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Gao K, Chen Q, Pan B, Sun Y, Xu Y, Chen D, Liu H, Luo C, Chen X, Li H, Huang C. Current Achievements and Future Prospects in Virus Elimination Technology for Functional Chrysanthemum. Viruses 2023; 15:1770. [PMID: 37632112 PMCID: PMC10459880 DOI: 10.3390/v15081770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 08/14/2023] [Accepted: 08/16/2023] [Indexed: 08/27/2023] Open
Abstract
Chrysanthemum is an important functional plant that is used for food, medicine and tea. Functional chrysanthemums become infected with viruses all around the world, seriously lowering their quality and yield. Viral infection has become an important limiting factor in chrysanthemum production. Functional chrysanthemum is often propagated asexually by cutting during production, and viral infection of seedlings is becoming increasingly serious. Chrysanthemums can be infected by a variety of viruses causing different symptoms. With the development of biotechnology, virus detection and virus-free technologies for chrysanthemum seedlings are becoming increasingly effective. In this study, the common virus species, virus detection methods and virus-free technology of chrysanthemum infection are reviewed to provide a theoretical basis for virus prevention, treatment and elimination in functional chrysanthemum.
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Affiliation(s)
- Kang Gao
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
| | - Qingbing Chen
- College of Architecture, North China University of Water Resources and Electric Power, Zhengzhou 450046, China; (Q.C.); (B.P.); (Y.S.); (Y.X.)
| | - Bo Pan
- College of Architecture, North China University of Water Resources and Electric Power, Zhengzhou 450046, China; (Q.C.); (B.P.); (Y.S.); (Y.X.)
| | - Yahui Sun
- College of Architecture, North China University of Water Resources and Electric Power, Zhengzhou 450046, China; (Q.C.); (B.P.); (Y.S.); (Y.X.)
| | - Yuran Xu
- College of Architecture, North China University of Water Resources and Electric Power, Zhengzhou 450046, China; (Q.C.); (B.P.); (Y.S.); (Y.X.)
| | - Dongliang Chen
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
| | - Hua Liu
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
| | - Chang Luo
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
| | - Xi Chen
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
| | - Haiying Li
- College of Architecture, North China University of Water Resources and Electric Power, Zhengzhou 450046, China; (Q.C.); (B.P.); (Y.S.); (Y.X.)
| | - Conglin Huang
- Institute of Grassland, Flowers and Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China; (K.G.); (D.C.); (H.L.); (C.L.); (X.C.)
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Trolinger JC, McGovern RJ, Elmer WH, Rechcigl NA, Shoemaker CM. Diseases of Chrysanthemum. HANDBOOK OF PLANT DISEASE MANAGEMENT 2018. [DOI: 10.1007/978-3-319-39670-5_16] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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Suzuki R, Fukuta S, Matsumoto Y, Hasegawa T, Kojima H, Hotta M, Miyake N. Development of reverse transcription loop-mediated isothermal amplification assay as a simple detection method of Chrysanthemum stem necrosis virus in chrysanthemum and tomato. J Virol Methods 2016; 236:29-34. [PMID: 27400833 DOI: 10.1016/j.jviromet.2016.07.005] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2015] [Accepted: 07/07/2016] [Indexed: 11/16/2022]
Abstract
For a simple and rapid detection of Chrysanthemum stem necrosis virus (CSNV) from chrysanthemum and tomato, a reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed. A primer set designed to the genome sequences of CSNV worked most efficiently at 63°C and could detect CSNV RNA within 12min by fluorescence monitoring using an isothermal DNA amplification and fluorescence detection device. The result of a specificity test using seven other viruses and one viroid-infectable chrysanthemum or tomato showed that the assay could amplify CSNV specifically, and a sensitivity comparison showed that the RT-LAMP assay was as sensitive as the reverse transcriptase polymerase chain reaction. The RT-LAMP assay using crude RNA, extracted simply, could detect CSNV. Overall, the RT-LAMP assay was found to be a simple, specific, convenient, and time-saving method for CSNV detection.
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Affiliation(s)
- Ryoji Suzuki
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan.
| | - Shiro Fukuta
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan
| | - Yuho Matsumoto
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan
| | - Toru Hasegawa
- Higashi-mikawa Agricultural Institute, 11-48 Takayama, Toyohashi, Aichi 440-0833, Japan
| | - Hiroko Kojima
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan
| | - Makiko Hotta
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan
| | - Noriyuki Miyake
- Aichi Agricultural Research Center, 1-1 Sagamine, Nagakute, Aichi 480-1193, Japan
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Wu PR, Chien WC, Okuda M, Takeshita M, Yeh SD, Wang YC, Chen TC. Genetic and serological characterization of chrysanthemum stem necrosis virus, a member of the genus Tospovirus. Arch Virol 2015; 160:529-36. [PMID: 25427981 DOI: 10.1007/s00705-014-2287-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2014] [Accepted: 11/16/2014] [Indexed: 11/28/2022]
Abstract
Chrysanthemum stem necrosis virus (CSNV) is a member of a tentative tospovirus species. In this study, the complete genomic sequence of the Japanese CSNV isolate TcCh07A was determined. The L RNA is 8960 nt long and encodes the 331.0-kDa RNA-dependent RNA polymerase. The M RNA is 4828 nt long and encodes the 34.1-kDa movement protein (NSm) and the 127.7-kDa glycoprotein precursor (Gn/Gc). The S RNA is 2949 nt long and encodes the 52.4-kDa silencing suppressor protein (NSs) and the 29.3-kDa nucleocapsid (N) protein. The N protein of CSNV-TcCh07A was purified from virus-infected plant tissues and used for production of a rabbit polyclonal antiserum (RAs) and a monoclonal antibody (MAb). Results of serological tests by indirect ELISA and western blotting using the prepared RAs and MAb and a previously produced RAs against the N protein of tomato spotted wilt virus (TSWV) indicated that CSNV-TcCh07A, TSWV, tomato chlorotic spot virus, groundnut ringspot virus, alstroemeria necrotic streak virus and impatiens necrotic spot virus are serologically related.
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Affiliation(s)
- Pei-Ru Wu
- Department of Biotechnology, Asia University, Wufeng, Taichung, 41354, Taiwan
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Dullemans AM, Verhoeven JTJ, Kormelink R, van der Vlugt RAA. The complete nucleotide sequence of chrysanthemum stem necrosis virus. Arch Virol 2015; 160:605-8. [PMID: 25398595 DOI: 10.1007/s00705-014-2282-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2014] [Accepted: 11/05/2014] [Indexed: 10/24/2022]
Abstract
The complete genome sequence of chrysanthemum stem necrosis virus (CSNV) was determined using Roche 454 next-generation sequencing. CSNV is a tentative member of the genus Tospovirus within the family Bunyaviridae, whose members are arthropod-borne. This is the first report of the entire RNA genome sequence of a CSNV isolate. The large RNA of CSNV is 8955 nucleotides (nt) in size and contains a single open reading frame of 8625 nt in the antisense arrangement, coding for the putative RNA-dependent RNA polymerase (L protein) of 2874 aa with a predicted Mr of 331 kDa. Two untranslated regions of 397 and 33 nt are present at the 5' and 3' termini, respectively. The medium (M) and small (S) RNAs are 4830 and 2947 nt in size, respectively, and show 99 % identity to the corresponding genomic segments of previously partially characterized CSNV genomes. Protein sequences for the precursor of the Gn/Gc proteins, N and NSs, are identical in length in all of the analysed CSNV isolates.
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Affiliation(s)
- A M Dullemans
- Plant Research International, Wageningen University and Research Centre, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands,
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Song A, You Y, Chen F, Li P, Jiang J, Chen S. A multiplex RT-PCR for rapid and simultaneous detection of viruses and viroids in chrysanthemum. Lett Appl Microbiol 2012; 56:8-13. [DOI: 10.1111/lam.12007] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2012] [Revised: 09/22/2012] [Accepted: 09/22/2012] [Indexed: 11/26/2022]
Affiliation(s)
- A. Song
- College of Horticulture; Nanjing Agricultural University; Nanjing China
| | - Y. You
- College of Horticulture; Nanjing Agricultural University; Nanjing China
| | - F. Chen
- College of Horticulture; Nanjing Agricultural University; Nanjing China
| | - P. Li
- College of Horticulture; Nanjing Agricultural University; Nanjing China
| | - J. Jiang
- College of Horticulture; Nanjing Agricultural University; Nanjing China
| | - S. Chen
- College of Horticulture; Nanjing Agricultural University; Nanjing China
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Hallwass M, Leastro MO, Lima MF, Inoue-Nagata AK, Resende RO. Sequence determination and analysis of the NSs genes of two tospoviruses. Arch Virol 2011; 157:591-6. [PMID: 22187101 DOI: 10.1007/s00705-011-1196-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2011] [Accepted: 12/06/2011] [Indexed: 10/14/2022]
Abstract
The tospoviruses groundnut ringspot virus (GRSV) and zucchini lethal chlorosis virus (ZLCV) cause severe losses in many crops, especially in solanaceous and cucurbit species. In this study, the non-structural NSs gene and the 5'UTRs of these two biologically distinct tospoviruses were cloned and sequenced. The NSs sequence of GRSV and ZLCV were both 1,404 nucleotides long. Pairwise comparison showed that the NSs amino acid sequence of GRSV shared 69.6% identity with that of ZLCV and 75.9% identity with that of TSWV, while the NSs sequence of ZLCV and TSWV shared 67.9% identity. Phylogenetic analysis based on NSs sequences confirmed that these viruses cluster in the American clade.
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Affiliation(s)
- Mariana Hallwass
- Departamento de Biologia Celular, Universidade de Brasília, Brasilia, DF 70910-900, Brazil
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Pappu H, Jones R, Jain R. Global status of tospovirus epidemics in diverse cropping systems: Successes achieved and challenges ahead. Virus Res 2009; 141:219-36. [DOI: 10.1016/j.virusres.2009.01.009] [Citation(s) in RCA: 401] [Impact Index Per Article: 26.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/04/2009] [Indexed: 11/16/2022]
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