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Bossert S, Pauly A, Danforth BN, Orr MC, Murray EA. Lessons from assembling UCEs: A comparison of common methods and the case of Clavinomia (Halictidae). Mol Ecol Resour 2024; 24:e13925. [PMID: 38183389 DOI: 10.1111/1755-0998.13925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 12/08/2023] [Accepted: 12/21/2023] [Indexed: 01/08/2024]
Abstract
Sequence data assembly is a foundational step in high-throughput sequencing, with untold consequences for downstream analyses. Despite this, few studies have interrogated the many methods for assembling phylogenomic UCE data for their comparative efficacy, or for how outputs may be impacted. We study this by comparing the most commonly used assembly methods for UCEs in the under-studied bee lineage Nomiinae and a representative sampling of relatives. Data for 63 UCE-only and 75 mixed taxa were assembled with five methods, including ABySS, HybPiper, SPAdes, Trinity and Velvet, and then benchmarked for their relative performance in terms of locus capture parameters and phylogenetic reconstruction. Unexpectedly, Trinity and Velvet trailed the other methods in terms of locus capture and DNA matrix density, whereas SPAdes performed favourably in most assessed metrics. In comparison with SPAdes, the guided-assembly approach HybPiper generally recovered the highest quality loci but in lower numbers. Based on our results, we formally move Clavinomia to Dieunomiini and render Epinomia once more a subgenus of Dieunomia. We strongly advise that future studies more closely examine the influence of assembly approach on their results, or, minimally, use better-performing assembly methods such as SPAdes or HybPiper. In this way, we can move forward with phylogenomic studies in a more standardized, comparable manner.
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Affiliation(s)
- Silas Bossert
- Department of Entomology, Washington State University, Pullman, Washington, USA
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
| | - Alain Pauly
- Royal Belgian Institute of Natural Sciences, O.D. Taxonomy and Phylogeny, Brussels, Belgium
| | - Bryan N Danforth
- Department of Entomology, Cornell University, Ithaca, New York, USA
| | - Michael C Orr
- Entomologie, Staatliches Museum für Naturkunde Stuttgart, Stuttgart, Germany
| | - Elizabeth A Murray
- Department of Entomology, Washington State University, Pullman, Washington, USA
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2
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Robinson CRP, Dolezal AG, Newton ILG. Host species and geography impact bee-associated RNA virus communities with evidence for isolation by distance in viral populations. ISME COMMUNICATIONS 2024; 4:ycad003. [PMID: 38304079 PMCID: PMC10833078 DOI: 10.1093/ismeco/ycad003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 11/09/2023] [Accepted: 11/15/2023] [Indexed: 02/03/2024]
Abstract
Virus symbionts are important mediators of ecosystem function, yet we know little of their diversity and ecology in natural populations. The alarming decline of pollinating insects in many regions of the globe, especially the European honey bee, Apis mellifera, has been driven in part by worldwide transmission of virus pathogens. Previous work has examined the transmission of known honey bee virus pathogens to wild bee populations, but only a handful of studies have investigated the native viromes associated with wild bees, limiting epidemiological predictors associated with viral pathogenesis. Further, variation among different bee species might have important consequences in the acquisition and maintenance of bee-associated virome diversity. We utilized comparative metatranscriptomics to develop a baseline description of the RNA viromes associated with wild bee pollinators and to document viral diversity, community composition, and structure. Our sampling includes five wild-caught, native bee species that vary in social behavior as well as managed honey bees. We describe 26 putatively new RNA virus species based on RNA-dependent RNA polymerase phylogeny and show that each sampled bee species was associated with a specific virus community composition, even among sympatric populations of distinct host species. From 17 samples of a single host species, we recovered a single virus species despite over 600 km of distance between host populations and found strong evidence for isolation by distance in associated viral populations. Our work adds to the small number of studies examining viral prevalence and community composition in wild bees.
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Affiliation(s)
- Chris R P Robinson
- Department of Biology, Indiana University, Bloomington, IN 47405, United States
| | - Adam G Dolezal
- Department of Entomology, University of Illinois Urbana-Champaign, Urbana, IL 61801, United States
| | - Irene L G Newton
- Department of Biology, Indiana University, Bloomington, IN 47405, United States
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3
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Mee L, Barribeau SM. Influence of social lifestyles on host-microbe symbioses in the bees. Ecol Evol 2023; 13:e10679. [PMID: 37928198 PMCID: PMC10620586 DOI: 10.1002/ece3.10679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 10/16/2023] [Accepted: 10/17/2023] [Indexed: 11/07/2023] Open
Abstract
Microbiomes are increasingly recognised as critical for the health of an organism. In eusocial insect societies, frequent social interactions allow for high-fidelity transmission of microbes across generations, leading to closer host-microbe coevolution. The microbial communities of bees with other social lifestyles are less studied, and few comparisons have been made between taxa that vary in social structure. To address this gap, we leveraged a cloud-computing resource and publicly available transcriptomic data to conduct a survey of microbial diversity in bee samples from a variety of social lifestyles and taxa. We consistently recover the core microbes of well-studied corbiculate bees, supporting this method's ability to accurately characterise microbial communities. We find that the bacterial communities of bees are influenced by host location, phylogeny and social lifestyle, although no clear effect was found for fungal or viral microbial communities. Bee genera with more complex societies tend to harbour more diverse microbes, with Wolbachia detected more commonly in solitary tribes. We present a description of the microbiota of Euglossine bees and find that they do not share the "corbiculate core" microbiome. Notably, we find that bacteria with known anti-pathogenic properties are present across social bee genera, suggesting that symbioses that enhance host immunity are important with higher sociality. Our approach provides an inexpensive means of exploring microbiomes of a given taxa and identifying avenues for further research. These findings contribute to our understanding of the relationships between bees and their associated microbial communities, highlighting the importance of considering microbiome dynamics in investigations of bee health.
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Affiliation(s)
- Lauren Mee
- Institute of Infection, Veterinary and Ecological Sciences, Department of Evolution, Ecology and BehaviourUniversity of LiverpoolLiverpoolUK
| | - Seth M. Barribeau
- Institute of Infection, Veterinary and Ecological Sciences, Department of Evolution, Ecology and BehaviourUniversity of LiverpoolLiverpoolUK
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4
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Lovegrove MR, Dearden PK, Duncan EJ. Honeybee queen mandibular pheromone induces a starvation response in Drosophila melanogaster. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2023; 154:103908. [PMID: 36657589 DOI: 10.1016/j.ibmb.2023.103908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Revised: 12/27/2022] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
Eusocial insect societies are defined by the reproductive division of labour, a social structure that is generally enforced by the reproductive dominant(s) or 'queen(s)'. Reproductive dominance is maintained through behavioural dominance or production of queen pheromones, or a mixture of both. Queen mandibular pheromone (QMP) is a queen pheromone produced by queen honeybees (Apis mellifera) which represses reproduction in worker honeybees. How QMP acts to repress worker reproduction, the mechanisms by which this repression is induced, and how it has evolved this activity, remain poorly understood. Surprisingly, QMP is capable of repressing reproduction in non-target arthropods. Here we show that in Drosophila melanogaster QMP treatment mimics the starvation response, disrupting reproduction. QMP exposure induces an increase in food consumption and activation of checkpoints in the ovary that reduce fecundity and depresses insulin signalling. The magnitude of these effects is indistinguishable between QMP-treated and starved individuals. As QMP triggers a starvation response in an insect diverged from honeybees, we propose that QMP originally evolved by co-opting nutrition signalling pathways to regulate reproduction.
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Affiliation(s)
- Mackenzie R Lovegrove
- Genomics Aotearoa and Biochemistry Department, University of Otago, P.O. Box 56, Dunedin, Aotearoa, New Zealand; School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK
| | - Peter K Dearden
- Genomics Aotearoa and Biochemistry Department, University of Otago, P.O. Box 56, Dunedin, Aotearoa, New Zealand.
| | - Elizabeth J Duncan
- School of Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.
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5
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González-Vaquero RA. Solitary and semisocial behaviour in the Corynura group: new findings in a clade sister to all other Augochlorini bees (Hymenoptera: Halictidae). J NAT HIST 2022. [DOI: 10.1080/00222933.2022.2134833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Affiliation(s)
- Rocío Ana González-Vaquero
- Facultad de Agronomía, Universidad de Buenos Aires, Buenos Aires, Argentina
- División Entomología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” – CONICET, Buenos Aires, Argentina
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6
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Baudier KM, Ostwald MM, Haney BR, Calixto JM, Cossio FJ, Fewell JH. Social Factors in Heat Survival: Multiqueen Desert Ant Colonies Have Higher and More Uniform Heat Tolerance. Physiol Biochem Zool 2022; 95:379-389. [PMID: 35914287 DOI: 10.1086/721251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractInvestigations of thermally adaptive behavioral phenotypes are critical for both understanding climate as a selective force and predicting global species distributions under climate change conditions. Cooperative nest founding is a common strategy in harsh environments for many species and can enhance growth and competitive advantage, but whether this social strategy has direct effects on thermal tolerance was previously unknown. We examined the effects of alternative social strategies on thermal tolerance in a facultatively polygynous (multiqueen) desert ant, Pogonomyrmex californicus, asking whether and how queen number affects worker thermal tolerances. We established and reared lab colonies with one to four queens, then quantified all colony member heat tolerances (maximum critical temperature [CTmax]). Workers from colonies with more queens had higher and less variant CTmax. Our findings resemble weak link patterns, in which colony group thermal performance is improved by reducing frequencies of the most temperature-vulnerable individuals. Using ambient temperatures from our collection site, we show that multiqueen colonies have thermal tolerance distributions that enable increased midday foraging in hot desert environments. Our results suggest advantages to polygyny under climate change scenarios and raise the question of whether improved thermal tolerance is a factor that has enabled the success of polygyne species in other climatically extreme environments.
