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Chen Z, Ono N, Chen W, Tamura T, Altaf-Ul-Amin MD, Kanaya S, Huang M. The feasibility of predicting impending malignant ventricular arrhythmias by using nonlinear features of short heartbeat intervals. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 205:106102. [PMID: 33933712 DOI: 10.1016/j.cmpb.2021.106102] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Accepted: 04/05/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND AND OBJECTIVE Malignant ventricular arrhythmias (MAs) occur unpredictably and lead to emergencies. A new approach that uses a timely tracking device e.g., photoplethysmogram (PPG) solely to predict MAs would be irreplaceably valuable and it is natural to expect the approach can predict the occurrence as early as possible. METHOD We assumed that with an appropriate metric based on signal complexity, the heartbeat interval time series (HbIs) can be used to manifest the intrinsic characteristics of the period immediately precedes the MAs (preMAs). The approach first characterizes the patterns of preMAs by a new complexity metric (the refined composite multi-scale entropy). The MAs detector is then constructed by checking the discriminability of the MAs against the sinus rhythm and other prevalent arrhythmias (atrial fibrillation and premature ventricular contraction) of three machine-learning models (SVM, Random Forest, and XGboost). RESULTS Two specifications are of interest: the length of the HbIs needed to delineate the preMAs patterns sufficiently (lspec) and how long before the occurrence of MAs will the HbIs manifest specific patterns that are distinct enough to predict the impending MAs (tspec). Our experimental results confirmed the best performance came from a Random-Forest model with an average precision of 99.99% and recall of 88.98% using a HbIs of 800 heartbeats (the lspec), 108 seconds (the tspec) before the occurrence of MAs. CONCLUSION By experimental validation of the unique pattern of the preMAs in HbIs and using it in the machine learning model, we showed the high possibility of MAs prediction in a broader circumstance, which may cover daily healthcare using the alternative sensor in HbIs monitoring. Therefore, this research is theoretically and practically significant in cardiac arrest prevention.
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Affiliation(s)
- Zheng Chen
- Graduate School of Science and Technology, Nara Insitute of Science and Technology, Japan
| | - Naoaki Ono
- Graduate School of Science and Technology, Nara Insitute of Science and Technology, Japan; Data Science Center, Nara Insitute of Science and Technology, Japan
| | - Wei Chen
- Center for Intelligent Medical Electronics, Department of Electronic Engineering, School of Information Science and Technology, Fudan University, Shanghai 200433, China
| | - Toshiyo Tamura
- Institute for Healthcare Robotics, Waseda university, Japan
| | - M D Altaf-Ul-Amin
- Graduate School of Science and Technology, Nara Insitute of Science and Technology, Japan
| | - Shigehiko Kanaya
- Graduate School of Science and Technology, Nara Insitute of Science and Technology, Japan; Data Science Center, Nara Insitute of Science and Technology, Japan
| | - Ming Huang
- Graduate School of Science and Technology, Nara Insitute of Science and Technology, Japan.
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Parsi A, Glavin M, Jones E, Byrne D. Prediction of paroxysmal atrial fibrillation using new heart rate variability features. Comput Biol Med 2021; 133:104367. [PMID: 33866252 DOI: 10.1016/j.compbiomed.2021.104367] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 03/09/2021] [Accepted: 03/29/2021] [Indexed: 02/01/2023]
Abstract
Paroxysmal atrial fibrillation (PAF) is a cardiac arrhythmia that can eventually lead to heart failure or stroke if left untreated. Early detection of PAF is therefore crucial to prevent any further complications and avoid fatalities. An implantable defibrillator device could be used to both detect and treat the condition though such devices have limited computational capability. With this constraint in mind, this paper presents a novel set of features to accurately predict the presence of PAF. The method is evaluated using ECG signals from the widely used atrial fibrillation prediction database (AFPDB) from PhysioNet. We analysed 106 signals from 53 pairs of ECG recordings. Each pair of signals contains one 5-min ECG segment that ends just before the onset of a PAF event and another 5-min ECG segment at least 45 min distant from the PAF event, to represent a non-PAF event. Seven novel features are extracted through the Poincaré representation of R-R interval signals, and are prioritised through feature ranking schemes. The features are used with four standard classification techniques for PAF prediction and compared to the existing state of the art from the literature. Using only the seven proposed features, classification performance outperforms those of the classical state-of-the-art feature set, registering sensitivity and specificity measurements of over 96%. The results further improve when the features are combined with several of the classical features, with an accuracy increasing to 98% using a linear kernel SVM. The results show that the proposed features provide a useful representation of the PAF condition and achieve good prediction with off-the-shelf classification techniques that would be suitable for ICU deployment.
