1
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Santra I, Olsen KS, Gupta D. Dynamics of switching processes: general results and applications in intermittent active motion. SOFT MATTER 2024. [PMID: 39545602 DOI: 10.1039/d4sm01054j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2024]
Abstract
Systems switching between different dynamical phases is a ubiquitous phenomenon. The general understanding of such a process is limited. To this end, we present a general expression that captures fluctuations of a system exhibiting a switching mechanism. Specifically, we obtain an exact expression of the Laplace-transformed characteristic function of the particle's position. Then, the characteristic function is used to compute the effective diffusion coefficient of a system performing intermittent dynamics. Furthermore, we employ two examples: (1) generalized run-and-tumble active particle, and (2) an active particle switching its dynamics between generalized active run-and-tumble motion and passive Brownian motion. In each case, explicit computations of the spatial cumulants are presented. Our findings reveal that the particle's position probability density function exhibit rich behaviours due to intermittent activity. Numerical simulations confirm our findings.
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Affiliation(s)
- Ion Santra
- Institute for Theoretical Physics, Georg-August Universität Göttingen, 37077 Göttingen, Germany.
| | - Kristian Stølevik Olsen
- Institut für Theoretische Physik II - Weiche Materie, Heinrich-Heine-Universität Düsseldorf, D-40225 Düsseldorf, Germany.
| | - Deepak Gupta
- Department of Physics, Indian Institute of Technology Indore, Khandwa Road, Simrol, Indore-453552, India
- Nordita, Royal Institute of Technology and Stockholm University, Hannes Alfvéns väg 12, 23, SE-106 91 Stockholm, Sweden.
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2
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Paul S, Dhar A, Chaudhuri D. Dynamical crossovers and correlations in a harmonic chain of active particles. SOFT MATTER 2024; 20:8638-8653. [PMID: 39435525 DOI: 10.1039/d4sm00350k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2024]
Abstract
We explore the dynamics of a tracer in an active particle harmonic chain, investigating the influence of interactions. Our analysis involves calculating mean-squared displacements (MSDs) and space-time correlations through Green's function techniques and numerical simulations. Depending on chain characteristics, i.e., different time scales determined by interaction stiffness and persistence of activity, tagged-particle MSDs exhibit ballistic, diffusive, and single-file diffusion (SFD) scaling over time, with crossovers explained by our analytic expressions. Our results reveal transitions in bulk particle displacement distributions from an early-time bimodal to late-time Gaussian, passing through regimes of unimodal distributions with finite support and negative excess kurtosis and longer-tailed distributions with positive excess kurtosis. The distributions exhibit data collapse, aligning with ballistic, diffusive, and SFD scaling in the appropriate time regimes. However, at much longer times, the distributions become Gaussian. Finally, we derive analytic expressions for steady-state static and dynamic two-point displacement correlations. We verify these from simulations and highlight the differences from the equilibrium results.
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Affiliation(s)
- Subhajit Paul
- International Center for Theoretical Sciences, Tata Institute of Fundamental Research, Bangalore-560089, India.
- Department of Physics and Astrophysics, University of Delhi, Delhi-110007, India.
| | - Abhishek Dhar
- International Center for Theoretical Sciences, Tata Institute of Fundamental Research, Bangalore-560089, India.
| | - Debasish Chaudhuri
- Institute of Physics, Sachivalaya Marg, Bhubaneswar-751005, India.
- Homi Bhabha National Institute, Anushaktinagar, Mumbai-400094, India
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3
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Yoshida M, Mizuno H, Ikeda A. Structural fluctuations in active glasses. SOFT MATTER 2024; 20:7678-7691. [PMID: 39291805 DOI: 10.1039/d4sm00821a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/19/2024]
Abstract
The glassy dynamics of dense active matter have recently become a topic of interest due to their importance in biological processes such as wound healing and tissue development. However, while the liquid-state properties of dense active matter have been studied in relation to the glass transition of active matter, the solid-state properties of active glasses have yet to be understood. In this work, we study the structural fluctuations in the active glasses composed of self-propelled particles. We develop a formalism to describe the solid-state properties of active glasses in the harmonic approximation limit and use it to analyze the displacement fields in the active glasses. Our findings reveal that the dynamics of high-frequency normal modes become quasi-static with respect to the active forces, and consequently, excitations of these modes are significantly suppressed. This leads to a violation of the equipartition law, suppression of particle displacements, and the apparent collective motion of active glasses. Overall, our results provide a fundamental understanding of the solid-state properties of active glasses.
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Affiliation(s)
- Masaki Yoshida
- Graduate School of Arts and Sciences, The University of Tokyo, Tokyo 153-8902, Japan.
| | - Hideyuki Mizuno
- Graduate School of Arts and Sciences, The University of Tokyo, Tokyo 153-8902, Japan.
| | - Atsushi Ikeda
- Graduate School of Arts and Sciences, The University of Tokyo, Tokyo 153-8902, Japan.
