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Peichel CL, Bolnick DI, Brännström Å, Dieckmann U, Safran RJ. Speciation. Cold Spring Harb Perspect Biol 2025; 17:a041735. [PMID: 38858075 PMCID: PMC11875085 DOI: 10.1101/cshperspect.a041735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2024]
Abstract
What drives the emergence of new species has fascinated biologists since Darwin. Reproductive barriers to gene flow are a key step in the formation of species, and recent advances have shed new light on how these are established. Genetic, genomic, and comparative techniques, together with improved theoretical frameworks, are increasing our understanding of the underlying mechanisms. They are also helping us forecast speciation and reveal the impact of human activity.
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Affiliation(s)
- Catherine L Peichel
- Institute of Ecology and Evolution, University of Bern, 3012 Bern, Switzerland
| | - Daniel I Bolnick
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut 06269-3043, USA
| | - Åke Brännström
- Department of Mathematics and Mathematical Statistics, Umeå University, SE-901 87 Umeå, Sweden
- Complexity Science and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, 904-0495 Okinawa, Japan
- Advancing Systems Analysis Program, International Institute for Applied Systems Analysis, A-2361 Laxenburg, Austria
| | - Ulf Dieckmann
- Complexity Science and Evolution Unit, Okinawa Institute of Science and Technology Graduate University, 904-0495 Okinawa, Japan
- Advancing Systems Analysis Program, International Institute for Applied Systems Analysis, A-2361 Laxenburg, Austria
- Department of Evolutionary Studies of Biosystems, The Graduate University for Advanced Studies, 240-0193 Kanagawa, Japan
| | - Rebecca J Safran
- Department of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, Colorado 80309-0334, USA
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Schwartz-Marin E, Jiwani T, Abel S, Egorova Y, M’charek A, Meyer D, Moreno Estrada A, Schramm K, Wade P, Naslavsky M. Genetic ancestry and the colonial legacies of race in genomics: a cross-disciplinary dialogue. Front Genet 2025; 15:1523406. [PMID: 39917177 PMCID: PMC11799264 DOI: 10.3389/fgene.2024.1523406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2024] [Accepted: 12/26/2024] [Indexed: 02/09/2025] Open
Abstract
As genomics initiatives have spread around the world-often in the name of genetic diversity and inclusion-they have not only invoked promises of a medical revolution, but also revived categories of human difference that resemble erstwhile racial classifications. This is despite the fact that geneticists broadly dismissed racial categories as obsolete and unfounded after the Human Genome Project was completed in 2003. In fact, contemporary genomics initiatives have often ended up reinforcing ethnocentric and nativist conceptions of difference, drawing intense criticism from activists and critical social scientists. This roundtable brings leading population geneticists grappling with the question of genetic identity and ancestry, especially in the global South, together with some of the most prominent scholars of race in genomics. The result is an engaging and insightful dialogue on questions that have vexed the field for decades. How do we-indeed "can" we reconcile the boundaries of biological and social difference? How do notions of "genetic ancestry" and "biogeographical ancestry differ from erstwhile racial and ethnic categories? Can racial categories ever be shorn of their colonial and oppressive legacies? Here we scrutinise the methodological and epistemological frameworks in contemporary genomics that work to define populations and shape our understanding of biology, society, health, and disease. We seek to clarify perspectives across the disciplinary divide, and to advance constructive and grounded critiques that contend with the question of justice in genomics.
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Affiliation(s)
- Ernesto Schwartz-Marin
- Department of Sociology, Philosophy, and Anthropology, University of Exeter, Exeter, United Kingdom
| | - Tayyaba Jiwani
- Department of Sociology, Philosophy, and Anthropology, University of Exeter, Exeter, United Kingdom
| | - Sarah Abel
- Institute for Philosophical Research, National Autonomous University of Mexico, Mexico City, Mexico
| | - Yulia Egorova
- Department of Anthropology, University of Durham, Durham, United Kingdom
| | - Amade M’charek
- Department of Anthropology, University of Amsterdam, Amsterdam, Netherlands
| | - Diogo Meyer
- Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, São Paulo, Brazil
| | - Andrés Moreno Estrada
- Advanced Genomics Unit, Center for Research and Advanced Studies (Cinvestav), Mexico City, Mexico
| | - Katharina Schramm
- Faculty of Humanities and Social Sciences, University of Bayreuth, Bayreuth, Germany
| | - Peter Wade
- Department of Social Anthropology, University of Manchester, Manchester, United Kingdom
| | - Michel Naslavsky
- Department of Genetics and Evolutionary Biology, Biosciences Institute of the University of São Paulo, São Paulo, Brazil
- Hospital Israelita Albert Einstein, São Paulo, Brazil
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Graves J. Population descriptors and behavioural genetic research. Nat Hum Behav 2024; 8:194-196. [PMID: 38057371 DOI: 10.1038/s41562-023-01772-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023]
Affiliation(s)
- Joseph Graves
- Department of Biology, North Carolina A&T State University, Greensboro, NC, USA.
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King DE, Lalwani PD, Mercado GP, Dolan EL, Frierson JM, Meyer JN, Murphy SK. The use of race terms in epigenetics research: considerations moving forward. Front Genet 2024; 15:1348855. [PMID: 38356697 PMCID: PMC10864599 DOI: 10.3389/fgene.2024.1348855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 01/11/2024] [Indexed: 02/16/2024] Open
Abstract
The field of environmental epigenetics is uniquely suited to investigate biologic mechanisms that have the potential to link stressors to health disparities. However, it is common practice in basic epigenetic research to treat race as a covariable in large data analyses in a way that can perpetuate harmful biases without providing any biologic insight. In this article, we i) propose that epigenetic researchers open a dialogue about how and why race is employed in study designs and think critically about how this might perpetuate harmful biases; ii) call for interdisciplinary conversation and collaboration between epigeneticists and social scientists to promote the collection of more detailed social metrics, particularly institutional and structural metrics such as levels of discrimination that could improve our understanding of individual health outcomes; iii) encourage the development of standards and practices that promote full transparency about data collection methods, particularly with regard to race; and iv) encourage the field of epigenetics to continue to investigate how social structures contribute to biological health disparities, with a particular focus on the influence that structural racism may have in driving these health disparities.
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Affiliation(s)
- Dillon E. King
- Nicholas School of the Environment, Duke University, Durham, NC, United States
- Department of Obstetrics and Gynecology, Duke University School of Medicine, Durham, NC, United States
| | - Pooja D. Lalwani
- Nicholas School of the Environment, Duke University, Durham, NC, United States
| | - Gilberto Padilla Mercado
- Department of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, NC, United States
| | - Emma L. Dolan
- Department of Obstetrics and Gynecology, Duke University School of Medicine, Durham, NC, United States
- Department of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC, United States
| | - Johnna M. Frierson
- IDEALS Office, Duke University School of Medicine, Durham, NC, United States
| | - Joel N. Meyer
- Nicholas School of the Environment, Duke University, Durham, NC, United States
| | - Susan K. Murphy
- Nicholas School of the Environment, Duke University, Durham, NC, United States
- Department of Obstetrics and Gynecology, Duke University School of Medicine, Durham, NC, United States
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