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Anwar A, Akhtar J, Aleem S, Aleem M, Razzaq MK, Alamri S, Raza Q, Sharif I, Iftikhar A, Naseer S, Ahmed Z, Rana IA, Arshad W, Khan MI, Bhat JA, Aleem M, Gaafar ARZ, Hodhod MS. Genome-wide identification of MGT gene family in soybean (Glycine max) and their expression analyses under magnesium stress conditions. BMC PLANT BIOLOGY 2025; 25:83. [PMID: 39838318 PMCID: PMC11752955 DOI: 10.1186/s12870-024-05985-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Accepted: 12/17/2024] [Indexed: 01/23/2025]
Abstract
BACKGROUND Magnesium (Mg) is essential for plant growth and development and plays critical roles in physiological and biochemical processes. Mg deficiency adversely affects growth of plants by limiting shoot and root development, disturbing the structure and membranes of the grana, reducing photosynthesis efficiency, and lowering net CO2 assimilation. The MGT (Magnesium transporter) family is responsible for the absorption and transportation of magnesium in plants. Although the MGT family has been identified in different plant species, research regarding the soybean MGT genes is limited. RESULTS In the current study, a total of 39 MGT genes distributed on 17 different chromosomes were identified in soybean. Phylogenetic analysis classified GmMGTs into three subgroups, NIPA, MRS2/MGT, and CorA, which showed little homology with MGTs of Arabidopsis thaliana and Oryza sativa members and clustered tightly with GmMGTs. Gene structure and conserved motif analysis also confirmed similar grouping in GmMGTs. The expansion of the GmMGT members in NIPA and MRS2/MGT was predicted, while CorA was identified as the most conserved group in G. max. Segmental duplication under purifying selection pressure was identified as the major driving force in the expansion of MGTs in soybean. GmMGTs showed diverse tissue-specific and stress-response expression patterns due to the presence of stress-related cis-regulatory elements in their promoter regions. Under Mg-deficiency and surplus stress conditions, a decrease in root length, shoot length, and root and shoot fresh as well dry weight in susceptible genotypes showed the variegated expression of MGTs in soybean genotypes. Furthermore, the upregulation of GmMGT2 and GmMGT29 in tolerant genotypes in response to Mg-deficiency as well as surplus stress conditions in leaves suggested the essential role of GmMGT genes in the absorption and transportation of Mg in soybean leaves. CONCLUSION This study presents a comprehensive analysis of the MGT gene family in soybean, providing insights into their evolutionary relationships, gene classification, protein structures, and expression patterns under both Mg deficiency and Mg surplus conditions.
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Affiliation(s)
- Ammar Anwar
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Junaid Akhtar
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Saba Aleem
- Barani Agricultural Research Station, FatehjangAyub Agricultural Research Institute, Faisalabad, Pakistan
| | - Maida Aleem
- Department of Botany, University of Agriculture, Faisalabad, Pakistan
| | | | - Saud Alamri
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia
| | - Qasim Raza
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Iram Sharif
- Cotton Research Station, Faisalabad, Ayub Agricultural Research Institute, Faisalabad, Pakistan
| | - Arooj Iftikhar
- Department of Environmental Sciences, University of Veterinary and Animal Sciences, Lahore, Pakistan
| | - Shehreen Naseer
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Zaheer Ahmed
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Iqrar Ahmed Rana
- Centre of Agricultural Biochemistry and Biotechnology (CABB), University of University of Agriculture, Faisalabad, Pakistan
| | - Waheed Arshad
- Barani Agricultural Research Station, FatehjangAyub Agricultural Research Institute, Faisalabad, Pakistan
| | - Muhammad Imran Khan
- Barani Agricultural Research Station, FatehjangAyub Agricultural Research Institute, Faisalabad, Pakistan
| | | | - Muqadas Aleem
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan.