- Research Center for Complex Systems Biology, Universal Biology Institute, The University of Tokyo, Tokyo 153-8902, Japan
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4
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Goswami K, Cherstvy AG, Godec A, Metzler R. Anomalous diffusion of active Brownian particles in responsive elastic gels: Nonergodicity, non-Gaussianity, and distributions of trapping times. Phys Rev E 2024; 110:044609. [PMID: 39562954 DOI: 10.1103/physreve.110.044609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2024] [Accepted: 09/24/2024] [Indexed: 11/21/2024]
Abstract
Understanding actual transport mechanisms of self-propelled particles (SPPs) in complex elastic gels-such as in the cell cytoplasm, in in vitro networks of chromatin or of F-actin fibers, or in mucus gels-has far-reaching consequences. Implications beyond biology/biophysics are in engineering and medicine, with a particular focus on microrheology and on targeted drug delivery. Here, we examine via extensive computer simulations the dynamics of SPPs in deformable gellike structures responsive to thermal fluctuations. We treat tracer particles comparable to and larger than the mesh size of the gel. We observe distinct trapping events of active tracers at relatively short times, leading to subdiffusion; it is followed by an escape from meshwork-induced traps due to the flexibility of the network, resulting in superdiffusion. We thus find crossovers between different transport regimes. We also find pronounced nonergodicity in the dynamics of SPPs and non-Gaussianity at intermediate times. The distributions of trapping times of the tracers escaping from "cages" in our quasiperiodic gel often reveal the existence of two distinct timescales in the dynamics. At high activity of the tracers these timescales become comparable. Furthermore, we find that the mean waiting time exhibits a power-law dependence on the activity of SPPs (in terms of their Péclet number). Our results additionally showcase both exponential and nonexponential trapping events at high activities. Extensions of this setup are possible, with the factors such as anisotropy of the particles, different topologies of the gel network, and various interactions between the particles (also of a nonlocal nature) to be considered.
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5
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Paramanick S, Pal A, Soni H, Kumar N. Programming tunable active dynamics in a self-propelled robot. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2024; 47:34. [PMID: 38782771 DOI: 10.1140/epje/s10189-024-00430-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 04/28/2024] [Indexed: 05/25/2024]
Abstract
We present a scheme for producing tunable active dynamics in a self-propelled robotic device. The robot moves using the differential drive mechanism where two wheels can vary their instantaneous velocities independently. These velocities are calculated by equating robot's equations of motion in two dimensions with well-established active particle models and encoded into the robot's microcontroller. We demonstrate that the robot can depict active Brownian, run and tumble, and Brownian dynamics with a wide range of parameters. The resulting motion analyzed using particle tracking shows excellent agreement with the theoretically predicted trajectories. Later, we show that its motion can be switched between different dynamics using light intensity as an external parameter. Intriguingly, we demonstrate that the robot can efficiently navigate through many obstacles by performing stochastic reorientations driven by the gradient in light intensity towards a desired location, namely the target. This work opens an avenue for designing tunable active systems with the potential of revealing the physics of active matter and its application for bio- and nature-inspired robotics.
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Affiliation(s)
- Somnath Paramanick
- Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Arnab Pal
- The Institute of Mathematical Sciences, CIT Campus, Taramani, Chennai, 600113, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India
| | - Harsh Soni
- School of Physical Sciences, Indian Institute of Technology Mandi, Mandi, 175001, India
| | - Nitin Kumar
- Department of Physics, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India.
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6
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Mukherjee S, Smith NR. Large deviations in statistics of the convex hull of passive and active particles: A theoretical study. Phys Rev E 2024; 109:044120. [PMID: 38755832 DOI: 10.1103/physreve.109.044120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Accepted: 03/08/2024] [Indexed: 05/18/2024]
Abstract
We investigate analytically the distribution tails of the area A and perimeter L of a convex hull for different types of planar random walks. For N noninteracting Brownian motions of duration T we find that the large-L and -A tails behave as P(L)∼e^{-b_{N}L^{2}/DT} and P(A)∼e^{-c_{N}A/DT}, while the small-L and -A tails behave as P(L)∼e^{-d_{N}DT/L^{2}} and P(A)∼e^{-e_{N}DT/A}, where D is the diffusion coefficient. We calculated all of the coefficients (b_{N},c_{N},d_{N},e_{N}) exactly. Strikingly, we find that b_{N} and c_{N} are independent of N for N≥3 and N≥4, respectively. We find that the large-L (A) tails are dominated by a single, most probable realization that attains the desired L (A). The left tails are dominated by the survival probability of the particles inside a circle of appropriate size. For active particles and at long times, we find that large-L and -A tails are given by P(L)∼e^{-TΨ_{N}^{per}(L/T)} and P(A)∼e^{-TΨ_{N}^{area}(sqrt[A]/T)}, respectively. We calculate the rate functions Ψ_{N} exactly and find that they exhibit multiple singularities. We interpret these as DPTs of first order. We extended several of these results to dimensions d>2. Our analytic predictions display excellent agreement with existing results that were obtained from extensive numerical simulations.