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Ostwald MM, Haney BR, Fewell JH. Ecological Drivers of Non-kin Cooperation in the Hymenoptera. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.768392] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Despite the prominence of kin selection as a framework for understanding the evolution of sociality, many animal groups are comprised of unrelated individuals. These non-kin systems provide valuable models that can illuminate drivers of social evolution beyond indirect fitness benefits. Within the Hymenoptera, whose highly related eusocial groups have long been cornerstones of kin selection theory, groups may form even when indirect fitness benefits for helpers are low or absent. These non-kin groups are widespread and abundant, yet have received relatively little attention. We review the diversity and organization of non-kin sociality across the Hymenoptera, particularly among the communal bees and polygynous ants and wasps. Further, we discuss common drivers of sociality across these groups, with a particular focus on ecological factors. Ecological contexts that favor non-kin sociality include those dominated by resource scarcity or competition, climatic stressors, predation and parasitism, and/or physiological constraints associated with reproduction and resource exploitation. Finally, we situate Hymenopteran non-kin sociality within a broader biological context by extending insights from these systems across diverse taxa, especially the social vertebrates. Non-kin social groups thus provide unique demonstrations of the importance of ecological factors in mediating the evolutionary transition from solitary to group living.
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Abstract
Although indirect selection through relatives (kin selection) can explain the evolution of effectively sterile offspring that act as helpers at the nest (eusociality) in the ants, bees, and stinging wasps (aculeate Hymenoptera), the genetic, ecological, and life history conditions that favor transitions to eusociality are poorly understood. In this study, ancestral state reconstruction on recently published phylogenies was used to identify the independent transitions to eusociality in each of the taxonomic families that exhibit eusociality. Semisociality, in which a single nest co-foundress monopolizes reproduction, often precedes eusociality outside the vespid wasps. Such a route to eusociality, which is consistent with groups consisting of a mother and her daughters (subsocial) at some stage and ancestral monogamy, is favored by the haplodiploid genetic sex determination of the Hymenoptera (diploid females and haploid males) and thus may explain why eusociality is common in the Hymenoptera. Ancestral states were also reconstructed for life history characters that have been implicated in the origins of eusociality. A loss of larval diapause during unfavorable seasons or conditions precedes, or coincides with, all but one transition to eusociality. This pattern is confirmed using phylogenetic tests of associations between state transition rates for sweat bees and apid bees. A loss of larval diapause may simply reflect the subsocial route to eusociality since subsociality is defined as females interacting with their adult daughters. A loss of larval diapause and a gain of subsociality may be associated with an extended breeding season that permits the production of at least two broods, which is necessary for helpers to evolve. Adult diapause may also lower the selective barrier to a first-brood daughter becoming a helper. Obligate eusociality meets the definition of a major evolutionary transition, and such transitions have occurred five times in the Hymenoptera.
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Glaum P, Wood TJ, Morris JR, Valdovinos FS. Phenology and flowering overlap drive specialisation in plant-pollinator networks. Ecol Lett 2021; 24:2648-2659. [PMID: 34532944 DOI: 10.1111/ele.13884] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 08/05/2021] [Accepted: 08/21/2021] [Indexed: 11/30/2022]
Abstract
Variation in dietary specialisation stems from fundamental interactions between species and their environment. Consequently, understanding the drivers of this variation is key to understanding ecological and evolutionary processes. Dietary specialisation in wild bees has received attention due to their close mutualistic dependence on plants, and because both groups are threatened by biodiversity loss. Many principles governing pollinator specialisation have been identified, but they remain largely unvalidated. Organismal phenology has the potential to structure realised specialisation by determining concurrent resource availability and pollinator foraging activity. We evaluate this principle using mechanistic models of adaptive foraging in pollinators within plant-pollinator networks. While temporal resource overlap has little impact on specialisation in pollinators with extended flight periods, reduced overlap increases specialisation as pollinator flight periods decrease. These results are corroborated empirically using pollen load data taken from bees with shorter and longer flight periods across environments with high and low temporal resource overlap.
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Affiliation(s)
- Paul Glaum
- Department of Environmental Science and Policy, University of California-Davis, Davis, California, USA.,Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
| | - Thomas J Wood
- Laboratory of Zoology, University of Mons, Mons, Belgium
| | - Jonathan R Morris
- School for Environment and Sustainability, University of Michigan, Ann Arbor, Michigan, USA
| | - Fernanda S Valdovinos
- Department of Environmental Science and Policy, University of California-Davis, Davis, California, USA.,Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
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10
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Steitz I, Paxton RJ, Schulz S, Ayasse M. Chemical Variation among Castes, Female Life Stages and Populations of the Facultative Eusocial Sweat Bee Halictus rubicundus (Hymenoptera: Halictidae). J Chem Ecol 2021; 47:406-419. [PMID: 33788128 PMCID: PMC8116247 DOI: 10.1007/s10886-021-01267-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Revised: 03/05/2021] [Accepted: 03/17/2021] [Indexed: 11/28/2022]
Abstract
In eusocial insects, chemical communication is crucial for mediating many aspects of social activities, especially the regulation of reproduction. Though queen signals are known to decrease ovarian activation of workers in highly eusocial species, little is known about their evolution. In contrast, some primitively eusocial species are thought to control worker reproduction through physical aggression by the queen rather than via pheromones, suggesting the evolutionary establishment of chemical signals with more derived sociality. However, studies supporting this hypothesis are largely missing. Socially polymorphic halictid bees, such as Halictus rubicundus, with social and solitary populations in both Europe and North America, offer excellent opportunities to illuminate the evolution of caste-specific signals. Here we compared the chemical profiles of social and solitary populations from both continents and tested whether (i) population or social level affect chemical dissimilarity and whether (ii) caste-specific patterns reflect a conserved queen signal. Our results demonstrate unique odor profiles of European and North American populations, mainly due to different isomers of n-alkenes and macrocyclic lactones; chemical differences may be indicative of phylogeographic drift in odor profiles. We also found common compounds overproduced in queens compared to workers in both populations, indicating a potential conserved queen signal. However, North American populations have a lower caste-specific chemical dissimilarity than European populations which raises the question if both use different mechanisms of regulating reproductive division of labor. Therefore, our study gives new insights into the evolution of eusocial behavior and the role of chemical communication in the inhibition of reproduction.
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Affiliation(s)
- Iris Steitz
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany.
| | - Robert J Paxton
- General Zoology, Institute for Biology, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Stefan Schulz
- Departement of Life Sciences, Institute of Organic Chemistry, TU Braunschweig, Braunschweig, Germany
| | - Manfred Ayasse
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
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Hagadorn MA, Johnson MM, Smith AR, Seid MA, Kapheim KM. Experience, but not age, is associated with volumetric mushroom body expansion in solitary alkali bees. J Exp Biol 2021; 224:jeb.238899. [DOI: 10.1242/jeb.238899] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Accepted: 02/09/2021] [Indexed: 01/03/2023]
Abstract
ABSTRACT
In social insects, changes in behavior are often accompanied by structural changes in the brain. This neuroplasticity may come with experience (experience-dependent) or age (experience-expectant). Yet, the evolutionary relationship between neuroplasticity and sociality is unclear, because we know little about neuroplasticity in the solitary relatives of social species. We used confocal microscopy to measure brain changes in response to age and experience in a solitary halictid bee (Nomia melanderi). First, we compared the volume of individual brain regions among newly emerged females, laboratory females deprived of reproductive and foraging experience, and free-flying, nesting females. Experience, but not age, led to significant expansion of the mushroom bodies – higher-order processing centers associated with learning and memory. Next, we investigated how social experience influences neuroplasticity by comparing the brains of females kept in the laboratory either alone or paired with another female. Paired females had significantly larger olfactory regions of the mushroom bodies. Together, these experimental results indicate that experience-dependent neuroplasticity is common to both solitary and social taxa, whereas experience-expectant neuroplasticity may be an adaptation to life in a social colony. Further, neuroplasticity in response to social chemical signals may have facilitated the evolution of sociality.
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Affiliation(s)
- Mallory A. Hagadorn
- Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA
| | - Makenna M. Johnson
- Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA
| | - Adam R. Smith
- Department of Biological Sciences, George Washington University, 800 22nd St NW, Washington, DC 20052, USA
| | - Marc A. Seid
- Biology Department, University of Scranton, 800 Linden St, Scranton, PA 18510, USA
| | - Karen M. Kapheim
- Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA
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12
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Kingwell C, Böröczky K, Steitz I, Ayasse M, Wcislo W. Cuticular and Dufour's Gland Chemistry Reflect Reproductive and Social State in the Facultatively Eusocial Sweat Bee Megalopta genalis (Hymenoptera: Halictidae). J Chem Ecol 2021; 47:420-432. [PMID: 33682070 DOI: 10.1007/s10886-021-01262-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Revised: 02/23/2021] [Accepted: 03/02/2021] [Indexed: 01/18/2023]
Abstract
Queen pheromones evolved independently in multiple eusocial insect lineages, in which they mediate reproductive conflict by inhibiting worker ovarian development. Although fundamentally important for reproductive division of labor - the hallmark of eusociality - their evolutionary origins are enigmatic. Here, we analyze cuticular and Dufour's gland chemistries across alternative social and reproductive phenotypes in Megalopta genalis bees (tribe Augochlorini, family Halictidae) that facultatively express simple eusociality. Reproductive bees have distinct overall glandular and cuticular chemical phenotypes compared with non-reproductive workers. On the cuticle, a likely site of signal transmission, reproductives are enriched for certain alkenes, most linear alkanes, and are heavily enriched for all methyl-branched alkanes. Chemicals belonging to these compound classes are known to function as fertility signals in other eusocial insect taxa. Some macrocyclic lactones, compounds that serve as queen pheromones in the other eusocial halictid tribe (Halictini), are also enriched among reproductives relative to workers. The intra-population facultative eusociality of M. genalis permits direct comparisons between individuals expressing alternative reproductive phenotypes - females that reproduce alone (solitary reproductives) and social queens - to highlight traits in the latter that may be important mediators of eusociality. Compared with solitary reproductives, the cuticular chemistries of queens are more strongly differentiated from those of workers, and furthermore are especially enriched for methyl-branched alkanes. Determining the pheromonal function(s) and information content of the candidate signaling compounds we identify will help illuminate the early evolutionary history of queen pheromones, chemical signals central to the organization of insect eusocial behavior.
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Affiliation(s)
- Callum Kingwell
- Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, USA.
