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For: Mao W, Rahimikollu J, Hausler R, Chikina M. DataRemix: a universal data transformation for optimal inference from gene expression datasets. Bioinformatics 2021;37:984-991. [PMID: 32821903 DOI: 10.1093/bioinformatics/btaa745] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Revised: 08/01/2020] [Accepted: 08/17/2020] [Indexed: 11/12/2022]  Open
Number Cited by Other Article(s)
1
Zhao X, Liu T, Wang G. Ensemble classification based signature discovery for cancer diagnosis in RNA expression profiles across different platforms. Brief Bioinform 2022;23:6590877. [PMID: 35605226 DOI: 10.1093/bib/bbac185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 04/21/2022] [Accepted: 04/23/2022] [Indexed: 11/13/2022]  Open
2
Johnson KA, Krishnan A. Robust normalization and transformation techniques for constructing gene coexpression networks from RNA-seq data. Genome Biol 2022;23:1. [PMID: 34980209 PMCID: PMC8721966 DOI: 10.1186/s13059-021-02568-9] [Citation(s) in RCA: 65] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Accepted: 12/06/2021] [Indexed: 12/13/2022]  Open
3
Bhattacharya A, Hamilton AM, Furberg H, Pietzak E, Purdue MP, Troester MA, Hoadley KA, Love MI. An approach for normalization and quality control for NanoString RNA expression data. Brief Bioinform 2021;22:bbaa163. [PMID: 32789507 PMCID: PMC8138885 DOI: 10.1093/bib/bbaa163] [Citation(s) in RCA: 72] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Revised: 06/29/2020] [Accepted: 06/30/2020] [Indexed: 01/10/2023]  Open
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