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Affiliation(s)
- Soheli Mukherjee
- Department of Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000, Israel
| | - Naftali R Smith
- Department of Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000, Israel
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7
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Farago O, Smith NR. Confined run-and-tumble particles with non-Markovian tumbling statistics. Phys Rev E 2024; 109:044121. [PMID: 38755884 DOI: 10.1103/physreve.109.044121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 03/20/2024] [Indexed: 05/18/2024]
Abstract
Confined active particles constitute simple, yet realistic, examples of systems that converge into a nonequilibrium steady state. We investigate a run-and-tumble particle in one spatial dimension, trapped by an external potential, with a given distribution g(t) of waiting times between tumbling events whose mean value is equal to τ. Unless g(t) is an exponential distribution (corresponding to a constant tumbling rate), the process is non-Markovian, which makes the analysis of the model particularly challenging. We use an analytical framework involving effective position-dependent tumbling rates to develop a numerical method that yields the full steady-state distribution (SSD) of the particle's position. The method is very efficient and requires modest computing resources, including in the large-deviation and/or small-τ regime, where the SSD can be related to the the large-deviation function, s(x), via the scaling relation P_{st}(x)∼e^{-s(x)/τ}.
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Affiliation(s)
- Oded Farago
- Department of Biomedical Engineering, Ben-Gurion University of the Negev, Marcus Family Campus, Be'er Sheva 8410501, Israel
| | - Naftali R Smith
- Department of Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Be'er Sheva 8499000, Israel
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8
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Caraglio M, Kaur H, Fiderer LJ, López-Incera A, Briegel HJ, Franosch T, Muñoz-Gil G. Learning how to find targets in the micro-world: the case of intermittent active Brownian particles. SOFT MATTER 2024; 20:2008-2016. [PMID: 38328899 PMCID: PMC10900891 DOI: 10.1039/d3sm01680c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Accepted: 01/29/2024] [Indexed: 02/09/2024]
Abstract
Finding the best strategy to minimize the time needed to find a given target is a crucial task both in nature and in reaching decisive technological advances. By considering learning agents able to switch their dynamics between standard and active Brownian motion, here we focus on developing effective target-search behavioral policies for microswimmers navigating a homogeneous environment and searching for targets of unknown position. We exploit projective simulation, a reinforcement learning algorithm, to acquire an efficient stochastic policy represented by the probability of switching the phase, i.e. the navigation mode, in response to the type and the duration of the current phase. Our findings reveal that the target-search efficiency increases with the particle's self-propulsion during the active phase and that, while the optimal duration of the passive case decreases monotonically with the activity, the optimal duration of the active phase displays a non-monotonic behavior.
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Affiliation(s)
- Michele Caraglio
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Harpreet Kaur
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Lukas J Fiderer
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Andrea López-Incera
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Hans J Briegel
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Thomas Franosch
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
| | - Gorka Muñoz-Gil
- Institut für Theoretische Physik, Universität Innsbruck, Technikerstraße 21A, A-6020, Innsbruck, Austria.
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9
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Smith NR. Nonequilibrium steady state of trapped active particles. Phys Rev E 2023; 108:L022602. [PMID: 37723780 DOI: 10.1103/physreve.108.l022602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 07/26/2023] [Indexed: 09/20/2023]
Abstract
We consider an overdamped particle with a general physical mechanism that creates noisy active movement (e.g., a run-and-tumble particle or active Brownian particle, etc.), that is confined by an external potential. Focusing on the limit in which the correlation time τ of the active noise is small, we find the nonequilibrium steady-state distribution P_{st}(X) of the particle's position X. While typical fluctuations of X follow a Boltzmann distribution with an effective temperature that is not difficult to find, the tails of P_{st}(X) deviate from a Boltzmann behavior: In the limit τ→0, they scale as P_{st}(X)∼e^{-s(X)/τ}. We calculate the large-deviation function s(X) exactly for arbitrary trapping potential and active noise in dimension d=1, by relating it to the rate function that describes large deviations of the position of the same active particle in absence of an external potential at long times. We then extend our results to d>1 assuming rotational symmetry.
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Affiliation(s)
- Naftali R Smith
- Department of Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000, Israel
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10
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Abstract
The state of a classical point-particle system may often be specified by giving the position and momentum for each constituent particle. For non-pointlike particles, the center-of-mass position may be augmented by an additional coordinate that specifies the internal state of each particle. The internal state space is typically topologically simple, in the sense that the particle's internal coordinate belongs to a suitable symmetry group. In this paper, we explore the idea of giving internal complexity to the particles, by attributing to each particle an internal state space that is represented by a point on a strange (or otherwise) attracting set. It is, of course, very well known that strange attractors arise in a variety of nonlinear dynamical systems. However, rather than considering strange attractors as emerging from complex dynamics, we may employ strange attractors to drive such dynamics. In particular, by using an attractor (strange or otherwise) to model each particle's internal state space, we present a class of matter coined "attractor-driven matter." We outline the general formalism for attractor-driven matter and explore several specific examples, some of which are reminiscent of active matter. Beyond the examples studied in this paper, our formalism for attractor-driven dynamics may be applicable more broadly, to model complex dynamical and emergent behaviors in a variety of contexts.
