1
|
Fan H, Li S, Zeng L, He P, Xu S, Bai T, Huang Y, Guo Z, Zheng SJ. Biological Control of Fusarium oxysporum f. sp. cubense Tropical Race 4 Using Natively Isolated Bacillus spp. YN0904 and YN1419. J Fungi (Basel) 2021; 7:jof7100795. [PMID: 34682217 PMCID: PMC8537417 DOI: 10.3390/jof7100795] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Revised: 09/12/2021] [Accepted: 09/14/2021] [Indexed: 11/23/2022] Open
Abstract
Fusarium wilt of banana (FWB) is the main threatening factor for banana production worldwide. To explore bacterial biocontrol resources for FWB, the antagonistic effective strains were isolated from banana-producing areas in Yunnan Province, China. Two isolates (YN0904 and YN1419) displaying strong antagonism against Tropical Race 4 (TR4) were identified from a total of 813 strains of endophytic bacteria. TR4 inhibition rates of YN0904 and YN1419 were 79.6% and 81.3%, respectively. By looking at morphological, molecular, physiological and biochemical characteristics, YN0904 was identified as Bacillus amyloliquefaciens, while YN1419 was identified as B. subtillis. The control effects of YN0904 and YN1419 on TR4 in greenhouse experiments were 82.6% and 85.6%, respectively. Furthermore, YN0904 obviously promoted the growth of banana plantlets. In addition, biocontrol marker genes related to the biosynthesis of antibiotics synthesized and auxin key synthetase genes could be detected in YN0904. Surprisingly, the marker gene sboA could be exclusively detected in YN1419, while other marker genes were all absent. Molecular characterization results could provide a theoretical basis for expounding the biocontrol mechanisms of these two strains. We concluded that natively antagonistic strains derived from local banana plantations could provide new biological control resources for FWB.
Collapse
Affiliation(s)
- Huacai Fan
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Shu Li
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Li Zeng
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
- Correspondence: (L.Z.); (S.-J.Z.)
| | - Ping He
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Shengtao Xu
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Tingting Bai
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Yuling Huang
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Zhixiang Guo
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
| | - Si-Jun Zheng
- Yunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resources Institute, Yunnan Academy of Agricultural Sciences, 2238 Beijing Road, Kunming 650205, China; (H.F.); (S.L.); (P.H.); (S.X.); (T.B.); (Y.H.); (Z.G.)
- Bioversity International, 2238 Beijing Road, Kunming 650205, China
- Correspondence: (L.Z.); (S.-J.Z.)
| |
Collapse
|
2
|
Hashimoto K, Kubota N, Marushima T, Ohno M, Nakai S, Motoshige H, Nishijima W. A quantitative analysis method to determine the amount of cellulose fibre in waste sludge. ENVIRONMENTAL TECHNOLOGY 2021; 42:1225-1235. [PMID: 31475875 DOI: 10.1080/09593330.2019.1662097] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Accepted: 08/24/2019] [Indexed: 06/10/2023]
Abstract
A novel quantitative analysis method for cellulose fibre was developed to understand its behaviour in biological wastewater treatment and waste sludge processes. The method developed in this study was designed using Pseudomonas aeruginosa to remove it by dissolving all the organic components except cellulose from the sludge due to needing the solubilisation of bacteria occupied almost of sludge matrix and quantifying the amount of remaining cellulose. The results of this study indicated that a combined treatment process that employed 2,000 U/L protease, 2 M hydrogen peroxide, and 2 mM potassium hydroxide after pre-treatment for floc dispersion with an ultrasonic treatment at 26 W for 1 min resulted in a solubilisation of 96% of P. aeruginosa without losing the cellulose fibre. When it was applied to the cellulose fibre added in the sludge from a municipal wastewater treatment facility, 99.5% of the cellulose fibre was recovered by using the high-speed centrifuge.