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Affiliation(s)
- Ashkan Parsi
- National University of Ireland (NUI) Galway, Galway, H91 TK33, Ireland.
| | - Martin Glavin
- National University of Ireland (NUI) Galway, Galway, H91 TK33, Ireland.
| | - Edward Jones
- National University of Ireland (NUI) Galway, Galway, H91 TK33, Ireland.
| | - Dallan Byrne
- National University of Ireland (NUI) Galway, Galway, H91 TK33, Ireland.
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Parsi A, Byrne D, Glavin M, Jones E. Heart rate variability feature selection method for automated prediction of sudden cardiac death. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2020.102310] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Tsuji T, Nobukawa T, Mito A, Hirano H, Soh Z, Inokuchi R, Fujita E, Ogura Y, Kaneko S, Nakamura R, Saeki N, Kawamoto M, Yoshizumi M. Recurrent probabilistic neural network-based short-term prediction for acute hypotension and ventricular fibrillation. Sci Rep 2020; 10:11970. [PMID: 32686705 PMCID: PMC7371879 DOI: 10.1038/s41598-020-68627-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Accepted: 06/30/2020] [Indexed: 11/10/2022] Open
Abstract
In this paper, we propose a novel method for predicting acute clinical deterioration triggered by hypotension, ventricular fibrillation, and an undiagnosed multiple disease condition using biological signals, such as heart rate, RR interval, and blood pressure. Efforts trying to predict such acute clinical deterioration events have received much attention from researchers lately, but most of them are targeted to a single symptom. The distinctive feature of the proposed method is that the occurrence of the event is manifested as a probability by applying a recurrent probabilistic neural network, which is embedded with a hidden Markov model and a Gaussian mixture model. Additionally, its machine learning scheme allows it to learn from the sample data and apply it to a wide range of symptoms. The performance of the proposed method was tested using a dataset provided by Physionet and the University of Tokyo Hospital. The results show that the proposed method has a prediction accuracy of 92.5% for patients with acute hypotension and can predict the occurrence of ventricular fibrillation 5 min before it occurs with an accuracy of 82.5%. In addition, a multiple disease condition can be predicted 7 min before they occur, with an accuracy of over 90%.
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Affiliation(s)
- Toshio Tsuji
- Graduate School of Advanced Science and Engineering, Hiroshima University, 1-4-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8527, Japan.