- Smithsonian Tropical Research Institute, Panama City, Panama.
| | - Katalin Böröczky
- Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, USA
| | - Iris Steitz
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - Manfred Ayasse
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - William Wcislo
- Smithsonian Tropical Research Institute, Panama City, Panama
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13
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Abstract
Abstract
In eusocial Hymenoptera, queens and their helper offspring should favour different sex investment ratios. Queens should prefer a 1:1 investment ratio, as they are equally related to offspring of both sexes (r = 0.5). In contrast, helpers should favour an investment ratio of 3:1 towards the production of female brood. This conflict arises because helpers are more closely related to full sisters (r = 0.75) than brothers (r = 0.25). However, helpers should invest relatively more in male brood if relatedness asymmetry within their colony is reduced. This can occur due to queen replacement after colony orphaning, multiple paternity and the presence of unrelated alien helpers. We analysed an unprecedentedly large number of colonies (n = 109) from a UK population of Lasioglossum malachurum, an obligate eusocial sweat bee, to tease apart the effects of these factors on colony-level investment ratios. We found that multiple paternity, unrelated alien helpers and colony orphaning were all common. Queen-right colonies invested relatively more in females than did orphaned colonies, producing a split sex ratio. However, investment ratios did not change due to multiple paternity or the presence of alien helpers, reducing inclusive fitness pay-offs for helpers. Queen control may also have been important: helpers rarely laid male eggs, and investment in female brood was lower when queens were large relative to their helpers. Genetic relatedness between helpers and the brood that they rear was 0.43 in one year and 0.37 in another year, suggesting that ecological benefits, as well as relatedness benefits, are necessary for the maintenance of helping behaviour.
Significance statement
How helping behaviour is maintained in eusocial species is a key topic in evolutionary biology. Colony-level sex investment ratio changes in response to relatedness asymmetries can dramatically influence inclusive fitness benefits for helpers in eusocial Hymenoptera. The extent to which helpers in primitively eusocial colonies can respond adaptively to different sources of variation in relatedness asymmetry is unclear. Using data from 109 colonies of the sweat bee Lasioglossum malachurum, we found that queen loss, but not multiple paternity or the presence of alien helpers, was correlated with colony sex investment ratios. Moreover, we quantified average helper-brood genetic relatedness to test whether it is higher than that predicted under solitary reproduction (r = 0.5). Values equal to and below r = 0.5 suggest that relatedness benefits alone cannot explain the maintenance of helping behaviour. Ecological benefits of group living and/or coercion must also contribute.
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The Myth of a Previous Asocial State: some Criticisms and Reflections. Integr Psychol Behav Sci 2020; 55:250-266. [PMID: 32748180 DOI: 10.1007/s12124-020-09571-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
The question about the origin of social behavior from the evolutionary perspective can be traced back to Darwin. However, the advance of research and discoveries made especially in the first half of the past century, as well as the theoretical positions disseminated by some of the representatives of the so-called «Neo-Darwinist» epistemological position, led to the inquiry about reciprocity and cooperation towards the complex necessity to validate the existence of cooperation and reciprocity. This document offers a critical review of the main assumptions that demonstrate how it is that one of its basic assumptions, that of the existence of an asocial state prior to cooperation and reciprocity can be the cause of the difficulties involved in the explanation of the evolutionary origin of the social behavior.
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15
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Developmental plasticity shapes social traits and selection in a facultatively eusocial bee. Proc Natl Acad Sci U S A 2020; 117:13615-13625. [PMID: 32471944 PMCID: PMC7306772 DOI: 10.1073/pnas.2000344117] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Developmental processes are an important source of phenotypic variation, but the extent to which this variation contributes to evolutionary change is unknown. We used integrative genomic analyses to explore the relationship between developmental and social plasticity in a bee species that can adopt either a social or solitary lifestyle. We find genes regulating this social flexibility also regulate development, and positive selection on these genes is influenced by their function during development. This suggests that developmental plasticity may influence the evolution of sociality. Our additional finding of genetic variants linked to differences in social behavior sheds light on how phenotypic variation derived from development may become encoded into the genome, and thus contribute to evolutionary change. Developmental plasticity generates phenotypic variation, but how it contributes to evolutionary change is unclear. Phenotypes of individuals in caste-based (eusocial) societies are particularly sensitive to developmental processes, and the evolutionary origins of eusociality may be rooted in developmental plasticity of ancestral forms. We used an integrative genomics approach to evaluate the relationships among developmental plasticity, molecular evolution, and social behavior in a bee species (Megalopta genalis) that expresses flexible sociality, and thus provides a window into the factors that may have been important at the evolutionary origins of eusociality. We find that differences in social behavior are derived from genes that also regulate sex differentiation and metamorphosis. Positive selection on social traits is influenced by the function of these genes in development. We further identify evidence that social polyphenisms may become encoded in the genome via genetic changes in regulatory regions, specifically in transcription factor binding sites. Taken together, our results provide evidence that developmental plasticity provides the substrate for evolutionary novelty and shapes the selective landscape for molecular evolution in a major evolutionary innovation: Eusociality.
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16
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Ferrari RR, Onuferko TM, Monckton SK, Packer L. The evolutionary history of the cellophane bee genus Colletes Latreille (Hymenoptera: Colletidae): Molecular phylogeny, biogeography and implications for a global infrageneric classification. Mol Phylogenet Evol 2020; 146:106750. [PMID: 32028034 DOI: 10.1016/j.ympev.2020.106750] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2019] [Revised: 01/27/2020] [Accepted: 01/28/2020] [Indexed: 12/21/2022]
Abstract
Colletes Latreille (Hymenoptera: Colletidae) is a diverse genus with 518 valid species distributed in all biogeographic realms, except Australasia and Antarctica. Here we provide a comprehensive dated phylogeny for Colletes based on Bayesian and maximum likelihood-based analyses of DNA sequence data of six loci: 28S rDNA, cytochrome c oxidase subunit 1, elongation factor-1α copy F2, long-wavelength rhodopsin, RNA polymerase II and wingless. In total, our multilocus matrix consists of 4824 aligned base pairs for 143 species, including 112 Colletes species plus 31 outgroups (one stenotritid and a diverse array of colletids representing all subfamilies). Overall, analyses of each of the six single-locus datasets resulted in poorly resolved consensus trees with conflicting phylogenetic signal. However, our analyses of the multilocus matrix provided strong support for the monophyly of Colletes and show that it can be subdivided into five major clades. The implications of our phylogenetic results for future attempts at infrageneric classification for the Colletes of the world are discussed. We propose species groups for the Neotropical species of Colletes, the only major biogeographic realm for which no species groups have been proposed to date. Our dating analysis indicated that Colletes diverged from its sister taxon, Hemicotelles Toro and Cabezas, in the early Oligocene and that its extant lineages began diversifying only in the late Oligocene. According to our biogeographic reconstruction, Colletes originated in the Neotropics (most likely within South America) and then spread to the Nearctic very early in its evolutionary history. Geodispersal to the Old World occurred soon after colonization of the Northern Hemisphere. Lastly, the historical biogeography of Colletes is analyzed in light of available geological and palaeoenvironmental data.
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Affiliation(s)
- Rafael R Ferrari
- Department of Biology, Faculty of Science, York University, 4700 Keele St., Toronto, ON M3J 1P3, Canada.
| | - Thomas M Onuferko
- Department of Biology, Faculty of Science, York University, 4700 Keele St., Toronto, ON M3J 1P3, Canada; The Beaty Centre for Species Discovery, Canadian Museum of Nature, Ottawa, ON K1P 6P4, Canada
| | - Spencer K Monckton
- Department of Biology, Faculty of Science, York University, 4700 Keele St., Toronto, ON M3J 1P3, Canada
| | - Laurence Packer
- Department of Biology, Faculty of Science, York University, 4700 Keele St., Toronto, ON M3J 1P3, Canada
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17
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The effects of urbanization on bee communities depends on floral resource availability and bee functional traits. PLoS One 2019; 14:e0225852. [PMID: 31790482 PMCID: PMC6886752 DOI: 10.1371/journal.pone.0225852] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2019] [Accepted: 11/13/2019] [Indexed: 11/24/2022] Open
Abstract
Wild bees are important pollinators in many ecosystems threatened by anthropogenic disturbance. Urban development can reduce and degrade natural habitat for bees and other pollinators. However, some researchers suggest that cities could also provide refuge for bees, given that agricultural intensification may pose a greater risk. In this study, we surveyed bee communities at 15 farms and gardens across an urban-rural gradient in southeastern Michigan, USA to evaluate the effect of urbanization on bees. We examined how floral resources, bee functional traits, temperature, farm size, and the spatial scale of analysis influence bee response to urbanization. We found that urbanization positively affected bee diversity and evenness but had no effect on total abundance or species richness. Additionally, urbanization altered bee community composition via differential effects on bee species and functional groups. More urbanized sites supported a greater number of exotic, above-ground nesting, and solitary bees, but fewer eusocial bees. Blooming plant species richness positively influenced bee species diversity and richness. Furthermore, the amount of available floral resources was positively associated with exotic and eusocial bee abundances. Across sites, nearly 70% of floral resources were provided by exotic plants, most of which are characterized as weedy but not invasive. Our study demonstrates that urbanization can benefit some bee species and negatively impact others. Notably, Bombus and Lasioglossum (Dialictus), were two important pollinator groups negatively affected by urbanization. Our study supports the idea that urban environments can provide valuable habitat for diverse bee communities, but demonstrates that some bees are vulnerable to urbanization. Finally, while our results indicate that increasing the abundance and richness of floral resources could partially compensate for negative effects of urbanization on bees, the effectiveness of such measures may be limited by other factors, such as urban warming.
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Santos PKF, Arias MC, Kapheim KM. Loss of developmental diapause as prerequisite for social evolution in bees. Biol Lett 2019; 15:20190398. [PMID: 31409242 PMCID: PMC6731480 DOI: 10.1098/rsbl.2019.0398] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Diapause is a physiological arrest of development ahead of adverse environmental conditions and is a critical phase of the life cycle of many insects. In bees, diapause has been reported in species from all seven taxonomic families. However, they exhibit a variety of diapause strategies. These different strategies are of particular interest since shifts in the phase of the insect life cycle in which diapause occurs have been hypothesized to promote the evolution of sociality. Here we provide a comprehensive evaluation of this hypothesis with phylogenetic analysis and ancestral state reconstruction (ASR) of the ecological and evolutionary factors associated with diapause phase. We find that social lifestyle, latitude and voltinism are significant predictors of the life stage in which diapause occurs. ASR revealed that the most recent common ancestor of all bees likely exhibited developmental diapause and shifts to adult, reproductive, or no diapause have occurred in the ancestors of lineages in which social behaviour has evolved. These results provide fresh insight regarding the role of diapause as a prerequisite for the evolution of sociality in bees.
