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Ashokan M, Rana E, Sneha K, Namith C, Naveen Kumar GS, Azharuddin N, Elango K, Jeyakumar S, Ramesha KP. Metabolomics-a powerful tool in livestock research. Anim Biotechnol 2023; 34:3237-3249. [PMID: 36200897 DOI: 10.1080/10495398.2022.2128814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Abstract
Advancements in the Nuclear Magnetic Resonance (NMR) and Mass Spectrometry (MS) along with recent developments in omics sciences have resulted in a better understanding of molecular mechanisms and pathways associated with the physio-pathological state of the animal. Metabolomics is a post-genomics tool that deals with small molecular metabolites in a given set of time which provides clear information about the status of an organism. Recently many researchers mainly focus their research on metabolomics studies due to its valuable information in the various fields of livestock management and precision dairying. The main aim of the present review is to provide an insight into the current research output from different sources and application of metabolomics in various areas of livestock including nutri-metabolomics, disease diagnosis advancements, reproductive disorders, pharmaco-metabolomics, genomics studies, and dairy production studies. The present review would be helpful in understanding the metabolomics methodologies and use of livestock metabolomics in various areas in a brief way.
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Affiliation(s)
- M Ashokan
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
- Animal Genetics and Breeding Division, Hassan Veterinary College, Hassan, India
- Department of Animal Husbandry, Cattle Breeding and Fodder Development, Thiruvarur, India
| | - Ekta Rana
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
| | - Kadimetla Sneha
- Animal Genetics and Breeding Division, Hassan Veterinary College, Hassan, India
| | - C Namith
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
| | - G S Naveen Kumar
- Animal Genetics and Breeding Division, Hassan Veterinary College, Hassan, India
| | - N Azharuddin
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
| | - K Elango
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
| | - S Jeyakumar
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
| | - K P Ramesha
- Southern Regional Station, ICAR-National Dairy Research Institute, Bangalore, India
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Song Y, Wang H, Sun R, Chang J, Tang J, Bai Y, Xia C. Serum Metabolic Characterization of Vitamin E Deficiency in Holstein Cows during the Transition Period Based on Proton Nuclear Magnetic Resonance Spectroscopy. Animals (Basel) 2023; 13:2957. [PMID: 37760357 PMCID: PMC10525730 DOI: 10.3390/ani13182957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 09/03/2023] [Accepted: 09/06/2023] [Indexed: 09/29/2023] Open
Abstract
Vitamin E, a potent antioxidant, is a necessary and complex micronutrient for cows. During the transition period, vitamin E deficiency (VED) is among the highest prevalent micronutrient deficits in dairy cows. It may eventually result in oxidative stress and immunological malfunction, and it increases the risk of peripartum disorders. At present, detailed data on blood metabolites in VED cows are limited. Consequently, the purpose of this research was to examine the alterations in the serum metabolic profile of VED cows throughout the early postpartum period. Using comprehensive 1H nuclear magnetic resonance (1H NMR), the alterations in serum metabolic activities of VED cows were analyzed. In total, 28 multiparous Holstein cows were assigned according to serum α-tocopherol (α-Toc) concentrations into normal (α-Toc ≥ 4 μg/mL, n = 14) and VED (α-Toc < 3 μg/mL, n = 14) groups at 21 days postpartum, and their blood samples were collected for biochemical and 1H NMR analyses. A t-test on independent samples as well as multivariate statistics were used to assess the findings. In comparison with normal cows, VED cows showed significantly worse body condition scores, milk yield, and dry matter intake (p < 0.05). Significantly higher levels of serum non-esterified fatty acids, aspartate aminotransferase, low-density lipoprotein, and malonaldehyde were found in VED-affected cows, as well as lesser concentrations of serum albumin, high-density lipoprotein, and total antioxidant capacity in comparison with normal cows (p < 0.01), while other vitamins and minerals concentrations showed no distinction between the groups (p > 0.05). Furthermore, 24 upregulated serum metabolites were identified under VED conditions. The metabolomics pathway analysis of these metabolites demonstrated that a global metabolic response to VED in cows was represented by changes in 11 metabolic pathways, comprising energy, carbohydrate, and amino acid metabolism. From these results, we conclude that VED cows were more likely to experience a negative energy balance characterized by alterations of common systemic metabolic processes and develop oxidative stress, inflammation, and ultimately liver injury. This study provides the first evidence of metabolic changes in cows with VED.
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Affiliation(s)
| | | | | | | | | | | | - Cheng Xia
- College of Animal Science and Veterinary Medicine, Heilongjiang Bayi Agricultural University, Daqing 163319, China; (Y.S.); (H.W.); (R.S.); (J.C.); (J.T.); (Y.B.)