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Affiliation(s)
- R N Valani
- School of Mathematical Sciences, University of Adelaide, South Australia 5005, Australia
| | - D M Paganin
- School of Physics and Astronomy, Monash University, Victoria 3800, Australia
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11
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Stochastic Dynamics of Generalized Planar Random Motions with Orthogonal Directions. J THEOR PROBAB 2023. [DOI: 10.1007/s10959-022-01229-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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12
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Sarkar R, Santra I, Basu U. Stationary states of activity-driven harmonic chains. Phys Rev E 2023; 107:014123. [PMID: 36797958 DOI: 10.1103/physreve.107.014123] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Accepted: 12/22/2022] [Indexed: 01/19/2023]
Abstract
We study the stationary state of a chain of harmonic oscillators driven by two active reservoirs at the two ends. These reservoirs exert correlated stochastic forces on the boundary oscillators which eventually leads to a nonequilibrium stationary state of the system. We consider three most well-known dynamics for the active force, namely, the active Ornstein-Uhlenbeck process, run-and-tumble process, and active Brownian process, all of which have exponentially decaying two-point temporal correlations but very different higher-order fluctuations. We show that, irrespective of the specific dynamics of the drive, the stationary velocity fluctuations are Gaussian in nature with a kinetic temperature which remains uniform in the bulk. Moreover, we find the emergence of an "equipartition of energy" in the bulk of the system-the bulk kinetic temperature equals the bulk potential temperature in the thermodynamic limit. We also calculate the stationary distribution of the instantaneous energy current in the bulk which always shows a logarithmic divergence near the origin and asymmetric exponential tails. The signatures of specific active driving become visible in the behavior of the oscillators near the boundary. This is most prominent for the RTP- and ABP-driven chains where the boundary velocity distributions become non-Gaussian and the current distribution has a finite cutoff.
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Affiliation(s)
- Ritwick Sarkar
- S. N. Bose National Centre for Basic Sciences, Kolkata 700106, India
| | - Ion Santra
- Raman Research Institute, Bengaluru 560080, India
| | - Urna Basu
- S. N. Bose National Centre for Basic Sciences, Kolkata 700106, India.,Raman Research Institute, Bengaluru 560080, India
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13
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Smith NR, Farago O. Nonequilibrium steady state for harmonically confined active particles. Phys Rev E 2022; 106:054118. [PMID: 36559420 DOI: 10.1103/physreve.106.054118] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 10/11/2022] [Indexed: 06/17/2023]
Abstract
We study the full nonequilibrium steady-state distribution P_{st}(X) of the position X of a damped particle confined in a harmonic trapping potential and experiencing active noise whose correlation time τ_{c} is assumed to be very short. Typical fluctuations of X are governed by a Boltzmann distribution with an effective temperature that is found by approximating the noise as white Gaussian thermal noise. However, large deviations of X are described by a non-Boltzmann steady-state distribution. We find that, in the limit τ_{c}→0, they display the scaling behavior P_{st}(X)∼e^{-s(X)/τ_{c}}, where s(X) is the large-deviation function. We obtain an expression for s(X) for a general active noise and calculate it exactly for the particular case of telegraphic (dichotomous) noise.
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Affiliation(s)
- Naftali R Smith
- Department of Solar Energy and Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000, Israel
| | - Oded Farago
- Department of Biomedical Engineering, Ben-Gurion University of the Negev, Marcus Family Campus Be'er Sheva, 8410501, Israel
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14
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Smith NR, Le Doussal P, Majumdar SN, Schehr G. Exact position distribution of a harmonically confined run-and-tumble particle in two dimensions. Phys Rev E 2022; 106:054133. [PMID: 36559430 DOI: 10.1103/physreve.106.054133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 10/21/2022] [Indexed: 11/16/2022]
Abstract
We consider an overdamped run-and-tumble particle in two dimensions, with self-propulsion in an orientation that stochastically rotates by 90^{∘} at a constant rate, clockwise or counterclockwise with equal probabilities. In addition, the particle is confined by an external harmonic potential of stiffness μ, and possibly diffuses. We find the exact time-dependent distribution P(x,y,t) of the particle's position, and in particular, the steady-state distribution P_{st}(x,y) that is reached in the long-time limit. We also find P(x,y,t) for a "free" particle, μ=0. We achieve this by showing that, under a proper change of coordinates, the problem decomposes into two statistically independent one-dimensional problems, whose exact solution has recently been obtained. We then extend these results in several directions, to two such run-and-tumble particles with a harmonic interaction, to analogous systems of dimension three or higher, and by allowing stochastic resetting.