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Affiliation(s)
- Priscila Karla Ferreira Santos
- Departamento de Genética e Biologia Evolutiva, Instituto de Biociências - Universidade de São Paulo, Rua do Matão, 277, CEP 05508-090 São Paulo, SP, Brazil
| | - Maria Cristina Arias
- Departamento de Genética e Biologia Evolutiva, Instituto de Biociências - Universidade de São Paulo, Rua do Matão, 277, CEP 05508-090 São Paulo, SP, Brazil
| | - Karen M Kapheim
- Department of Biology, Utah State University, Logan, UT 84322, USA
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19
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Linksvayer TA, Johnson BR. Re-thinking the social ladder approach for elucidating the evolution and molecular basis of insect societies. CURRENT OPINION IN INSECT SCIENCE 2019; 34:123-129. [PMID: 31401545 DOI: 10.1016/j.cois.2019.07.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Revised: 06/21/2019] [Accepted: 07/03/2019] [Indexed: 06/10/2023]
Abstract
The evolution of large insect societies is a major evolutionary transition that occurred in the long-extinct ancestors of termites, ants, corbiculate bees, and vespid wasps. Researchers have long used 'social ladder thinking': assuming progressive stepwise phenotypic evolution and asserting that extant species with simple societies (e.g. some halictid bees) represent the ancestors of species with complex societies, and thus provide insight into general early steps of eusocial evolution. We discuss how this is inconsistent with data and modern evolutionary 'tree thinking'. Phylogenetic comparative methods with broad sampling provide the best means to make rigorous inferences about ancestral traits and evolutionary transitions that occurred within each lineage, and to determine whether consistent phenotypic and genomic changes occurred across independent lineages.
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Affiliation(s)
| | - Brian R Johnson
- Department of Entomology and Nematology, University of California Davis, United States
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20
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Saleh NW, Ramírez SR. Sociality emerges from solitary behaviours and reproductive plasticity in the orchid bee Euglossa dilemma. Proc Biol Sci 2019; 286:20190588. [PMID: 31288697 DOI: 10.1098/rspb.2019.0588] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
The evolution of eusociality and sterile worker castes represents a major transition in the history of life. Despite this, little is known about the mechanisms involved in the initial transition from solitary to social behaviour. It has been hypothesized that plasticity from ancestral solitary life cycles was coopted to create queen and worker castes in insect societies. Here, we tested this hypothesis by examining gene expression involved in the transition from solitary to social behaviour in the orchid bee Euglossa dilemma. To this end, we conducted observations that allowed us to classify bees into four distinct categories of solitary and social behaviour. Then, by sequencing brain and ovary transcriptomes from these behavioural phases, we identified gene expression changes overlapping with socially associated genes across multiple eusocial lineages. We find that genes involved in solitary E. dilemma ovarian plasticity overlap extensively with genes showing differential expression between fertile and sterile workers-or between queens and workers in other eusocial bees. We also find evidence that sociality in E. dilemma reflects gene expression patterns involved in solitary foraging and non-foraging nest care behaviours. Our results provide strong support for the hypothesis that eusociality emerges from plasticity found across solitary life cycles.
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Affiliation(s)
- Nicholas W Saleh
- Center for Population Biology, University of California , Davis, CA , USA
| | - Santiago R Ramírez
- Center for Population Biology, University of California , Davis, CA , USA
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21
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Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi). G3-GENES GENOMES GENETICS 2019; 9:625-634. [PMID: 30642875 PMCID: PMC6404593 DOI: 10.1534/g3.118.200865] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Alkali bees (Nomia melanderi) are solitary relatives of the halictine bees, which have become an important model for the evolution of social behavior, but for which few solitary comparisons exist. These ground-nesting bees defend their developing offspring against pathogens and predators, and thus exhibit some of the key traits that preceded insect sociality. Alkali bees are also efficient native pollinators of alfalfa seed, which is a crop of major economic value in the United States. We sequenced, assembled, and annotated a high-quality draft genome of 299.6 Mbp for this species. Repetitive content makes up more than one-third of this genome, and previously uncharacterized transposable elements are the most abundant type of repetitive DNA. We predicted 10,847 protein coding genes, and identify 479 of these undergoing positive directional selection with the use of population genetic analysis based on low-coverage whole genome sequencing of 19 individuals. We found evidence of recent population bottlenecks, but no significant evidence of population structure. We also identify 45 genes enriched for protein translation and folding, transcriptional regulation, and triglyceride metabolism evolving slower in alkali bees compared to other halictid bees. These resources will be useful for future studies of bee comparative genomics and pollinator health research.
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22
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Jones BM, Robinson GE. Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality. J Exp Biol 2018; 221:jeb153163. [PMID: 30478152 PMCID: PMC6288071 DOI: 10.1242/jeb.153163] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
For over a century, biologists have proposed a role for phenotypic plasticity in evolution, providing an avenue for adaptation in addition to 'mutation-first' models of evolutionary change. According to the various versions of this idea, the ability of organisms to respond adaptively to their environment through phenotypic plasticity may lead to novel phenotypes that can be screened by natural selection. If these initially environmentally induced phenotypes increase fitness, then genetic accommodation can lead to allele frequency change, influencing the expression of those phenotypes. Despite the long history of 'plasticity-first' models, the importance of genetic accommodation in shaping evolutionary change has remained controversial - it is neither fully embraced nor completely discarded by most evolutionary biologists. We suggest that the lack of acceptance of genetic accommodation in some cases is related to a lack of information on its molecular mechanisms. However, recent reports of epigenetic transgenerational inheritance now provide a plausible mechanism through which genetic accommodation may act, and we review this research here. We also discuss current evidence supporting a role for genetic accommodation in the evolution of eusociality in social insects, which have long been models for studying the influence of the environment on phenotypic variation, and may be particularly good models for testing hypotheses related to genetic accommodation. Finally, we introduce 'eusocial engineering', a method by which novel social phenotypes are first induced by environmental modification and then studied mechanistically to understand how environmentally induced plasticity may lead to heritable changes in social behavior. We believe the time is right to incorporate genetic accommodation into models of the evolution of complex traits, armed with new molecular tools and a better understanding of non-genetic heritable elements.
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Affiliation(s)
- Beryl M Jones
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - Gene E Robinson
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Department of Entomology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
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23
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Sutherland TD, Sriskantha A, Rapson TD, Kaehler BD, Huttley GA. Did aculeate silk evolve as an antifouling material? PLoS One 2018; 13:e0203948. [PMID: 30240428 PMCID: PMC6150510 DOI: 10.1371/journal.pone.0203948] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Accepted: 08/30/2018] [Indexed: 01/23/2023] Open
Abstract
Many of the challenges we currently face as an advanced society have been solved in unique ways by biological systems. One such challenge is developing strategies to avoid microbial infection. Social aculeates (wasps, bees and ants) mitigate the risk of infection to their colonies using a wide range of adaptations and mechanisms. These adaptations and mechanisms are reliant on intricate social structures and are energetically costly for the colony. It seems likely that these species must have had alternative and simpler mechanisms in place to ensure the maintenance of hygienic domicile conditions prior to the evolution of these complex behaviours. Features of the aculeate coiled-coil silk proteins are reminiscent of those of naturally occurring α-helical antimicrobial peptides (AMPs). In this study, we demonstrate that peptides derived from the aculeate silk proteins have antimicrobial activity. We reconstruct the predicted ancestral silk sequences of an aculeate ancestor that pre-dates the evolution of sociality and demonstrate that these ancestral sequences also contained peptides with antimicrobial properties. It is possible that the silks evolved as an antifouling material and facilitated the evolution of sociality. These materials serve as model materials for consideration in future biomaterial development.
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Affiliation(s)
- Tara D. Sutherland
- CSIRO (The Commonwealth Scientific and Industrial Research Organisation), Health and Biosecurity, Canberra, Australian Capital Territory, Australia
| | - Alagacone Sriskantha
- CSIRO (The Commonwealth Scientific and Industrial Research Organisation), Health and Biosecurity, Canberra, Australian Capital Territory, Australia
| | - Trevor D. Rapson
- CSIRO (The Commonwealth Scientific and Industrial Research Organisation), Health and Biosecurity, Canberra, Australian Capital Territory, Australia
| | - Benjamin D. Kaehler
- Research School of Biology, Australian National University, Australian Capital Territory, Australia
| | - Gavin A. Huttley
- Research School of Biology, Australian National University, Australian Capital Territory, Australia
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24
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Villalobos S, Vamosi JC. Climate and habitat influences on bee community structure in Western Canada. CAN J ZOOL 2018. [DOI: 10.1139/cjz-2017-0226] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The persistence of pollinators in a given habitat is determined in part by traits that affect their response to environmental variables. Here, we show that climate and habitat features are the main drivers of trait distribution in bees across spatially separated habitats. We determined that trait and clade filtering results in bee assemblages in Western Canada exhibiting clustering that is correlated with differences in temperature, humidity, and rainfall. Phylogenetic signals were detected in all traits associated with pollinator life-history strategies, including phenology. The Bombus Latreille, 1802 clade (including the social parasite subgenus Psithyrus Lepeletier, 1833) comprised a higher proportion of prairie bees, whereas assemblages in Garry oak sites exhibited higher representation from solitary bees (e.g., genera Osmia Panzer, 1806, Andrena Fabricius, 1775, Ceratina Latreille, 1802). Because these same traits influence which plant species are pollinated, this selective environmental occupancy within the two different habitats could promote local adaptation of flowering plant species pollinated by more social clades in prairies and more solitary bees in Garry oak.