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Bahadori-Moghaddam M, Kargar S, Kanani M, Zamiri MJ, Arefi-Oskouie A, Albenzio M, Caroprese M, Ciliberti MG, Ghaffari MH. Effects of extended transition milk feeding on blood metabolites of female Holstein dairy calves at 3 weeks of age: a liquid chromatography with tandem mass spectrometry-based metabolomics approach. Animal 2023; 17:100844. [PMID: 37263134 DOI: 10.1016/j.animal.2023.100844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 04/24/2023] [Accepted: 04/25/2023] [Indexed: 06/03/2023] Open
Abstract
Transition milk (TRM) is a rich source of bioactive components that promotes intestinal development and growth, and reduces the susceptibility to diarrhoea in calves. The objective of this study was to characterise the effects of replacing pasteurised waste milk (none-saleable milk containing antibiotic and/or drug residues) with pasteurised TRM for 3 wk on blood metabolites of dairy calves at 21 d of age. A total of 84 healthy newborn female Holstein calves was blocked by birth order and assigned randomly to four treatment groups with partial replacement of pasteurised waste milk by TRM (second milking after parturition) at 0 (0 L/day TRM + 6 L/day milk), 0.5 (0.5 L/day TRM + 5.5 L/day milk), 1 (1 L/day TRM + 5 L/day milk), or 2 L (2 L/day TRM + 4 L/day milk) for a 21-day period. Serum metabolome was determined by liquid chromatography with tandem mass spectrometry-based metabolomics analysis on a subset of 26 randomly selected individuals from calves fed pasteurised waste milk (CON, 6 L/d milk; n = 13) or TRM (2 L/d TRM + 4 L/d milk; n = 13) at 21 d of age. The identified metabolites (194 out of 265) were categorised according to chemical class and the number of metabolites per class in the serum, amongst which glycerophospholipids 16% (n = 43), fatty acyls 7% (n = 19), organic acids 7% (n = 18), organic heterocyclic compounds 5% (n = 13), benzenoids 5% (n = 12), sphingolipids 5% (n = 12), organic oxygen compounds 4% (n = 11), and nucleic acids 3% (n = 9), were the predominant types. Significant differences in metabolites were determined by the volcano plot. Applying the volcano plot, only two metabolites (ceramide and phosphatidylserine) were significantly different between CON and TRM. Overall, our results suggested that prolonged TRM feeding for 3 wk had little effect on the serum metabolome of the dairy calves. We speculate that the potential effects of feeding TRM for 3 wk compared with waste milk were spatially limited to affect the composition of the local gut microbial community and the growth or function of the intestinal epithelium, not allowing detection of the likely effects in the serum through a metabolomic approach.
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Affiliation(s)
- M Bahadori-Moghaddam
- Department of Animal Science, School of Agriculture, Shiraz University, Shiraz 71441-65186, Iran
| | - S Kargar
- Department of Animal Science, School of Agriculture, Shiraz University, Shiraz 71441-65186, Iran.
| | - M Kanani
- Department of Animal Science, School of Agriculture, Shiraz University, Shiraz 71441-65186, Iran
| | - M J Zamiri
- Department of Animal Science, School of Agriculture, Shiraz University, Shiraz 71441-65186, Iran
| | - A Arefi-Oskouie
- Department of Basic Sciences, Faculty of Paramedical Sciences, Shahid Beheshti University of Medical Sciences, Tehran 19716-53313, Iran
| | - M Albenzio
- Department of Agriculture, Food, Natural Resources, and Engineering (DAFNE), University of Foggia, Via Napoli, 25, 71122 Foggia, Italy
| | - M Caroprese
- Department of Agriculture, Food, Natural Resources, and Engineering (DAFNE), University of Foggia, Via Napoli, 25, 71122 Foggia, Italy
| | - M G Ciliberti
- Department of Agriculture, Food, Natural Resources, and Engineering (DAFNE), University of Foggia, Via Napoli, 25, 71122 Foggia, Italy
| | - M H Ghaffari
- Institute of Animal Science, University of Bonn, 53115 Bonn, Germany
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Gómez E, Murillo A, Carrocera S, Pérez-Jánez JJ, Benedito JL, Martín-González D, Gimeno I. Fitness of calves born from in vitro-produced fresh and cryopreserved embryos. Front Vet Sci 2022; 9:1006995. [PMID: 36504844 PMCID: PMC9730881 DOI: 10.3389/fvets.2022.1006995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 11/01/2022] [Indexed: 11/25/2022] Open
Abstract
In cattle, vitrified/warmed (V/W) and frozen/thawed (F/T), in vitro-produced (IVP) embryos, differ in their physiology and survival from fresh embryos. In this study, we analyzed the effects of embryo cryopreservation techniques on the offspring. IVP embryos cultured with albumin and with or without 0.1% serum until Day 6, and thereafter in single culture without protein, were transferred to recipients on Day 7 as F/T, V/W, or fresh, resulting in N = 24, 14, and 13 calves, respectively. Calves were clinically examined at birth, and blood was analyzed before and after colostrum intake (Day 0), and subsequently on Day 15 and Day 30. On Day 0, calves from V/W and F/T embryos showed increased creatinine and capillary refill time (CRT) and reduced heartbeats. Calves from F/T embryos showed lower PCO2, hemoglobin, and packed cell volume than calves from V/W embryos while V/W embryos led to calves with increased Na+ levels. Colostrum effects did not differ between calves from fresh and cryopreserved embryos, indicating similar adaptive ability among calves. However, PCO2 did not decrease in calves from V/W embryos after colostrum intake. Serum in culture led to calves with affected (P < 0.05) temperature, CRT, HCO 3 - , base excess (BE), TCO2, creatinine, urea, and anion gap. On Day 15, the effects of embryo cryopreservation disappeared among calves. In contrast, Day 30 values were influenced by diarrhea appearance, mainly in calves from V/W embryos (i.e., lower values of TCO2, HCO 3 - , and BE; and increased glucose, anion gap, and lactate), although with no more clinical compromise than calves from fresh and F/T embryos. Diarrhea affected PCO2 and Na+ in all groups. Embryo cryopreservation, and/or culture, yield metabolically different calves, including effects on protein and acid-base metabolism.