| | - Tomonori Nobukawa
- Graduate School of Engineering, Hiroshima University, 1-4-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8527, Japan
| | - Akihisa Mito
- Graduate School of Engineering, Hiroshima University, 1-4-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8527, Japan
| | - Harutoyo Hirano
- Academic Institute, College of Engineering, Shizuoka University, 3-5-1, Johoku, Naka-ku, Hamamatsu, Shizuoka, 432-8561, Japan
| | - Zu Soh
- Graduate School of Advanced Science and Engineering, Hiroshima University, 1-4-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8527, Japan
| | - Ryota Inokuchi
- Department of Emergency and Critical Care Medicine, JR General Hospital, 2-1-3 Yoyogi, Shibuya-ku, Tokyo, 151-8528, Japan
| | - Etsunori Fujita
- Delta Kogyo Co. Ltd., 1-14 Shinchi, Fuchu-Cho, Aki-Gun, Hiroshima, 735-8501, Japan
| | - Yumi Ogura
- Delta Kogyo Co. Ltd., 1-14 Shinchi, Fuchu-Cho, Aki-Gun, Hiroshima, 735-8501, Japan
| | - Shigehiko Kaneko
- Department of Mechanical Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-Ku, Tokyo, 113-8656, Japan
| | - Ryuji Nakamura
- Graduate School of Biomedical and Health Sciences, Hiroshima University, 1-2-3 Kasumi, Minami-Ku, Hiroshima, Hiroshima, 734-8553, Japan
| | - Noboru Saeki
- Graduate School of Biomedical and Health Sciences, Hiroshima University, 1-2-3 Kasumi, Minami-Ku, Hiroshima, Hiroshima, 734-8553, Japan
| | - Masashi Kawamoto
- Graduate School of Biomedical and Health Sciences, Hiroshima University, 1-2-3 Kasumi, Minami-Ku, Hiroshima, Hiroshima, 734-8553, Japan
| | - Masao Yoshizumi
- Graduate School of Biomedical and Health Sciences, Hiroshima University, 1-2-3 Kasumi, Minami-Ku, Hiroshima, Hiroshima, 734-8553, Japan
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Liu SH, Lo LW, Tsai TY, Cheng WH, Lin YJ, Chang SL, Hu YF, Chung FP, Chao TF, Liao JN, Lo MT, Tarng DC, Chen SA. Circadian rhythm dynamics on multiscale entropy identifies autonomic dysfunction associated with risk of ventricular arrhythmias and near syncope in chronic kidney disease. J Cardiol 2020; 76:542-548. [PMID: 32631644 DOI: 10.1016/j.jjcc.2020.05.017] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Revised: 05/11/2020] [Accepted: 05/27/2020] [Indexed: 11/25/2022]
Abstract
BACKGROUND A discordant biological clock could potentially induce sudden cardiac death (SCD). We aimed to evaluate the circadian change of heart rate variability (HRV) and its relationship to the risks of ventricular arrhythmia (VA) and near syncope in patients with chronic kidney disease (CKD). METHODS In this retrospective study, non-CKD and CKD patients were enrolled and underwent a 24-hour Holter examination for linear and nonlinear HRV analyses. The multiscale entropy (MSE) method was selected for nonlinear HRV analyses. The documented VAs or episodes of near syncope were classified as high-risk SCD group (n=8) and others as low-risk SCD group (n=21). RESULTS In linear analyses, time and frequency domains revealed no significant difference between groups. In nonlinear analyses with MSE, MSE5, MSE6-20, and MSEslope 5 were significantly lower (p=0.002, p<0.0001, and p=0.013) in the high-risk SCD group, compared to those in the low-risk SCD group, respectively. Comparing between daytime and nighttime within each group, the MSE5 revealed no difference in the high-risk SCD group (p=0.128), whereas the daytime was significantly higher in the low-risk SCD group (p=0.048). The area under the curve (AUC) analysis revealed MSE6-20 has the best predictive power associated with VAs and near syncope with a cut-off value of ≤24.64 (p<0.001). CONCLUSIONS Nonlinear analysis with MSE demonstrated the loss of circadian change in CKD patients and was associated with a higher risk for VAs and near syncope. The MSE method demonstrated the diurnal change of rhythm dynamics which identifies potential autonomic dysfunction leading to poor prognosis.
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Affiliation(s)
- Shin-Huei Liu
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Li-Wei Lo
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan.
| | - Tsung-Ying Tsai
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan
| | - Wen-Han Cheng
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Yenn-Jiang Lin
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Shih-Lin Chang
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Yu-Feng Hu
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Fa-Po Chung
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Tze-Fan Chao
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Jo-Nan Liao
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
| | - Men-Tzung Lo
- Department of Biomedical Sciences and Engineering and Institute of Translational and Interdisciplinary Medicine, National Central University, Taiwan
| | - Der-Cherng Tarng
- Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan; Division of Nephrology, Taipei Veterans General Hospital, Taipei, Taiwan.