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Affiliation(s)
- Soraya Villalobos
- Department of Biological Sciences, University of Calgary, 2500 University Drive Northwest, Calgary, AB T2N 1N4, Canada
- Department of Biological Sciences, University of Calgary, 2500 University Drive Northwest, Calgary, AB T2N 1N4, Canada
| | - Jana C. Vamosi
- Department of Biological Sciences, University of Calgary, 2500 University Drive Northwest, Calgary, AB T2N 1N4, Canada
- Department of Biological Sciences, University of Calgary, 2500 University Drive Northwest, Calgary, AB T2N 1N4, Canada
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25
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Evolution of Caste-Specific Chemical Profiles in Halictid Bees. J Chem Ecol 2018; 44:827-837. [PMID: 30014321 DOI: 10.1007/s10886-018-0991-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Revised: 06/26/2018] [Accepted: 07/09/2018] [Indexed: 12/17/2022]
Abstract
Chemical communication is crucial for the maintenance of colony organization in eusocial insects and chemical signals are known to mediate important aspects of their social life, including the regulation of reproduction. Sociality is therefore hypothesized to be accompanied by an increase in the complexity of chemical communication. However, little is known about the evolution of odor signals at the transition from solitary living to eusociality. Halictid bees are especially suitable models to study this question as they exhibit considerable variability in social behavior. Here we investigated whether the dissimilarities in cuticle chemical signals in females of different castes and life stages reflect the level of social complexity across halictid bee species. Our hypothesis was that species with a higher social behavior ergo obligate eusocial species possess a more distinct chemical profile between castes or female life stages. We analyzed cuticular chemical profiles of foundresses, breeding females and workers of ancestrally solitary species, facultative and obligate eusocial halictid species. We also tested whether social complexity was associated with a higher investment in chemical signals. Our results revealed higher chemical dissimilarity between castes in obligate than in facultative eusocial species, especially regarding macrocyclic lactones, which were the single common compound class overproduced in queens compared with workers. Chemical dissimilarities were independent of differences in ovarian status in obligate eusocial species but were dependent on ovarian status in facultative eusocial species, which we discuss in an evolutionary framework.
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26
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Rubin BER, Sanders JG, Turner KM, Pierce NE, Kocher SD. Social behaviour in bees influences the abundance of Sodalis (Enterobacteriaceae) symbionts. ROYAL SOCIETY OPEN SCIENCE 2018; 5:180369. [PMID: 30109092 PMCID: PMC6083661 DOI: 10.1098/rsos.180369] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2018] [Accepted: 06/07/2018] [Indexed: 06/08/2023]
Abstract
Social interactions can facilitate transmission of microbes between individuals, reducing variation in gut communities within social groups. Thus, the evolution of social behaviours and symbiont community composition have the potential to be tightly linked. We explored this connection by characterizing the diversity of bacteria associated with both eusocial and solitary bee species within the behaviourally variable family Halictidae using 16S amplicon sequencing. Contrary to expectations, we found few differences in bacterial abundance or variation between social forms; most halictid species appear to share similar gut bacterial communities. However, several strains of Sodalis, a genus described as a symbiont in a variety of insects but yet to be characterized in bees, differ in abundance between eusocial and solitary bees. Phylogenetic reconstructions based on whole-genome alignments indicate that Sodalis has independently colonized halictids at least three times. These strains appear to be mutually exclusive within individual bees, although they are not host-species-specific and no signatures of vertical transmission were observed, suggesting that Sodalis strains compete for access to hosts. The symbiosis between halictids and Sodalis therefore appears to be in its early stages.
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Affiliation(s)
- Benjamin E. R. Rubin
- Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA
| | - Jon G. Sanders
- Department of Pediatrics, University of California San Diego, La Jolla, CA, USA
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Kyle M. Turner
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
- Howard Hughes Medical Institute, Harvard University, Cambridge, MA, USA
| | - Naomi E. Pierce
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Sarah D. Kocher
- Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
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27
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Dew RM, Shell WA, Rehan SM. Changes in maternal investment with climate moderate social behaviour in a facultatively social bee. Behav Ecol Sociobiol 2018. [DOI: 10.1007/s00265-018-2488-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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28
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Limited social plasticity in the socially polymorphic sweat bee Lasioglossum calceatum. Behav Ecol Sociobiol 2018; 72:56. [PMID: 29568150 PMCID: PMC5845590 DOI: 10.1007/s00265-018-2475-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2017] [Revised: 02/02/2018] [Accepted: 03/02/2018] [Indexed: 11/12/2022]
Abstract
Abstract Eusociality is characterised by a reproductive division of labour, where some individuals forgo direct reproduction to instead help raise kin. Socially polymorphic sweat bees are ideal models for addressing the mechanisms underlying the transition from solitary living to eusociality, because different individuals in the same species can express either eusocial or solitary behaviour. A key question is whether alternative social phenotypes represent environmentally induced plasticity or predominantly genetic differentiation between populations. In this paper, we focus on the sweat bee Lasioglossum calceatum, in which northern or high-altitude populations are solitary, whereas more southern or low-altitude populations are typically eusocial. To test whether social phenotype responds to local environmental cues, we transplanted adult females from a solitary, northern population, to a southern site where native bees are typically eusocial. Nearly all native nests were eusocial, with foundresses producing small first brood (B1) females that became workers. In contrast, nine out of ten nests initiated by transplanted bees were solitary, producing female offspring that were the same size as the foundress and entered directly into hibernation. Only one of these ten nests became eusocial. Social phenotype was unlikely to be related to temperature experienced by nest foundresses when provisioning B1 offspring, or by B1 emergence time, both previously implicated in social plasticity seen in two other socially polymorphic sweat bees. Our results suggest that social polymorphism in L. calceatum predominantly reflects genetic differentiation between populations, and that plasticity is in the process of being lost by bees in northern populations. Significance statement Phenotypic plasticity is thought to play a key role in the early stages of the transition from solitary to eusocial behaviour, but may then be lost if environmental conditions become less variable. Socially polymorphic sweat bees exhibit either solitary or eusocial behaviour in different geographic populations, depending on the length of the nesting season. We tested for plasticity in the socially polymorphic sweat bee Lasioglossum calceatum by transplanting nest foundresses from a northern, non-eusocial population to a southern, eusocial population. Plasticity would be detected if transplanted bees exhibited eusocial behaviour. We found that while native bees were eusocial, 90% of transplanted bees and their offspring did not exhibit traits associated with eusociality. Environmental variables such as time of offspring emergence or temperatures experienced by foundresses during provisioning could not explain these differences. Our results suggest that the ability of transplanted bees to express eusociality is being lost, and that social polymorphism predominantly reflects genetic differences between populations. Electronic supplementary material The online version of this article (10.1007/s00265-018-2475-9) contains supplementary material, which is available to authorized users.
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29
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Branstetter MG, Childers AK, Cox-Foster D, Hopper KR, Kapheim KM, Toth AL, Worley KC. Genomes of the Hymenoptera. CURRENT OPINION IN INSECT SCIENCE 2018; 25:65-75. [PMID: 29602364 PMCID: PMC5993429 DOI: 10.1016/j.cois.2017.11.008] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Accepted: 11/16/2017] [Indexed: 05/06/2023]
Abstract
Hymenoptera is the second-most sequenced arthropod order, with 52 publically archived genomes (71 with ants, reviewed elsewhere), however these genomes do not capture the breadth of this very diverse order (Figure 1, Table 1). These sequenced genomes represent only 15 of the 97 extant families. Although at least 55 other genomes are in progress in an additional 11 families (see Table 2), stinging wasps represent 35 (67%) of the available and 42 (76%) of the in progress genomes. A more comprehensive catalog of hymenopteran genomes is needed for research into the evolutionary processes underlying the expansive diversity in terms of ecology, behavior, and physiological traits within this group. Additional sequencing is needed to generate an assembly for even 0.05% of the estimated 1 million hymenopteran species, and we recommend premier level assemblies for at least 0.1% of the >150,000 named species dispersed across the order. Given the haplodiploid sex determination in Hymenoptera, haploid male sequencing will help minimize genome assembly issues to enable higher quality genome assemblies.
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Affiliation(s)
- Michael G Branstetter
- Pollinating Insect-biology, Management, Systematics Research Unit, USDA-ARS, Logan, UT 84322, United States
| | - Anna K Childers
- Bee Research Laboratory, USDA-ARS, Beltsville, MD 20705, United States
| | - Diana Cox-Foster
- Pollinating Insect-biology, Management, Systematics Research Unit, USDA-ARS, Logan, UT 84322, United States
| | - Keith R Hopper
- Beneficial Insects Introduction Research Unit, USDA-ARS, Newark, DE 19713, United States
| | - Karen M Kapheim
- Utah State University, Department of Biology, Logan, UT 84322, United States
| | - Amy L Toth
- Iowa State University, Department of Ecology, Evolution, and Organismal Biology and Department of Entomology, Ames, IA 50011, United States
| | - Kim C Worley
- Human Genome Sequencing Center, and Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, United States
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30
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Kapheim KM, Johnson MM. Support for the reproductive ground plan hypothesis in a solitary bee: links between sucrose response and reproductive status. Proc Biol Sci 2018; 284:rspb.2016.2406. [PMID: 28100820 DOI: 10.1098/rspb.2016.2406] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2016] [Accepted: 12/15/2016] [Indexed: 01/29/2023] Open
Abstract
In social bees, foraging behaviour is correlated with reproductive status and sucrose sensitivity via endocrine pathways. This association led to the hypothesis that division of labour in social insect societies is derived from an ancestral ground plan that functions to synchronize dietary preferences with reproductive needs in solitary insects. However, the relationship between these traits is unknown for solitary bees, which represent the ancestral state of social bees. We used the proboscis extension response assay to measure sucrose response among reproductive females of the solitary alkali bee (Nomia melanderi) as a function of acute juvenile hormone (JH) treatments and reproductive physiology. We also tested long-term effects of JH on reproductive development in newly emerged females. JH did not have short-term effects on reproductive physiology or sucrose response, but did have significant long-term effects on ovary and Dufour's gland development. Dufour's gland size, not ovary development, was a significant predictor of sucrose response. This provides support for the reproductive ground plan hypothesis, because the Dufour's gland has conserved reproductive functions in bees. Differing results from this study and honeybees suggest independent origins of division of labour may have evolved via co-option of different components of a conserved ground plan.
