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For: Wang K, Li Z, You ZH, Han P, Nie R. Adversarial dense graph convolutional networks for single-cell classification. Bioinformatics 2023;39:6994183. [PMID: 36661313 PMCID: PMC9919433 DOI: 10.1093/bioinformatics/btad043] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 12/30/2022] [Accepted: 01/19/2023] [Indexed: 01/21/2023]  Open
Number Cited by Other Article(s)
1
Sheng X, Cai H, Nie Y, He S, Cheung YM, Chen J. Modality-Aware Discriminative Fusion Network for Integrated Analysis of Brain Imaging Genomics. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2025;36:8577-8591. [PMID: 39178069 DOI: 10.1109/tnnls.2024.3439530] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/25/2024]
2
Dai Q, Liu W, Yu X, Duan X, Liu Z. Self-Supervised Graph Representation Learning for Single-Cell Classification. Interdiscip Sci 2025:10.1007/s12539-025-00700-y. [PMID: 40180773 DOI: 10.1007/s12539-025-00700-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 03/02/2025] [Accepted: 03/04/2025] [Indexed: 04/05/2025]
3
Li S, Hua H, Chen S. Graph neural networks for single-cell omics data: a review of approaches and applications. Brief Bioinform 2025;26:bbaf109. [PMID: 40091193 PMCID: PMC11911123 DOI: 10.1093/bib/bbaf109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2024] [Revised: 02/09/2025] [Accepted: 02/25/2025] [Indexed: 03/19/2025]  Open
4
Huang YA, Li YC, You ZH, Hu L, Hu PW, Wang L, Peng Y, Huang ZA. Consensus representation of multiple cell-cell graphs from gene signaling pathways for cell type annotation. BMC Biol 2025;23:23. [PMID: 39849579 PMCID: PMC11756145 DOI: 10.1186/s12915-025-02128-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Accepted: 01/13/2025] [Indexed: 01/25/2025]  Open
5
Knudsen JE, Rich JM, Ma R. Artificial Intelligence in Pathomics and Genomics of Renal Cell Carcinoma. Urol Clin North Am 2024;51:47-62. [PMID: 37945102 DOI: 10.1016/j.ucl.2023.06.002] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2023]
6
Chen Y, Zheng R, Liu J, Li M. scMLC: an accurate and robust multiplex community detection method for single-cell multi-omics data. Brief Bioinform 2024;25:bbae101. [PMID: 38493339 PMCID: PMC10944569 DOI: 10.1093/bib/bbae101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2023] [Revised: 01/03/2024] [Accepted: 02/15/2024] [Indexed: 03/18/2024]  Open
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