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Calabon MS, Hyde KD, Jones EBG, Luo ZL, Dong W, Hurdeal VG, Gentekaki E, Rossi W, Leonardi M, Thiyagaraja V, Lestari AS, Shen HW, Bao DF, Boonyuen N, Zeng M. Freshwater fungal numbers. FUNGAL DIVERS 2022. [DOI: 10.1007/s13225-022-00503-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Luo ZL, Hyde KD, Liu JK(J, Maharachchikumbura SSN, Jeewon R, Bao DF, Bhat DJ, Lin CG, Li WL, Yang J, Liu NG, Lu YZ, Jayawardena RS, Li JF, Su HY. Freshwater Sordariomycetes. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00438-1] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Abstract
Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi mainly characterized by perithecial ascomata and inoperculate unitunicate asci. Freshwater Sordariomycetes play an important role in ecosystems and some of them have the potential to produce bioactive compounds. This study documents and reviews the freshwater Sordariomycetes, which is one of the largest and important groups of fungi in aquatic habitats. Based on evidence from DNA sequence data and morphology, we introduce a new order Distoseptisporales, two new families, viz. Ceratosphaeriaceae and Triadelphiaceae, three new genera, viz. Aquafiliformis, Dematiosporium and Neospadicoides, 47 new species, viz. Acrodictys fluminicola, Aquafiliformis lignicola, Aquapteridospora fusiformis, Arthrinium aquaticum, Ascosacculus fusiformis, Atractospora aquatica, Barbatosphaeria lignicola, Ceratosphaeria aquatica, C. lignicola, Chaetosphaeria aquatica, Ch. catenulata, Ch. guttulata, Ch. submersa, Codinaea yunnanensis, Conioscypha aquatica, C. submersa, Cordana aquatica, C. lignicola, Cosmospora aquatica, Cylindrotrichum submersum, Dematiosporium aquaticum, Dictyochaeta cangshanensis, D. ellipsoidea, D. lignicola, D. submersa, Distoseptispora appendiculata, D. lignicola, D. neorostrata, D. obclavata, Hypoxylon lignicola, Lepteutypa aquatica, Myrmecridium aquaticum, Neospadicoides aquatica, N. lignicola, N. yunnanensis, Ophioceras submersum, Peroneutypa lignicola, Phaeoisaria filiformis, Pseudostanjehughesia lignicola, Rhodoveronaea aquatica, Seiridium aquaticum, Sporidesmiella aquatica, Sporidesmium lageniforme, S. lignicola, Tainosphaeria lunata, T. obclavata, Wongia aquatica, two new combinations, viz. Acrodictys aquatica, Cylindrotrichum aquaticum, and 9 new records, viz. Chaetomium globosum, Chaetosphaeria cubensis, Ch. myriocarpa, Cordana abramovii, Co. terrestris, Cuspidatispora xiphiago, Sporidesmiella hyalosperma, Stachybotrys chartarum,S. chlorohalonata. A comprehensive classification of the freshwater Sordariomycetes is presented based on updated literature. Phylogenetic inferences based on DNA sequence analyses of a combined LSU, SSU, RPB2 and TEF1α dataset comprising species of freshwater Sordariomycetes are provided. Detailed information including their habitats distribution, diversity, holotype, specimens collected and classification are provided.
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Jones EBG, Pang KL, Abdel-Wahab MA, Scholz B, Hyde KD, Boekhout T, Ebel R, Rateb ME, Henderson L, Sakayaroj J, Suetrong S, Dayarathne MC, Kumar V, Raghukumar S, Sridhar KR, Bahkali AHA, Gleason FH, Norphanphoun C. An online resource for marine fungi. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00426-5] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Senanayake I, Crous P, Groenewald J, Maharachchikumbura S, Jeewon R, Phillips A, Bhat J, Perera R, Li Q, Li W, Tangthirasunun N, Norphanphoun C, Karunarathna S, Camporesi E, Manawasighe I, Al-Sadi A, Hyde K. Families of Diaporthales based on morphological and phylogenetic evidence. Stud Mycol 2017; 86:217-296. [PMID: 28947840 PMCID: PMC5603113 DOI: 10.1016/j.simyco.2017.07.003] [Citation(s) in RCA: 94] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Diaporthales is an important ascomycetous order comprising phytopathogenic, saprobic, and endophytic fungi, but interfamilial taxonomic relationships are still ambiguous. Despite its cosmopolitan distribution and high diversity with distinctive morphologies, this order has received relativelyiaceae, Macrohilaceae, Melanconidaceae, Pseudoplagiostomaceae, Schizoparmaceae, Stilbosporaceae and Sydowiellaceae. Taxonomic uncertainties among genera are also clarified and recurrent discrepancies in the taxonomic position of families within the Diaporthales are discussed. An updated outline and key to families and genera of the order is presented.