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Affiliation(s)
- Karen M Kapheim
- Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA
| | - Makenna M Johnson
- Department of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA
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Kapheim KM, Johnson MM. Juvenile hormone, but not nutrition or social cues, affects reproductive maturation in solitary alkali bees ( Nomia melanderi). ACTA ACUST UNITED AC 2017; 220:3794-3801. [PMID: 28821570 DOI: 10.1242/jeb.162255] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Accepted: 08/15/2017] [Indexed: 12/12/2022]
Abstract
Eusocial insect colonies are defined by extreme variation in reproductive activity among castes, but the ancestral conditions from which this variation arose are unknown. Investigating the factors that contribute to variation in reproductive physiology among solitary insects that are closely related to social species can help to fill this gap. We experimentally tested the role of nutrition, juvenile hormone (JH) and social cues on reproductive maturation in solitary alkali bees (Halictidae: Nomia melanderi). We found that alkali bee females emerge from overwintering with small Dufour's glands and small ovaries, containing oocytes in the early stages of development. Oocyte maturation occurs rapidly, and is staggered between the two ovaries. Lab-reared females reached reproductive maturity without access to mates or nesting opportunities, and many had resorbed oocytes. Initial activation of these reproductive structures does not depend on pollen consumption, though dietary protein or lipids may be necessary for long-term reproductive activity. JH is likely to be a limiting factor in alkali bee reproductive activation, as females treated with JH were more likely to develop mature oocytes and Dufour's glands. Unlike for related social bees, the effects of JH were not suppressed by the presence of older, reproductive females. These results provide valuable insight into the factors that influence reproductive activity in an important native pollinator, and those that may have been particularly influential in the evolution of reproductive castes.
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Affiliation(s)
- Karen M Kapheim
- Utah State University, Department of Biology, 5305 Old Main Hill, Logan, UT 84322, USA
| | - Makenna M Johnson
- Utah State University, Department of Biology, 5305 Old Main Hill, Logan, UT 84322, USA
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Wittwer B, Hefetz A, Simon T, Murphy LEK, Elgar MA, Pierce NE, Kocher SD. Solitary bees reduce investment in communication compared with their social relatives. Proc Natl Acad Sci U S A 2017; 114:6569-6574. [PMID: 28533385 PMCID: PMC5488929 DOI: 10.1073/pnas.1620780114] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Social animals must communicate to define group membership and coordinate social organization. For social insects, communication is predominantly mediated through chemical signals, and as social complexity increases, so does the requirement for a greater diversity of signals. This relationship is particularly true for advanced eusocial insects, including ants, bees, and wasps, whose chemical communication systems have been well-characterized. However, we know surprisingly little about how these communication systems evolve during the transition between solitary and group living. Here, we demonstrate that the sensory systems associated with signal perception are evolutionarily labile. In particular, we show that differences in signal production and perception are tightly associated with changes in social behavior in halictid bees. Our results suggest that social species require a greater investment in communication than their solitary counterparts and that species that have reverted from eusociality to solitary living have repeatedly reduced investment in these potentially costly sensory perception systems.
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Affiliation(s)
- Bernadette Wittwer
- School of BioSciences, University of Melbourne, Parkville, Melbourne, VIC 3010, Australia
| | - Abraham Hefetz
- Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 6997801, Israel
| | - Tovit Simon
- Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 6997801, Israel
| | - Li E K Murphy
- Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138
| | - Mark A Elgar
- School of BioSciences, University of Melbourne, Parkville, Melbourne, VIC 3010, Australia
| | - Naomi E Pierce
- Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138
| | - Sarah D Kocher
- Museum of Comparative Zoology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138;
- Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08540
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Toth AL, Rehan SM. Molecular Evolution of Insect Sociality: An Eco-Evo-Devo Perspective. ANNUAL REVIEW OF ENTOMOLOGY 2017; 62:419-442. [PMID: 27912247 DOI: 10.1146/annurev-ento-031616-035601] [Citation(s) in RCA: 71] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
The evolution of eusociality is a perennial issue in evolutionary biology, and genomic advances have fueled steadily growing interest in the genetic changes underlying social evolution. Along with a recent flurry of research on comparative and evolutionary genomics in different eusocial insect groups (bees, ants, wasps, and termites), several mechanistic explanations have emerged to describe the molecular evolution of eusociality from solitary behavior. These include solitary physiological ground plans, genetic toolkits of deeply conserved genes, evolutionary changes in protein-coding genes, cis regulation, and the structure of gene networks, epigenetics, and novel genes. Despite this proliferation of ideas, there has been little synthesis, even though these ideas are not mutually exclusive and may in fact be complementary. We review available data on molecular evolution of insect sociality and highlight key biotic and abiotic factors influencing social insect genomes. We then suggest both phylogenetic and ecological evolutionary developmental biology (eco-evo-devo) perspectives for a more synthetic view of molecular evolution in insect societies.
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Affiliation(s)
- Amy L Toth
- Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa 50011;
- Department of Entomology, Iowa State University, Ames, Iowa 50011
| | - Sandra M Rehan
- Department of Biological Sciences, University of New Hampshire, Durham, New Hampshire 03824;
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Jones BM, Kingwell CJ, Wcislo WT, Robinson GE. Caste-biased gene expression in a facultatively eusocial bee suggests a role for genetic accommodation in the evolution of eusociality. Proc Biol Sci 2017; 284:20162228. [PMID: 28053060 PMCID: PMC5247497 DOI: 10.1098/rspb.2016.2228] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 12/05/2016] [Indexed: 12/18/2022] Open
Abstract
Developmental plasticity may accelerate the evolution of phenotypic novelty through genetic accommodation, but studies of genetic accommodation often lack knowledge of the ancestral state to place selected traits in an evolutionary context. A promising approach for assessing genetic accommodation involves using a comparative framework to ask whether ancestral plasticity is related to the evolution of a particular trait. Bees are an excellent group for such comparisons because caste-based societies (eusociality) have evolved multiple times independently and extant species exhibit different modes of eusociality. We measured brain and abdominal gene expression in a facultatively eusocial bee, Megalopta genalis, and assessed whether plasticity in this species is functionally linked to eusocial traits in other bee lineages. Caste-biased abdominal genes in M. genalis overlapped significantly with caste-biased genes in obligately eusocial bees. Moreover, caste-biased genes in M. genalis overlapped significantly with genes shown to be rapidly evolving in multiple studies of 10 bee species, particularly for genes in the glycolysis pathway and other genes involved in metabolism. These results provide support for the idea that eusociality can evolve via genetic accommodation, with plasticity in facultatively eusocial species like M. genalis providing a substrate for selection during the evolution of caste in obligately eusocial lineages.
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Affiliation(s)
- Beryl M Jones
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Smithsonian Tropical Research Institute, Panama City 20521-9100, Panama
| | - Callum J Kingwell
- Smithsonian Tropical Research Institute, Panama City 20521-9100, Panama
- Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - William T Wcislo
- Smithsonian Tropical Research Institute, Panama City 20521-9100, Panama
| | - Gene E Robinson
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Department of Entomology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
- Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
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Korb J. Why do social insect queens live so long? Approaches to unravel the sociality-aging puzzle. CURRENT OPINION IN INSECT SCIENCE 2016; 16:104-107. [PMID: 27720043 DOI: 10.1016/j.cois.2016.06.004] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2016] [Revised: 05/02/2016] [Accepted: 06/07/2016] [Indexed: 05/25/2023]
Abstract
Social insects are characterized by an apparent reshaping of the fecundity/longevity trade-off with sociality. Currently, we have only sketchy information about the potential underlying causes and mechanisms of aging and senescence which in addition are restricted to few model insect organisms (mainly the fruit fly Drosophila melanogaster and the honey bee Apis mellifera). How can we gain a more thorough understanding how sociality shapes senescence and the fecundity/longevity trade-off? By reviewing available literature, I propose a comparative approach that offers the opportunity to gain fundamental insights into uncovering the basis for this life history trade-off and its reshaping with sociality.
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Affiliation(s)
- Judith Korb
- Evolutionary Biology & Ecology, University of Freiburg, Germany.
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36
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Schürch R, Accleton C, Field J. Consequences of a warming climate for social organisation in sweat bees. Behav Ecol Sociobiol 2016; 70:1131-1139. [PMID: 27478300 PMCID: PMC4954839 DOI: 10.1007/s00265-016-2118-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2015] [Revised: 02/16/2016] [Accepted: 04/01/2016] [Indexed: 12/05/2022]
Abstract
ABSTRACT The progression from solitary living to caste-based sociality is commonly regarded as a major evolutionary transition. However, it has recently been shown that in some taxa, sociality may be plastic and dependent on local conditions. If sociality can be environmentally driven, the question arises as to how projected climate change will influence features of social organisation that were previously thought to be of macroevolutionary proportions. Depending on the time available in spring during which a foundress can produce worker offspring, the sweat bee Halictus rubicundus is either social or solitary. We analysed detailed foraging data in relation to climate change predictions for Great Britain to assess when and where switches from a solitary to social lifestyle may be expected. We demonstrate that worker numbers should increase throughout Great Britain under predicted climate change scenarios, and importantly, that sociality should appear in northern areas where it has never before been observed. This dramatic shift in social organisation due to climate change should lead to a bigger workforce being available for summer pollination and may contribute towards mitigating the current pollinator crisis. SIGNIFICANCE STATEMENT The sweat bee Halictus rubicundus is socially polymorphic, expressing both solitary and social forms, and is socially plastic, capable of transitioning from solitary to social forms, depending on local environmental conditions. Here, we analyse detailed foraging data in relation to climate change predictions for Great Britain to show that worker numbers and sociality both increase under predicted climate change scenarios. Especially dramatic will be the appearance of social H. rubicundus nests in the north of Britain, where previously only solitary forms are found. Particularly, if more taxa are found to be socially plastic, environmentally driven shifts in social organisation may help to mitigate future pollinator crises by providing more individuals for pollination.