- The Center for Advanced Studies in Agriculture and Food Security, University of Agriculture, Faisalabad, Pakistan.
| | - Abdel-Rhman Z Gaafar
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia
| | - Mohamed S Hodhod
- Faculty of Biotechnology, October University for Modern Sciences & Arts, 6th October City, Egypt
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Lopez LE, Ibeas MA, Diaz Dominguez G, Estevez JM. Exploring the puzzle of reactive oxygen species acting on root hair cells. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:4589-4598. [PMID: 38833316 DOI: 10.1093/jxb/erae260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 06/03/2024] [Indexed: 06/06/2024]
Abstract
Reactive oxygen species (ROS) are essential signaling molecules that enable cells to respond rapidly to a range of stimuli. The ability of plants to recognize various stressors, incorporate a variety of environmental inputs, and initiate stress-response networks depends on ROS. Plants develop resilience and defensive systems as a result of these processes. Root hairs are central components of root biology since they increase the surface area of the root, anchor it in the soil, increase its ability to absorb water and nutrients, and foster interactions between microorganisms. In this review, we specifically focused on root hair cells and we highlighted the identification of ROS receptors, important new regulatory hubs that connect ROS production, transport, and signaling in the context of two hormonal pathways (auxin and ethylene) and under low temperature environmental input related to nutrients. As ROS play a crucial role in regulating cell elongation rates, root hairs are rapidly gaining traction as a very valuable single plant cell model for investigating ROS homeostasis and signaling. These promising findings might soon facilitate the development of plants and roots that are more resilient to environmental stressors.
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Affiliation(s)
- Leonel E Lopez
- Fundación Instituto Leloir and IIBBA-CONICET, Av. Patricias Argentinas 435, Buenos Aires CP C1405BWE, Argentina
| | - Miguel A Ibeas
- Centro de Biotecnología Vegetal (CBV), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
| | - Gabriela Diaz Dominguez
- Fundación Instituto Leloir and IIBBA-CONICET, Av. Patricias Argentinas 435, Buenos Aires CP C1405BWE, Argentina
| | - Jose M Estevez
- Fundación Instituto Leloir and IIBBA-CONICET, Av. Patricias Argentinas 435, Buenos Aires CP C1405BWE, Argentina
- Centro de Biotecnología Vegetal (CBV), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
- ANID-Millennium Science Initiative Program-Millennium Nucleus for the Development of Super Adaptable Plants (MN-SAP), Santiago, Chile
- ANID-Millennium Science Initiative Program-Millennium Institute for Integrative Biology (iBio), Santiago, Chile
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Pacheco JM, Gabarain VB, Lopez LE, Lehuedé TU, Ocaranza D, Estevez JM. Understanding signaling pathways governing the polar development of root hairs in low-temperature, nutrient-deficient environments. CURRENT OPINION IN PLANT BIOLOGY 2023; 75:102386. [PMID: 37352652 DOI: 10.1016/j.pbi.2023.102386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 05/04/2023] [Accepted: 05/07/2023] [Indexed: 06/25/2023]
Abstract
Plants exposed to freezing and above-freezing low temperatures must employ a variety of strategies to minimize fitness loss. There is a considerable knowledge gap regarding how mild low temperatures (around 10 °C) affect plant growth and developmental processes, even though the majority of the molecular mechanisms that plants use to adapt to extremely low temperatures are well understood. Root hairs (RH) have become a useful model system for studying how plants regulate their growth in response to both cell-intrinsic cues and environmental inputs. Here, we'll focus on recent advances in the molecular mechanisms underpinning Arabidopsis thaliana RH growth at mild low temperatures and how these discoveries may influence our understanding of nutrient sensing mechanisms by the roots. This highlights how intricately linked mechanisms are necessary for plant development to take place under specific circumstances and to produce a coherent response, even at the level of a single RH cell.
