• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (5080897)   Today's Articles (1074)
For: Mohammadi S, Grama A. A convex optimization approach for identification of human tissue-specific interactomes. Bioinformatics 2017;32:i243-i252. [PMID: 27307623 PMCID: PMC4908329 DOI: 10.1093/bioinformatics/btw245] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
Number Cited by Other Article(s)
1
Quantitative Susceptibility Mapping in Cognitive Decline: A Review of Technical Aspects and Applications. Cognit Comput 2022. [DOI: 10.1007/s12559-022-10095-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
2
Coombe L, Li JX, Lo T, Wong J, Nikolic V, Warren RL, Birol I. LongStitch: high-quality genome assembly correction and scaffolding using long reads. BMC Bioinformatics 2021;22:534. [PMID: 34717540 PMCID: PMC8557608 DOI: 10.1186/s12859-021-04451-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Accepted: 10/19/2021] [Indexed: 12/12/2022]  Open
3
Mohammadi S, Davila-Velderrain J, Kellis M. Reconstruction of Cell-type-Specific Interactomes at Single-Cell Resolution. Cell Syst 2019;9:559-568.e4. [PMID: 31786210 PMCID: PMC6943823 DOI: 10.1016/j.cels.2019.10.007] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 07/13/2019] [Accepted: 10/22/2019] [Indexed: 01/03/2023]
4
Wang J, Hossain MS, Lyu Z, Schmutz J, Stacey G, Xu D, Joshi T. SoyCSN: Soybean context-specific network analysis and prediction based on tissue-specific transcriptome data. PLANT DIRECT 2019;3:e00167. [PMID: 31549018 PMCID: PMC6747016 DOI: 10.1002/pld3.167] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 08/12/2019] [Accepted: 08/20/2019] [Indexed: 05/04/2023]
5
Manekar SC, Sathe SR. Estimating the k-mer Coverage Frequencies in Genomic Datasets: A Comparative Assessment of the State-of-the-art. Curr Genomics 2019;20:2-15. [PMID: 31015787 PMCID: PMC6446480 DOI: 10.2174/1389202919666181026101326] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Revised: 10/05/2018] [Accepted: 10/24/2018] [Indexed: 12/24/2022]  Open
6
Sibbesen JA, Maretty L, Krogh A. Accurate genotyping across variant classes and lengths using variant graphs. Nat Genet 2018;50:1054-1059. [PMID: 29915429 DOI: 10.1038/s41588-018-0145-5] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 04/20/2018] [Indexed: 12/30/2022]
7
Drug repositioning based on triangularly balanced structure for tissue-specific diseases in incomplete interactome. Artif Intell Med 2017;77:53-63. [DOI: 10.1016/j.artmed.2017.03.009] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2016] [Revised: 01/06/2017] [Accepted: 03/17/2017] [Indexed: 01/16/2023]
8
Stanfield Z, Coşkun M, Koyutürk M. Drug Response Prediction as a Link Prediction Problem. Sci Rep 2017;7:40321. [PMID: 28067293 PMCID: PMC5220354 DOI: 10.1038/srep40321] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Accepted: 12/01/2016] [Indexed: 12/23/2022]  Open
9
Yu L, Wang B, Ma X, Gao L. The extraction of drug-disease correlations based on module distance in incomplete human interactome. BMC SYSTEMS BIOLOGY 2016;10:111. [PMID: 28155709 PMCID: PMC5260043 DOI: 10.1186/s12918-016-0364-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
PrevPage 1 of 1 1Next
© 2004-2025 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA