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Guo A, Nie H, Li H, Li B, Cheng C, Jiang K, Zhu S, Zhao N, Hua J. The miR3367-lncRNA67-GhCYP724B module regulates male sterility by modulating brassinosteroid biosynthesis and interacting with Aorf27 in Gossypium hirsutum. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2025; 67:169-190. [PMID: 39526576 PMCID: PMC11734110 DOI: 10.1111/jipb.13802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Revised: 09/14/2024] [Accepted: 09/16/2024] [Indexed: 11/16/2024]
Abstract
Cytoplasmic male sterile (CMS) lines play a crucial role in utilization of heterosis in crop plants. However, the mechanism underlying the manipulation of male sterility in cotton by long non-coding RNA (lncRNA) and brassinosteroids (BRs) remains elusive. Here, using an integrative approach combining lncRNA transcriptomic profiles with virus-induced gene silencing experiments, we identify a flower bud-specific lncRNA in the maintainer line 2074B, lncRNA67, negatively modulating with male sterility in upland cotton (Gossypium hirsutum). lncRNA67 positively regulates cytochrome P274B (GhCYP724B), which acted as an eTM (endogenous target mimic) for miR3367. The suppression of GhCYP724B induced symptoms of BR deficiency and male semi-sterility in upland cotton as well as in tobacco, which resulted from a reduction in the endogenous BR contents. GhCYP724B regulates BRs synthesis by interacting with GhDIM and GhCYP90B, two BRs biosynthesis proteins. Additionally, GhCYP724B suppressed a unique chimeric open reading frame (Aorf27) in 2074A mitochondrial genome. Ectopic expression of Aorf27 in yeast inhibited cellular growth, and over expression of Aorf27 in tobacco showed male sterility. Overall, the results proved that the miR3367-lncRNA67-GhCYP724B module positively regulates male sterility by modulating BRs biosynthesis. The findings uncovered the function of lncRNA67-GhCYP724B in male sterility, providing a new mechanism for understanding male sterility in upland cotton.
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Affiliation(s)
- Anhui Guo
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Hushuai Nie
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Huijing Li
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Bin Li
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Cheng Cheng
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Kaiyun Jiang
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Shengwei Zhu
- Key Laboratory of Plant Molecular Physiology, Institute of BotanyChinese Academy of SciencesBeijing100093China
| | - Nan Zhao
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
| | - Jinping Hua
- Laboratory of Cotton Genetics, Genomics and Breeding/Joint Laboratory for International Cooperation in Crop Molecular Breeding, Ministry of Education/Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and BiotechnologyChina Agricultural UniversityBeijing100193China
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Luo J, Shao P, Sun Z, Li S, Cao D, Dong L, Wei J, Liu J. PdPLR1 effectively enhances resistance of Populus deltoides 'shalinyang' to Anoplophora glabripennis by positive regulation of lignan synthesis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 214:108944. [PMID: 39033651 DOI: 10.1016/j.plaphy.2024.108944] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 06/30/2024] [Accepted: 07/15/2024] [Indexed: 07/23/2024]
Abstract
Anoplophora glabripennis (ALB) is one of the most devastating wood boring insects of poplars. Populus deltoides 'Shalinyang (PdS), a new poplar variety, shows strong resistance to ALB infestation. However, the molecular mechanism of insect resistance in PdS is unclear. Here, we found that lignan content was much higher in PdS phloem after ALB infestation than in healthy trees, and that adding lignan to artificial diet significantly reduced: larval weight; digestive enzyme activity (cellulase [CL], polygalacturonase [PG]); detoxification enzyme activity (carboxylesterase [CarE], glutathione S-transferase [GSH-ST]); and defense enzyme activity (Catalase [CAT]). We further identified the lignan biosynthesis-related PdPLR1 gene (Pinoresinol-lariciresinol reductase, PLR) based on transcriptome analysis, and it was significantly up-regulated in the PdS phloem attacked by ALB. Overexpression of PdPLR1 in Arabidopsis increased th lignan content. In contrast, silencing PdPLR1 in PdS significantly decreased expression levels of PdPLR1 and lignan content by 82.45% and 56.85%. However, silencing PdPLR1 increased the number of adults ovipositions and eggs hatching. The activity of CL, PG, CarE, GSH-ST and CAT and the biomass of larvae fed on phloem of PdS with silenced PdPLR1 were significantly higher than in the control. Taken together, up regulation of PdPLR1 enhanced PdS resistance to ALB by regulating lignan synthesis. Our findings provide in-depth insights into the molecular mechanisms of PdS-ALB interactions, which lay the foundation for understanding of defense in poplars to pest infection.
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Affiliation(s)
- Jiayu Luo
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Pengpeng Shao
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Zuoxiang Sun
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Shuang Li
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Dandan Cao
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China; Hebei Innovation Center for Bioengineering and Biotechnology, Hebei University, Baoding, China
| | - Lijun Dong
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Jianrong Wei
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China; Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding, 071002, China.
| | - Jianfeng Liu
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China; Hebei Basic Science Center for Biotic Interaction, Hebei University, Baoding, 071002, China.
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Nybom H, Ruan C, Rumpunen K. The Systematics, Reproductive Biology, Biochemistry, and Breeding of Sea Buckthorn-A Review. Genes (Basel) 2023; 14:2120. [PMID: 38136942 PMCID: PMC10743242 DOI: 10.3390/genes14122120] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Revised: 11/11/2023] [Accepted: 11/15/2023] [Indexed: 12/24/2023] Open
Abstract
Both the fruit flesh and seeds of sea buckthorn have multiple uses for medicinal and culinary purposes, including the valuable market for supplementary health foods. Bioactive compounds, such as essential amino acids, vitamins B, C, and E, carotenoids, polyphenols, ursolic acid, unsaturated fatty acids, and other active substances, are now being analyzed in detail for their medicinal properties. Domestication with commercial orchards and processing plants is undertaken in many countries, but there is a large need for improved plant material with high yield, tolerance to environmental stress, diseases, and pests, suitability for efficient harvesting methods, and high contents of compounds that have medicinal and/or culinary values. Applied breeding is based mainly on directed crosses between different subspecies of Hippophae rhamnoides. DNA markers have been applied to analyses of systematics and population genetics as well as for the discrimination of cultivars, but very few DNA markers have as yet been developed for use in selection and breeding. Several key genes in important metabolic pathways have, however, been identified, and four genomes have recently been sequenced.
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Affiliation(s)
- Hilde Nybom
- Department of Plant Breeding–Balsgård, Swedish University of Agricultural Sciences, 29194 Kristianstad, Sweden
| | - Chengjiang Ruan
- Key Laboratory of Biotechnology and Bioresources Utilization, Ministry of Education, Institute of Plant Resources, Dalian Minzu University, Dalian 116600, China;
| | - Kimmo Rumpunen
- Department of Plant Breeding, Swedish University of Agricultural Sciences, 23053 Alnarp, Sweden;
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Zhao L, Cao D, Su Z, Fu X, Li Y, Wei J, Liu J. HrTPS12 gene dramatically enhanced insect resistance of sea buckthorn to infection by fruit fly (Rhagoletis batava obseuriosa Kol.). PEST MANAGEMENT SCIENCE 2023; 79:4172-4185. [PMID: 37318769 DOI: 10.1002/ps.7614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Revised: 05/09/2023] [Accepted: 06/15/2023] [Indexed: 06/16/2023]
Abstract
BACKGROUND Terpenoids emitted from plants are important for regulating plant-insect interaction. However, it is still unclear how terpenoids affect the host defense system. There are few reports of terpenoids' involvement in the mechanisms that regulate woody plants' insect resistance. RESULTS The (E)-β-ocimene of terpenes was only found in RBO-resist leaves, and its content was higher than that of other type terpenes. Further, we also found (E)-β-ocimene had a significant avoidance effect on RBO and reached 87.5% of the highest avoidance rate. Meanwhile, overexpression of HrTPS12 in Arabidopsis increased the HrTPS12 expression level, (E)-β-ocimene content, and enhanced the defense against RBO. However, silencing HrTPS12 in sea buckthorn revealed that the expression levels of HrTPS12 and (E)-β-ocimene significantly decreased, causing the attraction effect on RBO. CONCLUSION HrTPS12 was an up-regulator, which improves sea buckthorn resistance to RBO by regulating the synthesis of volatile (E)-β-ocimene. These results provide in-depth information about the interaction between RBO and sea buckthorn and provide a theoretical basis for developing plant-based insect repellents that can be used to manage RBO. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Lin Zhao
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Dandan Cao
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
- Hebei Innovation Center for Bioengineering and Biotechnology, Hebei University, Baoding, China
| | - Zhi Su
- Experimental Center of Desert Forest, Chinese Academy of Forestry, Denkou, China
| | - Xiaohong Fu
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Yanyan Li
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Jianrong Wei
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Jianfeng Liu
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, China
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Liu J, Feng R, Fu X, Zhao J, Zhang S, Wang J, Wang X, Wei J. Lignans dramatically enhance the resistance of Fraxinus velutina Torr. by adjusting the dominant bacterium group of Agrilus planipennis Fairmaire. PEST MANAGEMENT SCIENCE 2022; 78:1386-1397. [PMID: 34897966 DOI: 10.1002/ps.6755] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 12/07/2021] [Accepted: 12/12/2021] [Indexed: 06/14/2023]
Abstract
BACKGROUND Velvet ash (Fraxinus velutina Torr.) is an important wood and ornamental tree species. Emerald ash borer (EAB), Agrilus planipennis Fairmaire, is a major wood borer of velvet ash. The aim of this study was to identify the secondary metabolites of velvet ash involved in regulating the dominant bacterium group of EAB. RESULTS The amount of lignans in the phloem of infested trees had increased by 290.96% because of A. planipennis infection. The addition of lignans to the artificial diet significantly reduced the weight of the larvae and decreased the dominant bacterial group in the larval midgut, such as Pseudomonadaceae, Xanthomonadaceae, and Enterobacteriaceae. The FvPLR1, a key gene for lignan synthesis, was obtained based on the phloem transcriptome of velvet ash. The expression of FvPLR1 in the phloem of the infested tree was significantly higher than that in the noninfested tree. Meanwhile, FvPLR1 silenced by virus-induced gene silencing showed that its expression level and the lignan content were decreased by 69.91% and 31.65%, respectively. Interestingly, silencing FvPLR1 induced alterations in the dominant bacteria group in the larvae, with the reverse trend in the lignan-fed treatment. CONCLUSION The evidence showed that FvPLR1 was a positive regulator. The increasing synthesis of lignans leads to resistance improvement in velvet ash, which will provide comprehensive insights into the tree defense system to wood borer infestation. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Jianfeng Liu
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China
| | - Runxia Feng
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China
| | - Xiaohong Fu
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China
| | - Jie Zhao
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China
| | - Sufang Zhang
- Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Jianjun Wang
- Liaoning Academy of Forestry Science, Shenyang, China
| | - Xiaoyi Wang
- Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Jianrong Wei
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding, China
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Yao Y, Dong L, Fu X, Zhao L, Wei J, Cao J, Sun Y, Liu J. HrTCP20 dramatically enhance drought tolerance of sea buckthorn (Hippophae rhamnoides L). by mediating the JA signaling pathway. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 174:51-62. [PMID: 35144110 DOI: 10.1016/j.plaphy.2022.01.026] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 01/04/2022] [Accepted: 01/24/2022] [Indexed: 06/14/2023]
Abstract
Sea buckthorn, an important ecological and economical tree species, have remarkable drought and salt resistance. The plant-specific transcription factor TCPs play important roles in plant growth, development, and stress responses. However, in sea buckthorn, the molecular mechanism of TCP proteins and their involvement in drought stress are unknown. Here, we found that the expression of HrTCP20 was significantly up-regulated in sea buckthorn under drought stress. Overexpression of HrTCP20 in Arabidopsis thaliana showed that the superoxide dismutase (SOD), polyphenol oxidase (POD), and chlorophyll (SPAD) content was significantly increased by 1.37 and 1.35 times. However, the malondialdehyde (MDA) content decreased by 0.51 times. Our studies further confirmed that silencing HrTCP20 by virus-induced gene silencing (VIGS) led to a decrease in the content of defense enzymes, relative water content (RWC), and an increase of relative electrical conductivity (REC). Silencing HrTCP20 also caused the jasmonic acid (JA) content to decrease in the VIGS-treated tree. Interestingly, we found that JA accumulation content and the expression of HrLOX2, an essential enzyme for JA synthesis, was significantly inhibited in HrTCP20-silenced sea buckthorn under drought stress. Yeast two-hybrid analysis also showed that HrTCP20 is directly bound to HrLOX2. Taken together, the HrTCP20 transcription factor was a positive regulator in drought resistance of sea buckthorn. Further, our findings will provide comprehensive insights into the forest tree defence system of drought stress.
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Affiliation(s)
- Ying Yao
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Lijun Dong
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Xiaohong Fu
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Lin Zhao
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Jianrong Wei
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China
| | - Jinfeng Cao
- Hebei Key Laboratory of Crop Salt-Alkali Stress Tolerance Evaluation and Genetic Improvement, Cangzhou, China
| | - Yongyuan Sun
- Hebei Key Laboratory of Crop Salt-Alkali Stress Tolerance Evaluation and Genetic Improvement, Cangzhou, China.
| | - Jianfeng Liu
- College of Life Science, Institute of Life Science and Green Development, Hebei University, Baoding, China.
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Transcriptomic and metabolomic changes triggered by Macrosiphum rosivorum in rose (Rosa longicuspis). BMC Genomics 2021; 22:885. [PMID: 34886808 PMCID: PMC8656021 DOI: 10.1186/s12864-021-08198-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 11/23/2021] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Rose is one of the most popular flowers in the wold. Its field growth and quality are negatively affected by aphids. However, the defence mechanisms used by rose plants against aphids are unclear. Therefore, to understand the defence mechanism of rose under aphid stress, transcriptome and metabolome techniques were used to investigate the regulation mechanism in R. longicuspis infected with M. rosivorum. RESULT In our study, after inoculation with M. rosivorum, M. rosivorum quickly colonized R. longicuspis. A total of 34,202 genes and 758 metabolites were detected in all samples. Under M. rosivorum stress, R. longicuspis responded by MAPK cascades, plant hormone signal transduction pathway activation, RlMYBs and RlERFs transcription factors expression and ROS production. Interestingly, the 'brassinosteroid biosynthesis' pathway was significantly enriched in A3 d-vs.-A5 d. Further analysis showed that M. rosivorum induced the biosynthesis of secondary metabolites such as terpenoids, tannins and phenolic acids, among others. Importantly, the 'glutathione metabolic' and 'glucosinolate biosynthesis' pathways were significantly enriched, which involved in the rose against aphids. CONCLUSION Our study provides candidate genes and metabolites for Rosa defence against aphids. This study provides a theoretical basis for further exploring the molecular regulation mechanism of rose aphid resistance and aphid resistance breeding in the future.
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Liu G, Li H, Fu D. Applications of virus-induced gene silencing for identification of gene function in fruit. FOOD QUALITY AND SAFETY 2021. [DOI: 10.1093/fqsafe/fyab018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Abstract
With the development of bioinformatics, it is easy to obtain information and data about thousands of genes, but the determination of the functions of these genes depends on methods for rapid and effective functional identification. Virus-induced gene silencing (VIGS) is a mature method of gene functional identification developed over the last 20 years, which has been widely used in many research fields involving many species. Fruit quality formation is a complex biological process, which is closely related to ripening. Here, we review the progress and contribution of VIGS to our understanding of fruit biology and its advantages and disadvantages in determining gene function.
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