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Affiliation(s)
- Naftali R Smith
- Department of Solar Energy and Environmental Physics, Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus 8499000, Israel
| | - Pierre Le Doussal
- Laboratoire de Physique de l'Ecole Normale Supérieure, CNRS, ENS and Université PSL, Sorbonne Université, Université de Paris, 75005 Paris, France
| | | | - Grégory Schehr
- Sorbonne Université, Laboratoire de Physique Théorique et Hautes Energies, CNRS UMR 7589, 4 Place Jussieu, 75252 Paris Cedex 05, France
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15
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Jose S, Mandal D, Barma M, Ramola K. Active random walks in one and two dimensions. Phys Rev E 2022; 105:064103. [PMID: 35854533 DOI: 10.1103/physreve.105.064103] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 04/18/2022] [Indexed: 06/15/2023]
Abstract
We investigate active lattice walks: biased continuous time random walks which perform orientational diffusion between lattice directions in one and two spatial dimensions. We study the occupation probability of an arbitrary site on the lattice in one and two dimensions and derive exact results in the continuum limit. Next, we compute the large deviation free-energy function in both one and two dimensions, which we use to compute the moments and the cumulants of the displacements exactly at late times. Our exact results demonstrate that the cross-correlations between the motion in the x and y directions in two dimensions persist in the large deviation function. We also demonstrate that the large deviation function of an active particle with diffusion displays two regimes, with differing diffusive behaviors. We verify our analytic results with kinetic Monte Carlo simulations of an active lattice walker in one and two dimensions.
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Affiliation(s)
- Stephy Jose
- TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, India
| | - Dipanjan Mandal
- TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, India
| | - Mustansir Barma
- TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, India
| | - Kabir Ramola
- TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, India
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16
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Shee A, Chaudhuri D. Self-propulsion with speed and orientation fluctuation: Exact computation of moments and dynamical bistabilities in displacement. Phys Rev E 2022; 105:054148. [PMID: 35706212 DOI: 10.1103/physreve.105.054148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Accepted: 05/02/2022] [Indexed: 06/15/2023]
Abstract
We consider the influence of active speed fluctuations on the dynamics of a d-dimensional active Brownian particle performing a persistent stochastic motion. The speed fluctuation brings about a dynamical anisotropy even in the absence of shape anisotropy. We use the Laplace transform of the Fokker-Planck equation to obtain exact expressions for time-dependent dynamical moments. Our results agree with direct numerical simulations and show several dynamical crossovers determined by the activity, persistence, and speed fluctuation. The dynamical anisotropy leads to a subdiffusive scaling in the parallel component of displacement fluctuation at intermediate times. The kurtosis remains positive at short times determined by the speed fluctuation, crossing over to a negative minimum at intermediate times governed by the persistence before vanishing asymptotically. The probability distribution of particle displacement obtained from numerical simulations in two dimensions shows two crossovers between compact and extended trajectories via two bimodal distributions at intervening times. While the speed fluctuation dominates the first crossover, the second crossover is controlled by persistence like in the wormlike chain model of semiflexible polymers.
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Affiliation(s)
- Amir Shee
- Institute of Physics, Sachivalaya Marg, Bhubaneswar 751005, India and Homi Bhaba National Institute, Anushaktinagar, Mumbai 400094, India
| | - Debasish Chaudhuri
- Institute of Physics, Sachivalaya Marg, Bhubaneswar 751005, India and Homi Bhaba National Institute, Anushaktinagar, Mumbai 400094, India
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17
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Dolai P, Krekels S, Maes C. Inducing a bound state between active particles. Phys Rev E 2022; 105:044605. [PMID: 35590579 DOI: 10.1103/physreve.105.044605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Accepted: 03/24/2022] [Indexed: 06/15/2023]
Abstract
We show that two active particles can form a bound state by coupling to a driven nonequilibrium environment. We specifically investigate the case of two mutually noninteracting run-and-tumble probes moving on a ring, each in short-range interaction with driven colloids. Under conditions of timescale separation, these active probes become trapped in bound states. In fact, the bound state appears at high enough persistence (low effective temperature). From the perspective of a comoving frame, where colloids are in thermal equilibrium and the probes are active and driven, an appealing analogy appears with Cooper pairing, as electrons can be viewed as run-and-tumble particles in a pilot-wave picture.
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Affiliation(s)
- Pritha Dolai
- Instituut voor Theoretische Fysica, KU Leuven, Celestijnenlaan 200D, 3001 Leuven, Belgium
| | - Simon Krekels
- Instituut voor Theoretische Fysica, KU Leuven, Celestijnenlaan 200D, 3001 Leuven, Belgium
| | - Christian Maes
- Instituut voor Theoretische Fysica, KU Leuven, Celestijnenlaan 200D, 3001 Leuven, Belgium
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18
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Frydel D. Intuitive view of entropy production of ideal run-and-tumble particles. Phys Rev E 2022; 105:034113. [PMID: 35428123 DOI: 10.1103/physreve.105.034113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 02/22/2022] [Indexed: 06/14/2023]
Abstract
This work investigates the entropy production rate, Π, of the run-and-tumble model with a focus on scaling of Π as a function of the persistence time τ. It is determined that (i) Π vanishes in the limit τ→∞, marking it as an equilibrium. Stationary distributions in this limit are represented by a superposition of Boltzmann functions in analogy to a system with quenched disorder. (ii) Optimal Π is attained in the limit τ→0, marking it as a system maximally removed from equilibrium. Paradoxically, the stationary distributions in this limit have the Boltzmann form. The value of Π in this limit is that of an unconfined run-and-tumble particle and is related to the dissipation energy of a sedimenting particle. In addition to these general conclusions, this work derives an exact expression of Π for the run-and-tumble particles in a harmonic trap.