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Affiliation(s)
- Roger Schürch
- />School of Life Sciences, University of Sussex, Brighton, BN1 9QG UK
- />CTU Bern, Department of Clinical Research, University of Bern, Bern, Switzerland
- />Institute of Social and Preventive Medicine (ISPM), University of Bern, Bern, Switzerland
| | | | - Jeremy Field
- />School of Life Sciences, University of Sussex, Brighton, BN1 9QG UK
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Jones BM, Wcislo WT, Robinson GE. Developmental Transcriptome for a Facultatively Eusocial Bee, Megalopta genalis. G3 (BETHESDA, MD.) 2015; 5:2127-35. [PMID: 26276382 PMCID: PMC4592995 DOI: 10.1534/g3.115.021261] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2015] [Accepted: 08/12/2015] [Indexed: 11/18/2022]
Abstract
Transcriptomes provide excellent foundational resources for mechanistic and evolutionary analyses of complex traits. We present a developmental transcriptome for the facultatively eusocial bee Megalopta genalis, which represents a potential transition point in the evolution of eusociality. A de novo transcriptome assembly of Megalopta genalis was generated using paired-end Illumina sequencing and the Trinity assembler. Males and females of all life stages were aligned to this transcriptome for analysis of gene expression profiles throughout development. Gene Ontology analysis indicates that stage-specific genes are involved in ion transport, cell-cell signaling, and metabolism. A number of distinct biological processes are upregulated in each life stage, and transitions between life stages involve shifts in dominant functional processes, including shifts from transcriptional regulation in embryos to metabolism in larvae, and increased lipid metabolism in adults. We expect that this transcriptome will provide a useful resource for future analyses to better understand the molecular basis of the evolution of eusociality and, more generally, phenotypic plasticity.
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Affiliation(s)
- Beryl M Jones
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois, Urbana, Illinois 61801 Smithsonian Tropical Research Institute, Panama City, Panama 20521-9100 Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801
| | - William T Wcislo
- Smithsonian Tropical Research Institute, Panama City, Panama 20521-9100
| | - Gene E Robinson
- Program in Ecology, Evolution, and Conservation Biology, University of Illinois, Urbana, Illinois 61801 Department of Entomology, University of Illinois, Urbana, Illinois 61801 Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, Illinois 61801 Neuroscience Program, University of Illinois, Urbana, Illinois 61801
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38
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Zhou X, Rokas A, Berger SL, Liebig J, Ray A, Zwiebel LJ. Chemoreceptor Evolution in Hymenoptera and Its Implications for the Evolution of Eusociality. Genome Biol Evol 2015; 7:2407-16. [PMID: 26272716 PMCID: PMC4558866 DOI: 10.1093/gbe/evv149] [Citation(s) in RCA: 107] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
Eusocial insects, mostly Hymenoptera, have evolved unique colonial lifestyles that rely on the perception of social context mainly through pheromones, and chemoreceptors are hypothesized to have played important adaptive roles in the evolution of sociality. However, because chemoreceptor repertoires have been characterized in few social insects and their solitary relatives, a comprehensive examination of this hypothesis has not been possible. Here, we annotate ∼3,000 odorant and gustatory receptors in recently sequenced Hymenoptera genomes and systematically compare >4,000 chemoreceptors from 13 hymenopterans, representing one solitary lineage (wasps) and three independently evolved eusocial lineages (ants and two bees). We observe a strong general tendency for chemoreceptors to expand in Hymenoptera, whereas the specifics of gene gains/losses are highly diverse between lineages. We also find more frequent positive selection on chemoreceptors in a facultative eusocial bee and in the common ancestor of ants compared with solitary wasps. Our results suggest that the frequent expansions of chemoreceptors have facilitated the transition to eusociality. Divergent expression patterns of odorant receptors between honeybee and ants further indicate differential roles of chemoreceptors in parallel trajectories of social evolution.
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Affiliation(s)
- Xiaofan Zhou
- Department of Biological Sciences, Vanderbilt University
| | - Antonis Rokas
- Department of Biological Sciences, Vanderbilt University
| | - Shelley L Berger
- Department of Cell and Developmental Biology, University of Pennsylvania Department of Genetics, University of Pennsylvania Department of Biology, University of Pennsylvania
| | - Jürgen Liebig
- School of Life Sciences, Arizona State University, Tempe
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Bushmann SL, Drummond FA. Abundance and Diversity of Wild Bees (Hymenoptera: Apoidea) Found in Lowbush Blueberry Growing Regions of Downeast Maine. ENVIRONMENTAL ENTOMOLOGY 2015; 44:975-989. [PMID: 26314043 DOI: 10.1093/ee/nvv082] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 05/07/2015] [Indexed: 06/04/2023]
Abstract
Insect-mediated pollination is critical for lowbush blueberry (Ericaceae: Vaccinium angustifolium Aiton) fruit development. Past research shows a persistent presence of wild bees (Hymenoptera: Apoidea) providing pollination services even when commercial pollinators are present. We undertook the study to 1) provide a description of bee communities found in lowbush blueberry-growing regions, 2) identify field characteristics or farm management practices that influence those communities, 3) identify key wild bee pollinators that provide pollination services for the blueberry crop, and 4) identify non-crop plants found within the cropping system that provide forage for wild bees. During a 4-year period, we collected solitary and eusocial bees in over 40 fields during and after blueberry bloom, determining a management description for each field. We collected 4,474 solitary bees representing 124 species and 1,315 summer bumble bees representing nine species. No bumble bee species were previously unknown in Maine, yet we document seven solitary bee species new for the state. These include species of the genera Nomada, Lasioglossum, Calliopsis, and Augochloropsis. No field characteristic or farm management practice related to bee community structure, except bumble bee species richness was higher in certified organic fields. Pollen analysis determined scopal loads of 67-99% ericaceous pollen carried by five species of Andrena. Our data suggest two native ericaceous plants, Kalmia angustifolia L. and Gaylussacia baccata (Wangenheim), provide important alternative floral resources. We conclude that Maine blueberry croplands are populated with a species-rich bee community that fluctuates in time and space. We suggest growers develop and maintain wild bee forage and nest sites.
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40
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Rehan SM, Toth AL. Climbing the social ladder: the molecular evolution of sociality. Trends Ecol Evol 2015; 30:426-33. [PMID: 26051561 DOI: 10.1016/j.tree.2015.05.004] [Citation(s) in RCA: 105] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Revised: 05/11/2015] [Accepted: 05/12/2015] [Indexed: 11/24/2022]
Abstract
Genomic tools are allowing us to dissect the roles of genes and genetic architecture in social evolution, and eusocial insects are excellent models. Numerous hypotheses for molecular evolution of eusociality have been proposed, ranging from regulatory shifts in 'old' genes to rapid evolution of 'new' genes. A broad model to explain this major transition in evolution has been lacking. We provide a synthetic framework centered on the idea that different evolutionary processes dominate during different transitional stages, beginning with changes in gene regulation and culminating in novel genes later on. By considering multiple mechanisms as we 'climb the social ladder', we can test whether the transitions from solitary to simple sociality to complex sociality represent incremental changes or genetic revolutions.
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Affiliation(s)
- Sandra M Rehan
- Department of Biological Sciences, University of New Hampshire, Durham, NH 03824, USA.
| | - Amy L Toth
- Department of Evolution, Ecology, and Organismal Biology, and Department of Entomology, Iowa State University, Ames, IA 50011, USA
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41
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Gerth M, Saeed A, White JA, Bleidorn C. Extensive screen for bacterial endosymbionts reveals taxon-specific distribution patterns among bees (Hymenoptera, Anthophila). FEMS Microbiol Ecol 2015; 91:fiv047. [PMID: 25914139 DOI: 10.1093/femsec/fiv047] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/21/2015] [Indexed: 01/10/2023] Open
Abstract
Bacterial endosymbionts play key roles in arthropod biology, ranging from beneficial mutualists to parasitic sex ratio manipulators. The number of described endosymbiotic bacterial taxa has accumulated continuously in recent years. While the understanding of arthropod-microbe interactions has advanced significantly, especially in model organisms, relatively little is known about symbiont distribution and effects in non-model organisms. As a first step to alleviate this gap in understanding, we performed an endosymbiont survey in bees (Anthophila), an ecologically and economically important group of hymenopterans. To this end, we sampled 170 bee species and screened by PCR for the presence of Wolbachia, Rickettsia, Arsenophonus and Cardinium. Detected strains were then further diagnosed by additional markers. Additionally, we tested if certain ecological traits, bee phylogeny or geographic origin of bees explain endosymbiont distribution. Our results indicate that supergroup A Wolbachia are very common in bees and that their distribution can be significantly correlated to both host ecology and phylogeny, although a distinction of these factors is not possible. Furthermore, bees from the same region (Old World or New World) are more likely to harbour identical Wolbachia strains than expected by chance. Other endosymbionts (Rickettsia, Arsenophonus) were less common, and specific to particular host taxa, suggesting that host phylogeny is a major predictor for endosymbiont distribution in bees.
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Affiliation(s)
- Michael Gerth
- Molecular Evolution and Systematics of Animals, Institute for Biology, University of Leipzig, Talstrasse 33, D-04103 Leipzig, Germany
| | - Abiya Saeed
- Department of Entomology, S-225 Agricultural Science Center North, University of Kentucky, Lexington, KY 40546-0091, USA
| | - Jennifer A White
- Department of Entomology, S-225 Agricultural Science Center North, University of Kentucky, Lexington, KY 40546-0091, USA
| | - Christoph Bleidorn
- Molecular Evolution and Systematics of Animals, Institute for Biology, University of Leipzig, Talstrasse 33, D-04103 Leipzig, Germany German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5d, D-04103 Leipzig, Germany
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Gordon MS, Notar JC. Can systems biology help to separate evolutionary analogies (convergent homoplasies) from homologies? PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2015; 117:19-29. [PMID: 25620424 DOI: 10.1016/j.pbiomolbio.2015.01.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2014] [Revised: 01/13/2015] [Accepted: 01/13/2015] [Indexed: 12/22/2022]
Abstract
Convergent evolutionary analogies (homoplasies) of many kinds occur in diverse phylogenetic clades/lineages on both the animal and plant branches of the Tree of Life. Living organisms whose last common ancestors lived millions to hundreds of millions of years ago have later converged morphologically, behaviorally or at other levels of functionality (from molecular genetics through biochemistry, physiology and other organismic processes) as a result of long term strong natural selection that has constrained and channeled evolutionary processes. This happens most often when organisms belonging to different clades occupy ecological niches, habitats or environments sharing major characteristics that select for a relatively narrow range of organismic properties. Systems biology, broadly defined, provides theoretical and methodological approaches that are beginning to make it possible to answer a perennial evolutionary biological question relating to convergent homoplasies: Are at least some of the apparent analogies actually unrecognized homologies? This review provides an overview of the current state of knowledge of important aspects of this topic area. It also provides a resource describing many homoplasies that may be fruitful subjects for systems biological research.
