigated by absorption spectra, viscosity measurements and thermal denaturation studies. The DNA binding constants for complexes (1), (2) and (3) were determined to 2.2×10(3), 1.3×10(4) and 8.6×10(4)M(-1) respectively. The experimental results suggest that these complexes interact with DNA through groove-binding mode. The photo induced cleavage studies shows that the complexes possess photonuclease property against pUC19 DNA under UV-Visible irradiation via a mechanistic pathway involving formation of singlet oxygen as the reactive species. Antimicrobial photodynamic therapy was studied using photodynamic antimicrobial chemotherapy (PACT) assay against Escherichiacoli and all complexes exhibited significant reduction in bacterial growth on photoirradiation.
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Affiliation(s)
- C N Sudhamani
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
| | - H S Bhojya Naik
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India.
| | - K R Sangeetha Gowda
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
| | - M Giridhar
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
| | - D Girija
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
| | - P N Prashanth Kumar
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
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Sharath N, Naik HSB, Kumar BV. Synthesis, DNA binding, and photonuclease activity of new tetraaza macrocyclic constrained isoxazole rings as subunit in metal complexes. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2014; 31:813-29. [PMID: 23145951 DOI: 10.1080/15257770.2012.732249] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
The DNA-binding and photonuclease activity of newly synthesized tetra-azamacrocyclic ligand L (C(32)H(32)N(8)O(4)) and its complexes of type [MLCl(2)] and [ML]Cl(2) (where M = Co(II), Fe(II) and Cu(II); L = N,N'-[3-(4-{5-[(2-amino-ethylamino)-methyl]-isoxazol-3yl}-phenyl)-isoxazol-5-yl methyl-ethane-1,2-diamine] are specified. An octahedral geometry has been proposed for Fe(II) and Co(II) complexes, while the Cu(II) complex has a square planar environment. The absorption spectral results indicate that the complexes bind with the base pairs of DNA, with an intrinsic binding constant K(b) of Fe(II), Co(II), and Cu(II) complexes found to be 3.2 × 10(4) M(-1), 5.3 × 10(4) M(-1), and 4.2 × 10(4) M(-1), respectively, in 5 mM Tris-HCl/50 mM NaCl buffer at pH 7.2. The large enhancement in the relative viscosity of DNA on binding to the complexes supports the proposed DNA binding modes. The viscosity and thermal denaturation studies sustain the effective intercalation with DNA. The DNA photocleavage studies demonstrated that compounds exhibit significant photonuclease activity by a concentration dependent on singlet oxygen mediated mechanism.
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Affiliation(s)
- N Sharath
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta, India
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Vinay Kumar B, Bhojya Naik HS, Girija D, Sharath N, Pradeepa SM, Joy Hoskeri H, Prabhakara MC. Synthesis, DNA-binding, DNA-photonuclease profiling and antimicrobial activity of novel tetra-aza macrocyclic Ni(II), Co(II) and Cu(II) complexes constrained by thiadiazole. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 94:192-199. [PMID: 22525032 DOI: 10.1016/j.saa.2012.03.071] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2012] [Revised: 03/17/2012] [Accepted: 03/22/2012] [Indexed: 05/31/2023]
Abstract
A new tetra-aza macrocyclic ligand, L (C(24)H(16)N(12)O(2)S(4)) and its complexes of type, [MLCl(2)] and [CuL]Cl(2) (where M=Ni(II), Co(II); L=N,N'-(benzene-1,3-diyldi-1,3,4-thiadiazole-5,2-diyl)bis{2-[(5-benzene-1,3-diyl-1,3,4-thiadiazol-2-yl)amino]acetamide}) were synthesized and characterized by the spectral and analytical techniques. An octahedral geometry has been proposed for Ni(II) and Co(II) complexes while Cu(II) complex exhibit a square planar geometry. All the synthesized metal complexes were screened for their in vitro antimicrobial activity against selected species of pathogenic bacteria and fungi. The binding property of the complexes with CT-DNA was studied by absorption spectral analysis, followed by viscosity measurement and thermal denaturation studies. The photo induced cleavage studies revealed that the complexes possess photonuclease property against pUC19 DNA under UV-visible irradiation.
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Affiliation(s)
- B Vinay Kumar
- Department of Studies and Research in Industrial Chemistry, School of Chemical Sciences, Kuvempu University, Shankaraghatta 577 451, India
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Kumar BV, Naik HSB, Girija D, Sharath N, Pradeepa SM. Metal Complexes of New Tetraazamacrocyclic Constrained Oxadiazole Ring as Subunits: Synthesis, DNA Binding and Photonuclease Activity. JOURNAL OF MACROMOLECULAR SCIENCE PART A-PURE AND APPLIED CHEMISTRY 2012. [DOI: 10.1080/10601325.2012.642210] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Vinay Kumar B, Naik HSB, Girija D, Sharath N, Sudeep HV, Joy Hoskeri H. Synthesis and Biological Evaluation of New Tetra-aza Macrocyclic Scaffold Constrained Oxadiazole, Thiadiazole and Triazole Rings. Arch Pharm (Weinheim) 2011; 345:240-9. [DOI: 10.1002/ardp.201100181] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2011] [Revised: 09/10/2011] [Accepted: 09/20/2011] [Indexed: 11/11/2022]
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1,2,3-Triazole Fused Quinoline-Peptidomimetics: Studies on Synthesis, DNA Binding and Photonuclease Activity. Int J Pept Res Ther 2009. [DOI: 10.1007/s10989-009-9188-x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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