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For: Wei W, Ye YN, Luo S, Deng YY, Lin D, Guo FB. IFIM: a database of integrated fitness information for microbial genes. Database (Oxford) 2014;2014:bau052. [PMID: 24923821 PMCID: PMC4207227 DOI: 10.1093/database/bau052] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Number Cited by Other Article(s)
1
Guo HX, Zhu SB, Deng Z, Guo FB. EcoliGD: An Online Tool for Designing Escherichia coli Genome. ACS Synth Biol 2022;11:2267-2274. [PMID: 35770895 DOI: 10.1021/acssynbio.2c00165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
2
Adaptation of commensal proliferating Escherichia coli to the intestinal tract of young children with cystic fibrosis. Proc Natl Acad Sci U S A 2018;115:1605-1610. [PMID: 29378945 DOI: 10.1073/pnas.1714373115] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
3
Selection for energy efficiency drives strand-biased gene distribution in prokaryotes. Sci Rep 2017;7:10572. [PMID: 28874819 PMCID: PMC5585166 DOI: 10.1038/s41598-017-11159-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2017] [Accepted: 08/18/2017] [Indexed: 01/08/2023]  Open
4
Wei W, Jin YT, Du MZ, Wang J, Rao N, Guo FB. Genomic Complexity Places Less Restrictions on the Evolution of Young Coexpression Networks than Protein-Protein Interactions. Genome Biol Evol 2016;8:2624-31. [PMID: 27521813 PMCID: PMC5010916 DOI: 10.1093/gbe/evw198] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
5
Zheng WX, Luo CS, Deng YY, Guo FB. Essentiality drives the orientation bias of bacterial genes in a continuous manner. Sci Rep 2015;5:16431. [PMID: 26560889 PMCID: PMC4642330 DOI: 10.1038/srep16431] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2015] [Accepted: 10/13/2015] [Indexed: 12/04/2022]  Open
6
Zhang X, Peng C, Zhang G, Gao F. Comparative analysis of essential genes in prokaryotic genomic islands. Sci Rep 2015. [PMID: 26223387 PMCID: PMC4519734 DOI: 10.1038/srep12561] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
7
Hua ZG, Lin Y, Yuan YZ, Yang DC, Wei W, Guo FB. ZCURVE 3.0: identify prokaryotic genes with higher accuracy as well as automatically and accurately select essential genes. Nucleic Acids Res 2015;43:W85-90. [PMID: 25977299 PMCID: PMC4489317 DOI: 10.1093/nar/gkv491] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2015] [Accepted: 05/02/2015] [Indexed: 01/09/2023]  Open
8
Three computational tools for predicting bacterial essential genes. Methods Mol Biol 2015;1279:205-17. [PMID: 25636621 DOI: 10.1007/978-1-4939-2398-4_13] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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