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Affiliation(s)
- Javier Martínez Pacheco
- Fundación Instituto Leloir and IIBBA-CONICET. Av. Patricias Argentinas 435, Buenos Aires C1405BWE, Argentina; ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile
| | - Victoria Berdion Gabarain
- Fundación Instituto Leloir and IIBBA-CONICET. Av. Patricias Argentinas 435, Buenos Aires C1405BWE, Argentina; ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile
| | - Leonel E Lopez
- Fundación Instituto Leloir and IIBBA-CONICET. Av. Patricias Argentinas 435, Buenos Aires C1405BWE, Argentina; ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile
| | - Tomás Urzúa Lehuedé
- ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile; ANID - Millennium Science Initiative Program - Millennium Institute for Integrative Biology (iBio), Santiago 8331150, Chile; Centro de Biotecnología Vegetal (CBV), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370146, Chile
| | - Darío Ocaranza
- ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile; Centro de Biotecnología Vegetal (CBV), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370146, Chile
| | - José M Estevez
- Fundación Instituto Leloir and IIBBA-CONICET. Av. Patricias Argentinas 435, Buenos Aires C1405BWE, Argentina; ANID - Millennium Science Initiative Program - Millennium Nucleus for the DeveIopment of Super Adaptable Plants (MN-SAP), Santiago 8370146, Chile; ANID - Millennium Science Initiative Program - Millennium Institute for Integrative Biology (iBio), Santiago 8331150, Chile; Centro de Biotecnología Vegetal (CBV), Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370146, Chile.
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Liu M, Bi J, Liu X, Kang J, Korpelainen H, Niinemets Ü, Li C. Microstructural and physiological responses to cadmium stress under different nitrogen levels in Populus cathayana females and males. TREE PHYSIOLOGY 2020; 40:30-45. [PMID: 31748807 DOI: 10.1093/treephys/tpz115] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Revised: 09/08/2019] [Accepted: 10/24/2019] [Indexed: 06/10/2023]
Abstract
Although increasing attention has been paid to the relationships between heavy metal and nitrogen (N) availability, the mechanism underlying adaptation to cadmium (Cd) stress in dioecious plants has been largely overlooked. This study examined Cd accumulation, translocation and allocation among tissues and cellular compartments in Populus cathayana Rehder females and males. Both leaf Cd accumulation and root-to-shoot Cd translocation were significantly greater in females than in males under a normal N supply, but they were reduced in females and enhanced in males under N deficiency. The genes related to Cd uptake and translocation, HMA2, YSL2 and ZIP2, were strongly induced by Cd stress in female roots and in males under a normal N supply. Cadmium largely accumulated in the leaf blades of females and in the leaf veins of males under a normal N supply, while the contrary was true under N deficiency. Furthermore, Cd was mainly distributed in the leaf epidermis and spongy tissues of males, and in the leaf palisade tissues of females. Nitrogen deficiency increased Cd allocation to the spongy tissues of female leaves and to the palisade tissues of males. In roots, Cd was preferentially distributed to the epidermis and cortices in both sexes, and also to the vascular tissues of females under a normal N supply but not under N deficiency. These results suggested that males possess better Cd tolerance compared with females, even under N deficiency, which is associated with their reduced root-to-shoot Cd translocation, specific Cd distribution in organic and/or cellular compartments, and enhanced antioxidation and ion homeostasis. Our study also provides new insights into engineering woody plants for phytoremediation.
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Affiliation(s)
- Miao Liu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou 310036, China
| | - Jingwen Bi
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou 310036, China
| | - Xiucheng Liu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou 310036, China
| | - Jieyu Kang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou 310036, China
| | - Helena Korpelainen
- Department of Agricultural Sciences, Viikki Plant Science Centre, University of Helsinki, Helsinki, PO Box 27, FI-00014, Finland
| | - Ülo Niinemets
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 1, 51006 Tartu, Estonia
- Estonian Academy of Sciences, Kohtu 6, 10130 Tallinn, Estonia
- School of Forestry and Bio-Technology, Zhejiang Agriculture & Forestry University, Hangzhou 311300, China
| | - Chunyang Li
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou 310036, China
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