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Piva E, Nicorelli E, Pacchini S, Schumann S, Drago L, Vanzan G, Tolomeo AM, Irato P, Bakiu R, Gerdol M, Santovito G. Unravelling stress granules in the deep cold: Characterisation of TIA-1 gene sequence in Antarctic fish species. FISH & SHELLFISH IMMUNOLOGY 2024; 154:109903. [PMID: 39299404 DOI: 10.1016/j.fsi.2024.109903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 09/11/2024] [Accepted: 09/11/2024] [Indexed: 09/22/2024]
Abstract
Stress granules (SGs) are cytoplasmic foci lacking membranes, comprising non-translating messenger ribonucleoproteins, translational initiation factors, and additional proteins. Their formation is crucial for rapidly modulating gene expression in response to adverse environmental conditions, such as pollution and infections. Limited research has focused on investigating the molecular components of SGs in fish, with minimal exploration in Antarctic fish. This study characterises for the first time the transcript sequences of one key protein component of SGs, TIA-1 (T-cell intracellular antigen 1), in two Antarctic endemic fish species, i.e. Trematomus bernacchii and Chionodraco hamatus. The mRNA-binding protein TIA-1 acts as a post-transcriptional regulator of gene expression and its aggregation leads to the formation of SGs in response to cellular damage. The in vitro and bioinformatic analyses of the TIA-1 gene sequences of these two species highlighted interesting peculiarities, which include the transcription of alternatively spliced isoforms unique to the notothenioid lineage, potentially unlocking further insights into their unique adaptations to extreme environmental conditions. This is the first study to analyze tia-1 expression levels in different tissues of Antarctic fish species. Our key findings indicate that the TIA-1 gene is expressed at particularly high levels in the liver and spleen of C. hamatus, as well as in the heart and skeletal muscle of T. bernacchii. This suggests that those tissues play a significant role in the stress response mechanisms of the studied species. This study provides novel insights into the molecular adaptations of Antarctic fish, highlighting the potential importance of TIA-1 in their response to environmental stressors. The unique features of TIA-1 identified in these species may offer broader implications for understanding how Antarctic fish regulate gene transcriptions in their extreme environments.
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Affiliation(s)
- E Piva
- Department of Biology, University of Padova, Italy
| | - E Nicorelli
- Department of Biology, University of Padova, Italy
| | - S Pacchini
- Department of Biology, University of Padova, Italy
| | - S Schumann
- Department of Biology, University of Padova, Italy
| | - L Drago
- Department of Biology, University of Padova, Italy
| | - G Vanzan
- Department of Biology, University of Padova, Italy
| | - A M Tolomeo
- Department of Cardiac, Thoracic and Vascular Science and Public Health, University of Padova, Italy
| | - P Irato
- Department of Biology, University of Padova, Italy
| | - R Bakiu
- Department of Aquaculture and Fisheries, Agricultural University of Tirana, Albania
| | - M Gerdol
- Department of Life Sciences, University of Trieste, Italy
| | - G Santovito
- Department of Biology, University of Padova, Italy.
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Nędzarek A, Stepanowska K. The excretion of nitrogen and phosphorus and changes in nitrogen content in the Antarctic amphipod Waldeckia obesa and isopod Glyptonotus antarcticus during long-term starvation. THE EUROPEAN ZOOLOGICAL JOURNAL 2022. [DOI: 10.1080/24750263.2022.2107721] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022] Open
Affiliation(s)
- A. Nędzarek
- Department of Aquatic Bioengineering and Aquaculture, Faculty of Food Sciences and Fisheries, West Pomeranian University of Technology Szczecin, Poland
| | - K. Stepanowska
- Department of Aquatic Bioengineering and Aquaculture, Faculty of Food Sciences and Fisheries, West Pomeranian University of Technology Szczecin, Poland
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Lee S, Koo MH, Han DW, Kim IC, Lee JH, Kim JH, Sultana R, Kim SY, Youn UJ, Kim JH. Comparison of Fatty Acid Contents and MMP-1 Inhibitory Effects of the Two Antarctic Fish, Notothenia rossii and Champsocephalus gunnari. Molecules 2022; 27:molecules27144554. [PMID: 35889426 PMCID: PMC9317339 DOI: 10.3390/molecules27144554] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 07/15/2022] [Accepted: 07/15/2022] [Indexed: 12/04/2022] Open
Abstract
Total fatty-acid (FA) contents of different organs (stomach, liver, brain, and skin) of two Antarctic fish, marbled rockcod (Notothenia rossii) and mackerel icefish (Champsocephalus gunnari), were examined using gas chromatography–mass spectrometry (GC–MS). N. rossii possessed higher contents of total omega-3, where eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA), the most represented omega-3 FAs, were distributed throughout all parts of the fish. The highest level of EPA was observed in the skin and that of DHA was observed in the brain of N. rossii. C. gunnari showed organ peculiarity in that most of the omega-3 FAs were found in stomach and skin. Specifically, the highest levels of EPA and DHA were both observed in the stomach. Although N. rossii and C. gunnari both inhabit the Antarctic Southern Oceans, their characteristics in terms of the composition of fatty acids were shown to vary. The extracts were also evaluated for matrix metalloproteinase-1 (MMP-1)-inhibitory activities in UVB-induced human dermal fibroblasts, where extracts of the skin and liver of N. rossii showed the most significant inhibition upon MMP-1 production. These findings provide experimental evidence that the extracts of the Antarctic fish could be utilized as bioactive nutrients, particularly in the enhancement of skin health.