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Key Words
- & K.D. Hyde
- Apiosporopsidaceae Senan. Maharachch. & K.D. Hyde
- Apoharknessiaceae Senan. Maharachch. & K.D. Hyde
- Asterosporiaceae Senan. Maharachch. & K.D. Hyde
- Auratiopycnidiellaceae Senan. Maharachch. & K.D. Hyde
- Camporesi
- Camporesi & K.D. Hyde
- Chiangraiomyces Senan. & K.D. Hyde
- Chiangraiomyces bauhiniae Senan. & K.D. Hyde
- Coniella pseudokoreana Senan., Tangthir. & K.D. Hyde
- Coryneum arausiaca (Fabre) Senan., Maharachch. & K.D. Hyde
- Cytospora centrivillosa Senan., Camporesi & K.D. Hyde
- Cytospora fraxinigena Senan., Camporesi & K.D. Hyde
- Cytospora junipericola Senan., Camporesi & K.D. Hyde
- Cytospora quercicola Senan., Camporesi & K.D. Hyde
- Cytospora rosae Senan., Camporesi & K.D. Hyde
- Diaporthe litoricola Senan., E.B.G. Jones & K.D. Hyde
- Ditopella biseptata R.H. Perera, Senan., Camporesi & K.D. Hyde
- Erythrogloeaceae Senan. Maharachch. & K.D. Hyde
- Gnomoniopsis agrimoniae Senan., Camporesi & K.D. Hyde
- Hyaliappendispora Senan.
- Hyaliappendispora galii Senan., Camporesi & K.D. Hyde
- Marsupiomyces Senan. & K.D. Hyde
- Marsupiomyces epidermoidea R.H. Perera, Senan., Bulgakov & K.D. Hyde
- Marsupiomyces quercina Senan., Camporesi & K.D. Hyde
- Melanconiellaceae Senan. Maharachch. & K.D. Hyde
- Melanconis italica Senan., Camporesi & K.D. Hyde
- Microascospora Senan.
- Microascospora fragariae (F. Stevens & Peterson) Senan., Maharachch. & K.D. Hyde
- Microascospora rubi Senan., Camporesi & K.D. Hyde
- Multi-gene DNA phylogeny
- New taxonomic arrangement
- Paradiaporthe Senan.
- Paradiaporthe artemisiae Senan., Camporesi & K.D. Hyde
- Phaeoappendicospora Senan., Q.R. Li & K.D. Hyde
- Phaeoappendicospora thailandensis Senan., Q.R. Li & K.D. Hyde
- Phytopathogenic fungi
- Plagiostoma jonesii Senan., & K.D. Hyde
- Plagiostoma salicicola Senan., Camporesi & K.D. Hyde
- Prosopidicolaceae Senan. & K.D. Hyde
- Sordariomycetes
- Sydowiella urticicola Senan., Camporesi & K.D. Hyde
- Systematics
- Tubakia thailandensis Senan., Tangthir., K.D. Hyde
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Affiliation(s)
- I.C. Senanayake
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
- East and Central Asia, World Agroforestry Centre, Kunming 650201, Yunnan, China
- Center of Excellence for Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - P.W. Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - J.Z. Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - S.S.N. Maharachchikumbura
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, P.O. Box 34, Al-Khod 123, Oman
| | - R. Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, 80837, Mauritius
| | - A.J.L. Phillips
- Faculty of Sciences, Biosystems and Integrative Sciences Institute (BioISI), University of Lisbon, Campo Grande, 1749-016 Lisbon, Portugal
| | - J.D. Bhat
- Department of Botany, Goa University, Goa 403 206, India
- No. 128/1-J, Azad Housing Society, Curca, P.O. Goa Velha 403108, India
| | - R.H. Perera
- Center of Excellence for Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Q.R. Li
- Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou 550025, China
| | - W.J. Li
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
- East and Central Asia, World Agroforestry Centre, Kunming 650201, Yunnan, China
- Center of Excellence for Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - N. Tangthirasunun
- Univ Paris Diderot, Sorbonne Paris Cité, Institut des Energies de Demain (IED), Paris 75205, France
- Univ Paris Sud, Institut de Génétique et Microbiologie, UMR8621, Orsay 91405, France
| | - C. Norphanphoun
- Center of Excellence for Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - S.C. Karunarathna
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
- East and Central Asia, World Agroforestry Centre, Kunming 650201, Yunnan, China