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Affiliation(s)
- Derek Frydel
- Department of Chemistry, Universidad Técnica Federico Santa María, Campus San Joaquin, Santiago 7820275, Chile
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19
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Le Doussal P, Majumdar SN, Schehr G. Stationary nonequilibrium bound state of a pair of run and tumble particles. Phys Rev E 2021; 104:044103. [PMID: 34781527 DOI: 10.1103/physreve.104.044103] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 09/09/2021] [Indexed: 11/07/2022]
Abstract
We study two interacting identical run-and-tumble particles (RTPs) in one dimension. Each particle is driven by a telegraphic noise and, in some cases, also subjected to a thermal white noise with a corresponding diffusion constant D. We are interested in the stationary bound state formed by the two RTPs in the presence of a mutual attractive interaction. The distribution of the relative coordinate y indeed reaches a steady state that we characterize in terms of the solution of a second-order differential equation. We obtain the explicit formula for the stationary probability P(y) of y for two examples of interaction potential V(y). The first one corresponds to V(y)∼|y|. In this case, for D=0 we find that P(y) contains a δ function part at y=0, signaling a strong clustering effect, together with a smooth exponential component. For D>0, the δ function part broadens, leading instead to weak clustering. The second example is the harmonic attraction V(y)∼y^{2} in which case, for D=0, P(y) is supported on a finite interval. We unveil an interesting relation between this two-RTP model with harmonic attraction and a three-state single-RTP model in one dimension, as well as with a four-state single-RTP model in two dimensions. We also provide a general discussion of the stationary bound state, including examples where it is not unique, e.g., when the particles cannot cross due to an additional short-range repulsion.
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Affiliation(s)
- Pierre Le Doussal
- CNRS-Laboratoire de Physique Théorique de l'Ecole Normale Supérieure, 24 rue Lhomond, 75231 Paris Cedex, France
| | | | - Grégory Schehr
- Sorbonne Université, Laboratoire de Physique Théorique et Hautes Energies, CNRS UMR 7589, 4 Place Jussieu, 75252 Paris Cedex 05, France
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20
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Santra I, Basu U, Sabhapandit S. Direction reversing active Brownian particle in a harmonic potential. SOFT MATTER 2021; 17:10108-10119. [PMID: 34726222 DOI: 10.1039/d1sm01118a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
We study the two-dimensional motion of an active Brownian particle of speed v0, with intermittent directional reversals in the presence of a harmonic trap of strength μ. The presence of the trap ensures that the position of the particle eventually reaches a steady state where it is bounded within a circular region of radius v0/μ, centered at the minimum of the trap. Due to the interplay between the rotational diffusion constant DR, reversal rate γ, and the trap strength μ, the steady state distribution shows four different types of shapes, which we refer to as active-I & II, and passive-I & II phases. In the active-I phase, the weight of the distribution is concentrated along an annular region close to the circular boundary, whereas in active-II, an additional central diverging peak appears giving rise to a Mexican hat-like shape of the distribution. The passive-I is marked by a single Boltzmann-like centrally peaked distribution in the large DR limit. On the other hand, while the passive-II phase also shows a single central peak, it is distinguished from passive-I by a non-Boltzmann like divergence near the origin. We characterize these phases by calculating the exact analytical forms of the distributions in various limiting cases. In particular, we show that for DR ≪ γ, the shape transition of the two-dimensional position distribution from active-II to passive-II occurs at μ = γ. We compliment these analytical results with numerical simulations beyond the limiting cases and obtain a qualitative phase diagram in the (DR, γ, μ-1) space.
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Affiliation(s)
- Ion Santra
- Raman Research Institute, Bengaluru 560080, India
| | - Urna Basu
- Raman Research Institute, Bengaluru 560080, India
- S. N. Bose National Centre for Basic Sciences, Kolkata 700106, India
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21
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Frydel D. Kuramoto model with run-and-tumble dynamics. Phys Rev E 2021; 104:024203. [PMID: 34525604 DOI: 10.1103/physreve.104.024203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 07/16/2021] [Indexed: 06/13/2023]
Abstract
This work considers an extension of the Kuramoto model with run-and-tumble dynamics-a type of self-propelled motion. The difference between the extended and the original model is that in the extended version angular velocity of individual particles is no longer fixed but can change sporadically with a new velocity drawn from a distribution g(ω). Because the Kuramoto model undergoes phase transition, it offers a simple case study for investigating phase transition for a system with self-propelled particles.