| | - Shih-Ann Chen
- Division of Cardiology, Taipei Veterans General Hospital, Taipei, Taiwan; Institute of Clinical Medicine, and Cardiovascular Research Institute, National Yang-Ming University, Taipei, Taiwan
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ECG-based prediction algorithm for imminent malignant ventricular arrhythmias using decision tree. PLoS One 2020; 15:e0231635. [PMID: 32407335 PMCID: PMC7224460 DOI: 10.1371/journal.pone.0231635] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2019] [Accepted: 03/28/2020] [Indexed: 02/01/2023] Open
Abstract
Spontaneous prediction of malignant ventricular arrhythmia (MVA) is useful to avoid delay in rescue operations. Recently, researchers have developed several algorithms to predict MVA using various features derived from electrocardiogram (ECG). However, there are several unresolved issues regarding MVA prediction such as the effect of number of ECG features on a prediction remaining unclear, possibility that an alert for occurring MVA may arrive very late and uncertainty in the performance of the algorithm predicting MVA minutes before onset. To overcome the aforementioned problems, this research conducts an in-depth study on the number and types of ECG features that are implemented in a decision tree classifier. In addition, this research also investigates an algorithm's execution time before the occurrence of MVA to minimize delays in warnings for MVA. Lastly, this research aims to study both the sensitivity and specificity of an algorithm to reveal the performance of MVA prediction algorithms from time to time. To strengthen the results of analysis, several classifiers such as support vector machine and naive Bayes are also examined for the purpose of comparison study. There are three phases required to achieve the objectives. The first phase is literature review on existing relevant studies. The second phase deals with design and development of four modules for predicting MVA. Rigorous experiments are performed in the feature selection and classification modules. The results show that eight ECG features with decision tree classifier achieved good prediction performance in terms of execution time and sensitivity. In addition, the results show that the highest percentage for sensitivity and specificity is 95% and 90% respectively, in the fourth 5-minute interval (15.1 minutes-20 minutes) that preceded the onset of an arrhythmia event. Such results imply that the fourth 5-minute interval would be the best time to perform prediction.
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Parsi A, O'Loughlin D, Glavin M, Jones E. Heart Rate Variability Analysis to Predict Onset of Ventricular Tachyarrhythmias in Implantable Cardioverter Defibrillators. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:6770-6775. [PMID: 31947395 DOI: 10.1109/embc.2019.8857911] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Implantable cardioverter defibrillators (ICDs) are commonly used in patients at high risk of sudden cardiac death (SCD) to help prevent and treat life-threatening arrhythmia. Up to 80% of cases of sudden cardiac death are caused by ventricular tachyarrhythmias (VTA) and the accurate prediction of VTA in patients with ICDs can help prevent SCD. Early prediction allows tiered and less invasive therapies to be used to help prevent VTA which are more easily tolerated by the patient and are less battery intensive. In this work, a comparative study of three types of frequency domain features (spectral, bispectrum, and Fourier-Bessel) for VTA prediction is presented based on heart rate variability (HRV) signals between one and five minutes prior to known SCD. Using Fourier-Bessel features and a standard classification approach resulted in the best performance of 87.5% accuracy, 89.3% sensitivity and 85.7% specificity. These results suggest that Fourier-Bessel features are a promising approach for SCD prediction, and that new feature development can help improve both the sensitivity and specificity of SCD prediction in ICDs.