| | - E. Camporesi
- A.M.B. Gruppo Micologico Forlivese, Antonio Cicognani, Via Roma 18, Forlì, Italy
- A.M.B. Circolo Micologico, Giovanni Carini, 314 Brescia, Italy
- Società per gliStudiNaturalisticidella Romagna, 144 Bagnacavallo, RA, Italy
| | - I.S. Manawasighe
- Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, No. 9 of ShuGuangHuaYuanZhongLu, Haidian District, Beijing 100097, China
| | - A.M. Al-Sadi
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, P.O. Box 34, Al-Khod 123, Oman
| | - K.D. Hyde
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China
- East and Central Asia, World Agroforestry Centre, Kunming 650201, Yunnan, China
- Center of Excellence for Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
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Sakayaroj J, Pang KL, Phongpaichit S, Jones EG. A phylogenetic study of the genusHaligena(Halosphaeriales, Ascomycota). Mycologia 2017. [DOI: 10.1080/15572536.2006.11832772] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Jariya Sakayaroj
- Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand, National Center for Genetic Engineering and Biotechnology, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand
| | - Ka-Lai Pang
- Department of Biology and Chemistry, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon Tong, Hong Kong SAR, School of Biological Sciences, University of Portsmouth, King Henry Building, King Henry I Street, Portsmouth, PO1 2DY, UK
| | - Souwalak Phongpaichit
- Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand
| | - E.B. Gareth Jones
- National Center for Genetic Engineering and Biotechnology, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand
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Raja HA, Shearer CA. Freshwater ascomycetes: new and noteworthy species from aquatic habitats in Florida. Mycologia 2017; 100:467-89. [DOI: 10.3852/07-167r] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Carol A. Shearer
- Department of Plant Biology, University of Illinois, Room 265 Morrill Hall, 505 South Goodwin Avenue, Urbana, Illinois 61801
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Grolig F, Döring M, Galland P. Gravisusception by buoyancy: a mechanism ubiquitous among fungi? PROTOPLASMA 2006; 229:117-23. [PMID: 17180492 DOI: 10.1007/s00709-006-0218-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2005] [Accepted: 11/25/2005] [Indexed: 05/13/2023]
Abstract
Gravitropism is ubiquitous among the fungal taxa; however, the mechanism(s) of gravisusception have overall remained obscure so far. In the vegetative sporangiophore of the zygomycete Phycomyces blakesleeanus some 200 large lipid globules form a conspicuous spherical complex which is positioned in a dense mesh of filamentous actin about 100 microm below the growing tip of the apex. Experimental suppression of that complex by transient growth at low temperature greatly diminishes the gravitropic response of the sporangiophore. With respect to size and abundance of the globules, the complex of lipid globules meets basic physical criteria for a possible function of gravisusception. Accumulations of similar lipid globules of critical size are documented in the apex of gravitropically growing hyphae of the endomycorrhizal fungus Gigaspora margarita (Glomeromycota) and have been described in the hyphal apices of members of various fungal phyla. We suppose that--in contrast to plants which use starch as a carbon storage and amyloplasts as statoliths--the fungi utilise the buoyancy of carbon-storing oil droplets for gravisusception.
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Affiliation(s)
- F Grolig
- Pflanzenphysiologie und Photobiologie, Fachbereich Biologie, Philipps-Universität, Marburg, Federal Republic of Germany.
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