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Affiliation(s)
- Derek Frydel
- Department of Chemistry, Universidad Técnica Federico Santa María, Campus San Joaquin, Santiago, Chile
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22
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Mori F, Le Doussal P, Majumdar SN, Schehr G. Condensation transition in the late-time position of a run-and-tumble particle. Phys Rev E 2021; 103:062134. [PMID: 34271704 DOI: 10.1103/physreve.103.062134] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 05/25/2021] [Indexed: 11/07/2022]
Abstract
We study the position distribution P(R[over ⃗],N) of a run-and-tumble particle (RTP) in arbitrary dimension d, after N runs. We assume that the constant speed v>0 of the particle during each running phase is independently drawn from a probability distribution W(v) and that the direction of the particle is chosen isotropically after each tumbling. The position distribution is clearly isotropic, P(R[over ⃗],N)→P(R,N) where R=|R[over ⃗]|. We show that, under certain conditions on d and W(v) and for large N, a condensation transition occurs at some critical value of R=R_{c}∼O(N) located in the large-deviation regime of P(R,N). For R<R_{c} (subcritical fluid phase), all runs are roughly of the same size in a typical trajectory. In contrast, an RTP trajectory with R>R_{c} is typically dominated by a "condensate," i.e., a large single run that subsumes a finite fraction of the total displacement (supercritical condensed phase). Focusing on the family of speed distributions W(v)=α(1-v/v_{0})^{α-1}/v_{0}, parametrized by α>0, we show that, for large N, P(R,N)∼exp[-Nψ_{d,α}(R/N)], and we compute exactly the rate function ψ_{d,α}(z) for any d and α. We show that the transition manifests itself as a singularity of this rate function at R=R_{c} and that its order depends continuously on d and α. We also compute the distribution of the condensate size for R>R_{c}. Finally, we study the model when the total duration T of the RTP, instead of the total number of runs, is fixed. Our analytical predictions are confirmed by numerical simulations, performed using a constrained Markov chain Monte Carlo technique, with precision ∼10^{-100}.
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Affiliation(s)
- Francesco Mori
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Pierre Le Doussal
- Laboratoire de Physique de l'Ecole Normale Supérieure, PSL University, CNRS, Sorbonne Universités, 24 rue Lhomond, 75231 Paris, France
| | - Satya N Majumdar
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Grégory Schehr
- Sorbonne Université, Laboratoire de Physique Théorique et Hautes Energies, CNRS, UMR 7589, 4 Place Jussieu, 75252 Paris Cedex 05, France
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23
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Santra I, Basu U, Sabhapandit S. Active Brownian motion with directional reversals. Phys Rev E 2021; 104:L012601. [PMID: 34412243 DOI: 10.1103/physreve.104.l012601] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Accepted: 06/21/2021] [Indexed: 06/13/2023]
Abstract
Active Brownian motion with intermittent direction reversals is common in bacteria like Myxococcus xanthus and Pseudomonas putida. We show that, for such a motion in two dimensions, the presence of the two timescales set by the rotational diffusion constant D_{R} and the reversal rate γ gives rise to four distinct dynamical regimes: (I) t≪min(γ^{-1},D_{R}^{-1}), (II) γ^{-1}≪t≪D_{R}^{-1}, (III) D_{R}^{-1}≪t≪γ^{-1}, and (IV) t≫max(γ^{-1}, D_{R}^{-1}), showing distinct behaviors. We characterize these behaviors by analytically computing the position distribution and persistence exponents. The position distribution shows a crossover from a strongly nondiffusive and anisotropic behavior at short times to a diffusive isotropic behavior via an intermediate regime, II or III. In regime II, we show that, the position distribution along the direction orthogonal to the initial orientation is a function of the scaled variable z∝x_{⊥}/t with a nontrivial scaling function, f(z)=(2π^{3})^{-1/2}Γ(1/4+iz)Γ(1/4-iz). Furthermore, by computing the exact first-passage time distribution, we show that a persistence exponent α=1 emerges due to the direction reversal in this regime.
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Affiliation(s)
- Ion Santra
- Raman Research Institute, Bengaluru 560080, India
| | - Urna Basu
- Raman Research Institute, Bengaluru 560080, India
- S. N. Bose National Centre for Basic Sciences, Kolkata 700106, India
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24
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Singh P, Kundu A. Local time for run and tumble particle. Phys Rev E 2021; 103:042119. [PMID: 34005947 DOI: 10.1103/physreve.103.042119] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Accepted: 03/03/2021] [Indexed: 11/07/2022]
Abstract
We investigate the local time T_{loc} statistics for a run and tumble particle (RTP) in one dimension, which is the quintessential model for the motion of bacteria. In random walk literature, the RTP dynamics is studied as the persistent Brownian motion. We consider the inhomogeneous version of this model where the inhomogeneity is introduced by considering the position-dependent rate of the form R(x)=γ|x|^{α}/l^{α} with α≥0. For α=0, we derive the probability distribution of T_{loc} exactly, which is expressed as a series of δ functions in which the coefficients can be interpreted as the probability of multiple revisits of the RTP to the origin starting from the origin. For general α, we show that the typical fluctuations of T_{loc} scale with time as T_{loc}∼t^{1+α/2+α} for large t and their probability distribution possesses a scaling behavior described by a scaling function which we have computed analytically. Second, we study the statistics of T_{loc} until the RTP makes a first passage to x=M(>0). In this case, we also show that the probability distribution can be expressed as a series sum of δ functions for all values of α(≥0) with coefficients originating from appropriate exit problems. All our analytical findings are supported with numerical simulations.
