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For: Hou L, Wang L, Qian M, Li D, Tang C, Zhu Y, Deng M, Li F. Modular analysis of the probabilistic genetic interaction network. ACTA ACUST UNITED AC 2011;27:853-9. [PMID: 21278184 PMCID: PMC3051332 DOI: 10.1093/bioinformatics/btr031] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Number Cited by Other Article(s)
1
Li B, Liu J, Yu Y, Wang P, Zhang Y, Ni X, Liu Q, Zhang X, Wang Z, Wang Y. Network-Wide Screen Identifies Variation of Novel Precise On-Module Targets Using Conformational Modudaoism. CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY 2017;7:16-25. [PMID: 28925077 PMCID: PMC5784734 DOI: 10.1002/psp4.12253] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2017] [Revised: 08/30/2017] [Accepted: 09/13/2017] [Indexed: 01/30/2023]
2
Xu Y, Guo M, Liu X, Wang C, Liu Y, Liu G. Identify bilayer modules via pseudo-3D clustering: applications to miRNA-gene bilayer networks. Nucleic Acids Res 2016;44:e152. [PMID: 27484480 PMCID: PMC5741208 DOI: 10.1093/nar/gkw679] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2015] [Revised: 06/30/2016] [Accepted: 07/18/2016] [Indexed: 12/11/2022]  Open
3
Quantitative assessment of gene expression network module-validation methods. Sci Rep 2015;5:15258. [PMID: 26470848 PMCID: PMC4607977 DOI: 10.1038/srep15258] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2015] [Accepted: 09/21/2015] [Indexed: 02/01/2023]  Open
4
Prediction of dynamical drug sensitivity and resistance by module network rewiring-analysis based on transcriptional profiling. Drug Resist Updat 2014;17:64-76. [PMID: 25156319 DOI: 10.1016/j.drup.2014.08.002] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
5
Chen Y, Wang Z, Wang Y. Spatiotemporal positioning of multipotent modules in diverse biological networks. Cell Mol Life Sci 2014;71:2605-24. [PMID: 24413666 PMCID: PMC11113103 DOI: 10.1007/s00018-013-1547-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2013] [Revised: 12/05/2013] [Accepted: 12/19/2013] [Indexed: 02/06/2023]
6
Kortagere S, Lill M, Kerrigan J. Role of computational methods in pharmaceutical sciences. Methods Mol Biol 2012;929:21-48. [PMID: 23007425 DOI: 10.1007/978-1-62703-050-2_3] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2022]
7
Casey F, Krogan N, Shields DC, Cagney G. Distinct configurations of protein complexes and biochemical pathways revealed by epistatic interaction network motifs. BMC SYSTEMS BIOLOGY 2011;5:133. [PMID: 21859460 PMCID: PMC3176491 DOI: 10.1186/1752-0509-5-133] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2011] [Accepted: 08/22/2011] [Indexed: 11/24/2022]
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