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For: Gunawardena J. Beware the tail that wags the dog: informal and formal models in biology. Mol Biol Cell 2015;25:3441-4. [PMID: 25368417 PMCID: PMC4230599 DOI: 10.1091/mbc.e14-02-0717] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
Number Cited by Other Article(s)
1
França TFA. Exploring undiscovered public knowledge in neuroscience. Eur J Neurosci 2024;60:4723-4737. [PMID: 38782707 DOI: 10.1111/ejn.16396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Revised: 04/21/2024] [Accepted: 05/03/2024] [Indexed: 05/25/2024]
2
Nieto F, Garrido F, Dinamarca S, Cebrian I, Mayorga LS. Kinetics of antigen cross-presentation assessed experimentally and by a model of the complete endomembrane system. Cell Immunol 2022;382:104636. [PMID: 36399818 DOI: 10.1016/j.cellimm.2022.104636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 10/18/2022] [Accepted: 10/24/2022] [Indexed: 11/08/2022]
3
Quiros DN, Nieto F, Mayorga LS. From cartoons to quantitative models in Golgi transport. Biol Cell 2020;113:146-164. [PMID: 33275796 DOI: 10.1111/boc.202000107] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 11/29/2020] [Indexed: 11/29/2022]
4
Mayorga LS, Cebrian I, Verma M, Hoops S, Bassaganya-Riera J. Reconstruction of endosomal organization and function by a combination of ODE and agent-based modeling strategies. Biol Direct 2018;13:25. [PMID: 30621747 PMCID: PMC6883406 DOI: 10.1186/s13062-018-0227-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2018] [Accepted: 10/16/2018] [Indexed: 11/10/2022]  Open
5
Gilbert SF. Achilles and the tortoise: Some caveats to mathematical modeling in biology. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2018;137:37-45. [PMID: 29366714 DOI: 10.1016/j.pbiomolbio.2018.01.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Revised: 01/13/2018] [Accepted: 01/17/2018] [Indexed: 11/29/2022]
6
Mayorga LS, Verma M, Hontecillas R, Hoops S, Bassaganya-Riera J. Agents and networks to model the dynamic interactions of intracellular transport. CELLULAR LOGISTICS 2017;7:e1392401. [PMID: 29296512 DOI: 10.1080/21592799.2017.1392401] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Revised: 10/03/2017] [Accepted: 10/10/2017] [Indexed: 01/28/2023]
7
Bentovim L, Harden TT, DePace AH. Transcriptional precision and accuracy in development: from measurements to models and mechanisms. Development 2017;144:3855-3866. [PMID: 29089359 PMCID: PMC5702068 DOI: 10.1242/dev.146563] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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