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Affiliation(s)
- Prashant Singh
- International Centre for Theoretical Sciences, Tata Institute of Fundamental Research, Bengaluru 560089, India
| | - Anupam Kundu
- International Centre for Theoretical Sciences, Tata Institute of Fundamental Research, Bengaluru 560089, India
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25
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Dean DS, Majumdar SN, Schawe H. Position distribution in a generalized run-and-tumble process. Phys Rev E 2021; 103:012130. [PMID: 33601582 DOI: 10.1103/physreve.103.012130] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
We study a class of stochastic processes of the type d^{n}x/dt^{n}=v_{0}σ(t) where n>0 is a positive integer and σ(t)=±1 represents an active telegraphic noise that flips from one state to the other with a constant rate γ. For n=1, it reduces to the standard run-and-tumble process for active particles in one dimension. This process can be analytically continued to any n>0, including noninteger values. We compute exactly the mean-squared displacement at time t for all n>0 and show that at late times while it grows as ∼t^{2n-1} for n>1/2, it approaches a constant for n<1/2. In the marginal case n=1/2, it grows very slowly with time as ∼lnt. Thus, the process undergoes a localization transition at n=1/2. We also show that the position distribution p_{n}(x,t) remains time-dependent even at late times for n≥1/2, but approaches a stationary time-independent form for n<1/2. The tails of the position distribution at late times exhibit a large deviation form, p_{n}(x,t)∼exp[-γtΦ_{n}(x/x^{*}(t))], where x^{*}(t)=v_{0}t^{n}/Γ(n+1). We compute the rate function Φ_{n}(z) analytically for all n>0 and also numerically using importance sampling methods, finding excellent agreement between them. For three special values n=1, n=2, and n=1/2 we compute the exact cumulant-generating function of the position distribution at all times t.
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Affiliation(s)
- David S Dean
- Univ. Bordeaux and CNRS, Laboratoire Ondes et Matière d'Aquitaine (LOMA), UMR 5798, F-33400 Talence, France
| | - Satya N Majumdar
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Hendrik Schawe
- LPTM, UMR 8089, CY Cergy Paris Université, CNRS, 95000 Cergy, France
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26
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Kumar V, Sadekar O, Basu U. Active Brownian motion in two dimensions under stochastic resetting. Phys Rev E 2020; 102:052129. [PMID: 33327209 DOI: 10.1103/physreve.102.052129] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 10/30/2020] [Indexed: 06/12/2023]
Abstract
We study the position distribution of an active Brownian particle (ABP) in the presence of stochastic resetting in two spatial dimensions. We consider three different resetting protocols: (1) where both position and orientation of the particle are reset, (2) where only the position is reset, and (3) where only the orientation is reset with a certain rate r. We show that in the first two cases, the ABP reaches a stationary state. Using a renewal approach, we calculate exactly the stationary marginal position distributions in the limiting cases when the resetting rate r is much larger or much smaller than the rotational diffusion constant D_{R} of the ABP. We find that, in some cases, for a large resetting rate, the position distribution diverges near the resetting point; the nature of the divergence depends on the specific protocol. For the orientation resetting, there is no stationary state, but the motion changes from a ballistic one at short times to a diffusive one at late times. We characterize the short-time non-Gaussian marginal position distributions using a perturbative approach.
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Affiliation(s)
- Vijay Kumar
- Centre for Computational and Data-Intensive Science and Engineering, Skolkovo Institute of Science and Technology, Nobelya Ulitsa 3, Moscow, 121205, Russia
| | - Onkar Sadekar
- Indian Institute of Science Education and Research, Homi Bhabha Road, Pashan, Pune 411008, India
| | - Urna Basu
- Raman Research Institute, C. V. Raman Avenue, Bengaluru 560080, India
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27
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Mori F, Le Doussal P, Majumdar SN, Schehr G. Universal properties of a run-and-tumble particle in arbitrary dimension. Phys Rev E 2020; 102:042133. [PMID: 33212668 DOI: 10.1103/physreve.102.042133] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 08/18/2020] [Indexed: 06/11/2023]
Abstract
We consider an active run-and-tumble particle (RTP) in d dimensions, starting from the origin and evolving over a time interval [0,t]. We examine three different models for the dynamics of the RTP: the standard RTP model with instantaneous tumblings, a variant with instantaneous runs and a general model in which both the tumblings and the runs are noninstantaneous. For each of these models, we use the Sparre Andersen theorem for discrete-time random walks to compute exactly the probability that the x component does not change sign up to time t, showing that it does not depend on d. As a consequence of this result, we compute exactly other x-component properties, namely, the distribution of the time of the maximum and the record statistics, showing that they are universal, i.e., they do not depend on d. Moreover, we show that these universal results hold also if the speed v of the particle after each tumbling is random, drawn from a generic probability distribution. Our findings are confirmed by numerical simulations. Some of these results have been announced in a recent Letter [Phys. Rev. Lett. 124, 090603 (2020)10.1103/PhysRevLett.124.090603].
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Affiliation(s)
- Francesco Mori
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Pierre Le Doussal
- Laboratoire de Physique de l'Ecole Normale Supérieure, PSL University, CNRS, Sorbonne Universités, 24 rue Lhomond, 75231 Paris, France
| | - Satya N Majumdar
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
| | - Grégory Schehr
- LPTMS, CNRS, Univ. Paris-Sud, Université Paris-Saclay, 91405 Orsay, France
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