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Affiliation(s)
- Enrique Gómez
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), Centro de Biotecnología Animal, Gijón, Spain,*Correspondence: Enrique Gómez
| | - Antonio Murillo
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), Centro de Biotecnología Animal, Gijón, Spain
| | - Susana Carrocera
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), Centro de Biotecnología Animal, Gijón, Spain
| | | | - Jose Luis Benedito
- Department of Animal Pathology, Veterinary School, University of Santiago de Compostela, Lugo, Spain
| | - David Martín-González
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), Centro de Biotecnología Animal, Gijón, Spain
| | - Isabel Gimeno
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA), Centro de Biotecnología Animal, Gijón, Spain
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Guo YS, Tao JZ, Xu LH, Wei FH, He SH. Identification of disordered metabolic networks in postpartum dairy cows with left displacement of the abomasum through integrated metabolomics and pathway analyses. J Vet Med Sci 2019; 82:115-124. [PMID: 31852859 PMCID: PMC7041990 DOI: 10.1292/jvms.19-0378] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
High-producing dairy cows are easily affected by left displacement of the abomasum (LDA)
within 4 weeks postpartum. Although LDA is highly associated with metabolic disturbances,
the related information on comprehensive metabolic changes, with the exception of some
blood biochemical parameters, remains limited. In this study, the changes in plasma
metabolites and in the metabolic profile of postpartum dairy cows with LDA were
investigated through liquid chromatography coupled with quadrupole time of flight mass
spectrometry (LC-Q/TOF-MS)-based metabolomics, and the metabolic networks related to LDA
were constructed through metabolomics pathway analysis (MetPA). An obvious change in the
metabolic profile was reflected by significant variations in 68 plasma metabolites in
postpartum dairy cows with LDA, and these variations consequently altered 13 metabolic
pathways (histidine metabolism, tyrosine metabolism, valine, leucine and isoleucine
biosynthesis, phenylalanine, tyrosine and tryptophan biosynthesis, arginine and proline
metabolism, tryptophan metabolism, synthesis and degradation of ketone bodies, linoleic
acid metabolism, arachidonic acid metabolism, citrate cycle, butanoate metabolism, vitamin
B6 metabolism and pyrimidine metabolism). This study shows that the more
detailed information obtained by LC-Q/TOF-MS-based metabolomics and MetPA might contribute
to a better understanding of the disordered metabolic networks in postpartum dairy cows
with LDA.
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Affiliation(s)
- Yan Sheng Guo
- Department of Animal Science and Technology, Agricultural College, Ningxia University, 425 West Road of Hen lan shan, Xi Xia District, Yinchuan 750021, China
| | - Jin Zhong Tao
- Department of Animal Science and Technology, Agricultural College, Ningxia University, 425 West Road of Hen lan shan, Xi Xia District, Yinchuan 750021, China
| | - Li Hua Xu
- Department of Animal Science and Technology, Agricultural College, Ningxia University, 425 West Road of Hen lan shan, Xi Xia District, Yinchuan 750021, China
| | - Fan Hua Wei
- Department of Animal Science and Technology, Agricultural College, Ningxia University, 425 West Road of Hen lan shan, Xi Xia District, Yinchuan 750021, China
| | - Sheng Hu He
- Department of Animal Science and Technology, Agricultural College, Ningxia University, 425 West Road of Hen lan shan, Xi Xia District, Yinchuan 750021, China
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