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Affiliation(s)
- Seulah Lee
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
- Seoul School of Integrated Sciences & Technologies (aSSIST), Seoul 03767, Korea
| | - Man Hyung Koo
- Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon 21990, Korea; (M.H.K.); (J.H.L.)
| | - Dong-Won Han
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
| | - Il-Chan Kim
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
| | - Jun Hyuck Lee
- Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon 21990, Korea; (M.H.K.); (J.H.L.)
- Polar Science, University of Science & Technology, Incheon 21990, Korea
| | - Jeong-Hoon Kim
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
| | - Razia Sultana
- Department of Pharmacy, Jagannath University, Dhaka 1100, Bangladesh;
| | - Sun Yeou Kim
- College of Pharmacy, Gachon University, 191 Hambakmoero, Yeonsu-gu, Incheon 21936, Korea;
| | - Ui Joung Youn
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
- Polar Science, University of Science & Technology, Incheon 21990, Korea
- Correspondence: (U.J.Y.); (J.-H.K.); Tel.: +82-32-760-5562 (U.J.Y.); +82-32-760-5583 (J.-H.K.)
| | - Jin-Hyoung Kim
- Division of Polar Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea; (S.L.); (D.-W.H.); (I.-C.K.); (J.-H.K.)
- Polar Science, University of Science & Technology, Incheon 21990, Korea
- Correspondence: (U.J.Y.); (J.-H.K.); Tel.: +82-32-760-5562 (U.J.Y.); +82-32-760-5583 (J.-H.K.)
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4
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Xu H, Bi Q, Meng X, Duan M, Wei Y, Liang M. Response of lipid and fatty acid composition of turbot to starvation under different dietary lipid levels in the previous feeding period. Food Res Int 2022; 151:110905. [PMID: 34980369 DOI: 10.1016/j.foodres.2021.110905] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 12/01/2021] [Accepted: 12/13/2021] [Indexed: 11/04/2022]
Abstract
The present study was aimed at investigating the interactive effects of starvation and dietary lipid level in the previous feeding period on lipid-related composition of turbot. Turbot with an average initial body weight of 26 g were firstly fed diets with different lipid levels, namely, 8%, 12%, and 16%, for 9 weeks, and then subjected to starvation for 30 days. Each diet was fed to sextuplicate tanks of 35 fish in the feeding trial. Tissue samples were collected at the end of the feeding trial and at 10, 20, and 30 days after starvation. The results showed that 30-day starvation decreased the lipid content in the liver and the subcutaneous tissue around the fin (STF), but increased the lipid content in the muscle. A synergetic increase of muscle lipid by starvation and dietary lipid level was observed. Starvation mobilized different fatty acids among the three tissues, namely, MUFA (16:1n-7 and 18:1n-9) in the muscle, SFA (14:0 and 16:0), MUFA (16:1n-7, 18:1n-9 and 20:1n-9), and 18C-PUFA (18:2n-6 and 18:3n-3) in the liver, and unexpectedly n-3 PUFA (18:3n-3, EPA, and DHA) in the STF, respectively. The 30-day starvation decreased the muscle hardness and resilience, but affected other texture parameters in a starvation time-dependent manner. Up-regulation of expression of lipolytic genes by starvation occurred later in the STF than in the liver. Interactive effects of starvation and dietary lipid level were observed mainly on tissue fatty acid compositions. Results of this study suggested that combined manipulation of starvation time and dietary lipid level could be used as an effective means of fish quality regulation in terms of lipid/fatty acid-related composition.
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Affiliation(s)
- Houguo Xu
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China
| | - Qingzhu Bi
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China; College of Fisheries and Life Sciences, Shanghai Ocean University, Shanghai 201306, China
| | - Xiaoxue Meng
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China; College of Fisheries and Life Sciences, Shanghai Ocean University, Shanghai 201306, China
| | - Mei Duan
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China
| | - Yuliang Wei
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China
| | - Mengqing Liang
- Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China.
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