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Parsi A, O'Loughlin D, Glavin M, Jones E. Prediction of Sudden Cardiac Death in Implantable Cardioverter Defibrillators: A Review and Comparative Study of Heart Rate Variability Features. IEEE Rev Biomed Eng 2019; 13:5-16. [PMID: 31021774 DOI: 10.1109/rbme.2019.2912313] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Over the last four decades, implantable cardioverter defibrillators (ICDs) have been widely deployed to reduce sudden cardiac death (SCD) risk in patients with a history of life-threatening arrhythmia. By continuous monitoring of the heart rate, ICDs can use decision algorithms to distinguish normal cardiac sinus rhythm or supra-ventricular tachycardia from abnormal cardiac rhythms like ventricular tachycardia and ventricular fibrillation and deliver appropriate therapy such as an electrical stimulus. Despite the success of ICDs, more research is still needed, particularly in decision-making algorithms. Because of low specificity in practical devices, patients with ICDs still receive inappropriate shocks, which may lead to inadvertent mortality and reduction of quality of life. At the same time, higher sensitivity can lead to the use of newer tiered therapies. The purpose of this study is to review the literature on common signal features used in detection algorithms for abnormal cardiac sinus rhythm, as well as reviewing datasets used for algorithm development in previous studies. More than 50 different features to address heart rate changes before SCD have been reviewed and general methodology on this area proposed based on variety of studies on ICDs functionality. A comparative study on the prediction performance of these features, using a common database, is also presented. By combining these features with a support vector machine classifier, achieved results have compared well with other studies.
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Wilson D, Ermentrout B. Stochastic Pacing Inhibits Spatially Discordant Cardiac Alternans. Biophys J 2017; 113:2552-2572. [PMID: 29212008 DOI: 10.1016/j.bpj.2017.10.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2017] [Revised: 09/28/2017] [Accepted: 10/02/2017] [Indexed: 12/19/2022] Open
Abstract
Depressed heart rate variability is a well-established risk factor for sudden cardiac death in survivors of acute myocardial infarction and for those with congestive heart failure. Although measurements of heart rate variability provide a valuable prognostic tool, it is unclear whether reduced heart rate variability itself is proarrhythmic or if it simply correlates with the severity of autonomic nervous system dysfunction. In this work, we investigate a possible mechanism by which heart rate variability could protect against cardiac arrhythmia. Specifically, in numerical simulations, we observe an inverse relationship between the variance of stochastic pacing and the occurrence of spatially discordant alternans, an arrhythmia that is widely believed to facilitate the development of cardiac fibrillation. By analyzing the effects of conduction velocity restitution, cellular dynamics, electrotonic coupling, and stochastic pacing on the nodal dynamics of spatially discordant alternans, we provide intuition for this observed behavior and propose control strategies to inhibit discordant alternans.
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Affiliation(s)
- Dan Wilson
- Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania.
| | - Bard Ermentrout
- Department of Mathematics, University of Pittsburgh, Pittsburgh, Pennsylvania
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Abstract
OBJECTIVES Tachycardia is common in septic shock, but many patients with septic shock are relatively bradycardic. The prevalence, determinants, and implications of relative bradycardia (heart rate, < 80 beats/min) in septic shock are unknown. To determine mortality associated with patients who are relatively bradycardic while in septic shock. DESIGN Retrospective study of patients admitted for septic shock to study ICUs during 2005-2013. SETTING One large academic referral hospital and two community hospitals. PATIENTS Adult patients with septic shock requiring vasopressors. INTERVENTION None. MEASUREMENTS Primary outcome was 28-day mortality. We used multivariate logistic regression to evaluate the association between relative bradycardia and mortality, controlling for confounding with inverse probability treatment weighting using a propensity score. RESULTS We identified 1,554 patients with septic shock, of whom 686 (44%) met criteria for relative bradycardia at some time. Twenty-eight-day mortality in this group was 21% compared to 34% in the never-bradycardic group (p < 0.001). Relatively bradycardic patients were older (65 vs 60 yr; p < 0.001) and had slightly lower illness severity (Sequential Organ Failure Assessment, 10 vs 11; p = 0.004; and Acute Physiology and Chronic Health Evaluation II, 27 vs 28; p = 0.008). After inverse probability treatment weighting, covariates were balanced, and the association between relative bradycardia and survival persisted (p < 0.001). CONCLUSIONS Relative bradycardia in patients with septic shock is associated with lower mortality, even after adjustment for confounding. Our data support expanded investigation into whether inducing relative bradycardia will benefit patients with septic shock.
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