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Affiliation(s)
- Malcolm S Gordon
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, USA.
| | - Julia C Notar
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, USA
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Ruch J, Riehl T, May-Collado LJ, Agnarsson I. Multiple origins of subsociality in crab spiders (Thomisidae). Mol Phylogenet Evol 2015; 82 Pt A:330-40. [DOI: 10.1016/j.ympev.2014.10.015] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2014] [Revised: 10/17/2014] [Accepted: 10/20/2014] [Indexed: 11/25/2022]
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44
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Berens AJ, Hunt JH, Toth AL. Comparative Transcriptomics of Convergent Evolution: Different Genes but Conserved Pathways Underlie Caste Phenotypes across Lineages of Eusocial Insects. Mol Biol Evol 2014; 32:690-703. [DOI: 10.1093/molbev/msu330] [Citation(s) in RCA: 132] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
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45
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Woodard SH, Bloch GM, Band MR, Robinson GE. Molecular heterochrony and the evolution of sociality in bumblebees (Bombus terrestris). Proc Biol Sci 2014; 281:20132419. [PMID: 24552837 DOI: 10.1098/rspb.2013.2419] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Sibling care is a hallmark of social insects, but its evolution remains challenging to explain at the molecular level. The hypothesis that sibling care evolved from ancestral maternal care in primitively eusocial insects has been elaborated to involve heterochronic changes in gene expression. This elaboration leads to the prediction that workers in these species will show patterns of gene expression more similar to foundress queens, who express maternal care behaviour, than to established queens engaged solely in reproductive behaviour. We tested this idea in bumblebees (Bombus terrestris) using a microarray platform with approximately 4500 genes. Unlike the wasp Polistes metricus, in which support for the above prediction has been obtained, we found that patterns of brain gene expression in foundress and queen bumblebees were more similar to each other than to workers. Comparisons of differentially expressed genes derived from this study and gene lists from microarray studies in Polistes and the honeybee Apis mellifera yielded a shared set of genes involved in the regulation of related social behaviours across independent eusocial lineages. Together, these results suggest that multiple independent evolutions of eusociality in the insects might have involved different evolutionary routes, but nevertheless involved some similarities at the molecular level.
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Affiliation(s)
- S Hollis Woodard
- Department of Integrative Biology, University of Texas at Austin, , Austin, TX 78712, USA, Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, , Jerusalem 91904, Israel, W. M. Keck Center for Comparative and Functional Genomics, University of Illinois, , Urbana, IL 61801, USA, Department of Entomology, University of Illinois, , Urbana, IL 61801, USA, Institute for Genomic Biology, University of Illinois, , Urbana, IL 61801, USA, Neuroscience Program, University of Illinois, , Urbana, IL 61801, USA
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Kocher SD, Li C, Yang W, Tan H, Yi SV, Yang X, Hoekstra HE, Zhang G, Pierce NE, Yu DW. The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes. Genome Biol 2013; 14:R142. [PMID: 24359881 PMCID: PMC4062844 DOI: 10.1186/gb-2013-14-12-r142] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2013] [Accepted: 12/20/2013] [Indexed: 01/08/2023] Open
Abstract
BACKGROUND Taxa that harbor natural phenotypic variation are ideal for ecological genomic approaches aimed at understanding how the interplay between genetic and environmental factors can lead to the evolution of complex traits. Lasioglossum albipes is a polymorphic halictid bee that expresses variation in social behavior among populations, and common-garden experiments have suggested that this variation is likely to have a genetic component. RESULTS We present the L. albipes genome assembly to characterize the genetic and ecological factors associated with the evolution of social behavior. The de novo assembly is comparable to other published social insect genomes, with an N50 scaffold length of 602 kb. Gene families unique to L. albipes are associated with integrin-mediated signaling and DNA-binding domains, and several appear to be expanded in this species, including the glutathione-s-transferases and the inositol monophosphatases. L. albipes has an intact DNA methylation system, and in silico analyses suggest that methylation occurs primarily in exons. Comparisons to other insect genomes indicate that genes associated with metabolism and nucleotide binding undergo accelerated evolution in the halictid lineage. Whole-genome resequencing data from one solitary and one social L. albipes female identify six genes that appear to be rapidly diverging between social forms, including a putative odorant receptor and a cuticular protein. CONCLUSIONS L. albipes represents a novel genetic model system for understanding the evolution of social behavior. It represents the first published genome sequence of a primitively social insect, thereby facilitating comparative genomic studies across the Hymenoptera as a whole.
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Affiliation(s)
- Sarah D Kocher
- Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA
- China National GeneBank, BGI-Shenzhen, Shenzen 518083, China
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Kunming, Yunnan 650223, China
| | - Cai Li
- China National GeneBank, BGI-Shenzhen, Shenzen 518083, China
- Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, Copenhagen 1350, Denmark
| | - Wei Yang
- China National GeneBank, BGI-Shenzhen, Shenzen 518083, China
| | - Hao Tan
- China National GeneBank, BGI-Shenzhen, Shenzen 518083, China
| | - Soojin V Yi
- School of Biology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Xingyu Yang
- School of Biology, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Hopi E Hoekstra
- Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA
- Department of Molecular and Cellular Biology, Howard Hughes Medical Institute, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA
| | - Guojie Zhang
- China National GeneBank, BGI-Shenzhen, Shenzen 518083, China
- Centre for Social Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, Copenhagen DK-2100, Denmark
| | - Naomi E Pierce
- Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA
| | - Douglas W Yu
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Kunming, Yunnan 650223, China
- School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, Norfolk NR47TJ, UK
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Groom SV, Stevens MI, Schwarz MP. Diversification of Fijian halictine bees: Insights into a recent island radiation. Mol Phylogenet Evol 2013; 68:582-94. [DOI: 10.1016/j.ympev.2013.04.015] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Revised: 03/26/2013] [Accepted: 04/08/2013] [Indexed: 10/26/2022]
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48
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Cardinal S, Danforth BN. Bees diversified in the age of eudicots. Proc Biol Sci 2013; 280:20122686. [PMID: 23363629 PMCID: PMC3574388 DOI: 10.1098/rspb.2012.2686] [Citation(s) in RCA: 121] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2012] [Accepted: 01/04/2013] [Indexed: 11/12/2022] Open
Abstract
Reliable estimates on the ages of the major bee clades are needed to further understand the evolutionary history of bees and their close association with flowering plants. Divergence times have been estimated for a few groups of bees, but no study has yet provided estimates for all major bee lineages. To date the origin of bees and their major clades, we first perform a phylogenetic analysis of bees including representatives from every extant family, subfamily and almost all tribes, using sequence data from seven genes. We then use this phylogeny to place 14 time calibration points based on information from the fossil record for an uncorrelated relaxed clock divergence time analysis taking into account uncertainties in phylogenetic relationships and the fossil record. We explore the effect of placing a hard upper age bound near the root of the tree and the effect of different topologies on our divergence time estimates. We estimate that crown bees originated approximately 123 Ma (million years ago) (113-132 Ma), concurrently with the origin or diversification of the eudicots, a group comprising 75 per cent of angiosperm species. All of the major bee clades are estimated to have originated during the Middle to Late Cretaceous, which is when angiosperms became the dominant group of land plants.
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Affiliation(s)
- Sophie Cardinal
- Agriculture and Agri-Food Canada, Canadian National Collection of Insects, Ottawa, Ontario, Canada.
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Majer M, Svenning JC, Bilde T. Habitat productivity constrains the distribution of social spiders across continents - case study of the genus Stegodyphus. Front Zool 2013; 10:9. [PMID: 23433065 PMCID: PMC3599804 DOI: 10.1186/1742-9994-10-9] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2012] [Accepted: 02/11/2013] [Indexed: 12/04/2022] Open
Abstract
INTRODUCTION Sociality has evolved independently multiple times across the spider phylogeny, and despite wide taxonomic and geographical breadth the social species are characterized by a common geographical constrain to tropical and subtropical areas. Here we investigate the environmental factors that drive macro-ecological patterns in social and solitary species in a genus that shows a Mediterranean-Afro-Oriental distribution (Stegodyphus). Both selected drivers (productivity and seasonality) may affect the abundance of potential prey insects, but seasonality may further directly affect survival due to mortality caused by extreme climatic events. Based on a comprehensive dataset including information about the distribution of three independently derived social species and 13 solitary congeners we tested the hypotheses that the distribution of social Stegodyphus species relative to solitary congeners is: (1) restricted to habitats of high vegetation productivity and (2) constrained to areas with a stable climate (low precipitation seasonality). RESULTS Using spatial logistic regression modelling and information-theoretic model selection, we show that social species occur at higher vegetation productivity than solitary, while precipitation seasonality received limited support as a predictor of social spider occurrence. An analysis of insect biomass data across the Stegodyphus distribution range confirmed that vegetation productivity is positively correlated to potential insect prey biomass. CONCLUSIONS Habitat productivity constrains the distribution of social spiders across continents compared to their solitary congeners, with group-living in spiders being restricted to areas with relatively high vegetation productivity and insect prey biomass. As known for other taxa, permanent sociality likely evolves in response to high predation pressure and imposes within-group competition for resources. Our results suggest that group living is contingent upon productive environmental conditions where elevated prey abundance meet the increased demand for food of social groups.
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Affiliation(s)
- Marija Majer
- Department of Bioscience, Aarhus University, Ny Munkegade 116, Aarhus-C, 8000, Denmark
| | | | - Trine Bilde
- Department of Bioscience, Aarhus University, Ny Munkegade 116, Aarhus-C, 8000, Denmark
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Gibbs J, Brady SG, Kanda K, Danforth BN. Phylogeny of halictine bees supports a shared origin of eusociality for Halictus and Lasioglossum (Apoidea: Anthophila: Halictidae). Mol Phylogenet Evol 2012; 65:926-39. [DOI: 10.1016/j.ympev.2012.08.013] [Citation(s) in RCA: 101] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2012] [Revised: 07/30/2012] [Accepted: 08/17/2012] [Indexed: 11/24/2022]
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