Collapse
Affiliation(s)
- Kurumi Hashimoto
- Environmental Research and Management Center, Hiroshima University, Hiroshima, Japan
| | - Narumi Kubota
- Graduate School of Engineering, Hiroshima University, Hiroshima, Japan
| | - Toru Marushima
- Graduate School of Engineering, Hiroshima University, Hiroshima, Japan
| | - Masaki Ohno
- Environmental Research and Management Center, Hiroshima University, Hiroshima, Japan
| | - Satoshi Nakai
- Graduate School of Engineering, Hiroshima University, Hiroshima, Japan
| | | | - Wataru Nishijima
- Environmental Research and Management Center, Hiroshima University, Hiroshima, Japan
| |
Collapse
|
3
|
Nogina T, Fomina M, Dumanskaya T, Zelena L, Khomenko L, Mikhalovsky S, Podgorskyi V, Gadd GM. A new Rhodococcus aetherivorans strain isolated from lubricant-contaminated soil as a prospective phenol-biodegrading agent. Appl Microbiol Biotechnol 2020; 104:3611-3625. [PMID: 32043191 PMCID: PMC7089913 DOI: 10.1007/s00253-020-10385-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 01/03/2020] [Accepted: 01/16/2020] [Indexed: 11/29/2022]
Abstract
Microbe-based decontamination of phenol-polluted environments has significant advantages over physical and chemical approaches by being relatively cheaper and ensuring complete phenol degradation. There is a need to search for commercially prospective bacterial strains that are resistant to phenol and other co-pollutants, e.g. oil hydrocarbons, in contaminated environments, and able to carry out efficient phenol biodegradation at a variable range of concentrations. This research characterizes the phenol-biodegrading ability of a new actinobacteria strain isolated from a lubricant-contaminated soil environment. Phenotypic and phylogenetic analyses showed that the novel strain UCM Ac-603 belonged to the species Rhodococcus aetherivorans, and phenol degrading ability was quantitatively characterized for the first time. R. aetherivorans UCM Ac-603 tolerated and assimilated phenol (100% of supplied concentration) and various hydrocarbons (56.2–94.4%) as sole carbon sources. Additional nutrient supplementation was not required for degradation and this organism could grow at a phenol concentration of 500 mg L−1 without inhibition. Complete phenol assimilation occurred after 4 days at an initial concentration of 1750 mg L−1 for freely-suspended cells and at 2000 mg L−1 for vermiculite-immobilized cells: 99.9% assimilation of phenol was possible from a total concentration of 3000 mg L−1 supplied at daily fractional phenol additions of 750 mg L−1 over 4 days. In terms of phenol degradation rates, R. aetherivorans UCM Ac-602 showed efficient phenol degradation over a wide range of initial concentrations with the rates (e.g. 35.7 mg L−1 h−1 at 500 mg L−1 phenol, and 18.2 mg L−1 h−1 at 1750 mg L−1 phenol) significantly exceeding (1.2–5 times) reported data for almost all other phenol-assimilating bacteria. Such efficient phenol degradation ability compared to currently known strains and other beneficial characteristics of R. aetherivorans UCM Ac-602 suggest it is a promising candidate for bioremediation of phenol-contaminated environments.
Collapse
Affiliation(s)
- Taisiya Nogina
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Marina Fomina
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Tatiana Dumanskaya
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Liubov Zelena
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Lyudmila Khomenko
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Sergey Mikhalovsky
- ANAMAD Ltd, Sussex Innovation Centre, Science Park Square, Falmer, Brighton, BN1 9SB, UK.,Chuiko Institute of Surface Chemistry, 17, General Naumov Street, Kyiv, 03164, Ukraine
| | - Valentin Podgorskyi
- Zabolotny Institute of Microbiology and Virology of National Academy of Sciences of Ukraine, Zabolotny str., 154, Kyiv, 03143, Ukraine
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK. .,State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, Beijing, 102249, China.
| |
Collapse
|
4
|
Sorption of phenol from synthetic aqueous solution by activated saw dust: Optimizing parameters with response surface methodology. Biochem Biophys Rep 2017; 12:46-53. [PMID: 28955791 PMCID: PMC5613239 DOI: 10.1016/j.bbrep.2017.08.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2016] [Revised: 07/11/2017] [Accepted: 08/16/2017] [Indexed: 11/25/2022] Open
Abstract
Organic pollutants have an adverse effect on the neighboring environment. Industrial activates are the major sources of different organic pollutants. These primary pollutants react with surrounding and forms secondary pollutant, which persists for a long time. The present investigation has been carried out on the surface of activated sawdust for phenol eliminations. The process parameters initial concentration, contact time, adsorbent dose and pH were optimized by the response surface methodology (RSM). The numerical optimization of sawdust (SD), initial concentration 10 mg/l, contact time 1.5 h, adsorbent dose 4 g and pH 2, the optimum response result was 78.3% adsorption. Analysis of variance (ANOVA) was used to judge the adequacy of the central composite design and quadratic model found to be suitable. The coefficient of determination values was found to be maximum Adj R2 0.7223, and Pre R2 0.5739 and significant regression at 95% confidence level values. Adsorption of phenol contains water and wastewater. Chemical toxicity of phenol affects the air, water, and soil. Operating parameters optimization with response surface methodology (RSM). Saw dust as bio-adsorbent material. Physicochemical characteristics of activated sawdust.
Collapse
|
5
|
The influence of different modes of bioreactor operation on the efficiency of phenol degradation by Rhodococcus UKMP-5M. RENDICONTI LINCEI-SCIENZE FISICHE E NATURALI 2016. [DOI: 10.1007/s12210-016-0567-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
6
|
Draft Genome Sequence of a Pseudomonas aeruginosa Strain Able To Decompose
N
,
N
-Dimethyl Formamide. GENOME ANNOUNCEMENTS 2016; 4:4/1/e01609-15. [PMID: 26847883 PMCID: PMC4742680 DOI: 10.1128/genomea.01609-15] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Pseudomonas aeruginosa is a Gram-negative bacterium, which uses a variety of organic chemicals as carbon sources. Here, we report the genome sequence of the Cu1510 isolate from wastewater containing a high concentration of N,N-dimethyl formamide.
Collapse
|