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Vinoth S, Kingston SL, Srinivasan S, Kumarasamy S, Kapitaniak T. Extreme events in gene regulatory networks with time-delays. Sci Rep 2025; 15:13064. [PMID: 40240448 PMCID: PMC12003715 DOI: 10.1038/s41598-025-97268-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Accepted: 04/03/2025] [Indexed: 04/18/2025] Open
Abstract
This work explores distinct complex dynamics of simplified two nodes of coupled gene regulatory networks with multiple delays in two self-inhibitory and mutually activated genes. We have identified the emergence of extreme events within a specific range of system parameter values. A detailed analysis of the time delay-induced emergence of extreme events is illustrated using bifurcation analysis, two-parameter phase diagrams, return maps, temporal plots, and probability density functions. The reasons behind the advent of extreme events are discussed in detail, with possible analogies to simplified two nodes of gene regulatory networks. The occasional large-amplitude bursting originated in the system via interior crisis-induced intermittency, Pomeau-Manneville intermittency, and the breakdown of quasiperiodic intermittency routes. Additionally, we have used various recurrence quantification statistical measures, such as mean recurrence time, determinism, and recurrence time entropy, to describe the transition from periodic or chaotic to unforeseen large deviations. Our approach shows that the sudden surge of variance and mean recurrence time at the transition points can be used as a new metric to detect the critical transitions of distinct extreme bursting events. The comprehensive overview of the interaction between gene regulatory networks, with insights into the formation of unusual dynamics, is beneficial to grasping different neuronal diseases.
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Affiliation(s)
- S Vinoth
- Center for Nonlinear and Complex Networks, SRM Institute of Science and Technology, Ramapuram, Chennai, 600 089, India
- Center for Research, SRM TRP Engineering College, Tiruchirappalli, Tamil Nadu, India
| | - S Leo Kingston
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924, Lodz, Poland.
| | - Sabarathinam Srinivasan
- Department of Molecular Analytics, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences (SIMATS), Chennai, Tamilnadu, India
| | - Suresh Kumarasamy
- Centre for Artificial Intelligence, Easwari Engineering College, Chennai, 600 089, India.
- Center for Cognitive Science, Trichy SRM Medical College Hospital and Research Center, Trichy, India.
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924, Lodz, Poland
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Ramírez-Ávila GM, Muni SS, Kapitaniak T. Unfolding the distribution of periodicity regions and diversity of chaotic attractors in the Chialvo neuron map. CHAOS (WOODBURY, N.Y.) 2024; 34:083134. [PMID: 39177959 DOI: 10.1063/5.0214903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Accepted: 08/07/2024] [Indexed: 08/24/2024]
Abstract
We performed an exhaustive numerical analysis of the two-dimensional Chialvo map by obtaining the parameter planes based on the computation of periodicities and Lyapunov exponents. Our results allowed us to determine the different regions of dynamical behavior, identify regularities in the distribution of periodicities in regions indicating regular behavior, find some pseudofractal structures, identify regions such as the "eyes of chaos" similar to those obtained in parameter planes of continuous systems, and, finally, characterize the statistical properties of chaotic attractors leading to possible hyperchaotic behavior.
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Affiliation(s)
- Gonzalo Marcelo Ramírez-Ávila
- Namur Institute for Complex Systems (naXys), Université de Namur, Rue de Bruxelles 61, B-5000 Namur, Belgium
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
- Instituto de Investigaciones Fisicas, and Planetario Max Schreier, Universidad Mayor de San Andres, Campus Universitario, C. 27 s/n Cota-Cota, 0000 La Paz, Bolivia
| | - Sishu Shankar Muni
- School of Digital Sciences, Digital University Kerala, Technopark Phase IV, Thiruvananthapuram, Kerala 695317, India
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
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Leo Kingston S, Kumaran G, Ghosh A, Kumarasamy S, Kapitaniak T. Impact of time varying interaction: Formation and annihilation of extreme events in dynamical systems. CHAOS (WOODBURY, N.Y.) 2023; 33:123134. [PMID: 38154041 DOI: 10.1063/5.0174366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Accepted: 11/30/2023] [Indexed: 12/30/2023]
Abstract
This study investigates the emergence of extreme events in two different coupled systems: the FitzHugh-Nagumo neuron model and the forced Liénard system, both based on time-varying interactions. The time-varying coupling function between the systems determines the duration and frequency of their interaction. Extreme events in the coupled system arise as a result of the influence of time-varying interactions within various parameter regions. We specifically focus on elucidating how the transition point between extreme events and regular events shifts in response to the duration of interaction time between the systems. By selecting the appropriate interaction time, we can effectively mitigate extreme events, which is highly advantageous for controlling undesired fluctuations in engineering applications. Furthermore, we extend our investigation to networks of oscillators, where the interactions among network elements are also time dependent. The proposed approach for coupled systems holds wide applicability to oscillator networks.
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Affiliation(s)
- S Leo Kingston
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
| | - Gayathri Kumaran
- Department of Electronics and Communication Engineering, Chennai Institute of Technology, Chennai 600069, Tamil Nadu, India
| | - Anupam Ghosh
- Department of Complex Systems, Institute of Computer Science, Czech Academy of Sciences, Prague 18207, Czech Republic
| | - Suresh Kumarasamy
- Centre for Computational Modeling, Chennai Institute of Technology, Chennai 600069, Tamil Nadu, India
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
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Kingston SL, Kumarasamy S, Balcerzak M, Kapitaniak T. Different routes to large-intensity pulses in Zeeman laser model. OPTICS EXPRESS 2023; 31:22817-22836. [PMID: 37475384 DOI: 10.1364/oe.487442] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 05/25/2023] [Indexed: 07/22/2023]
Abstract
In this study, we report a rich variety of large-intensity pulses exhibited by a Zeeman laser model. The instabilities in the system occur via three different dynamical processes, such as quasiperiodic intermittency, Pomeau-Manneville intermittency, and the breakdown of quasiperiodic motion to chaos followed by an interior crisis. This Zeeman laser model is more capable of exploring the major possible types of instabilities when changing a specific system's parameter in a particular range. We exemplified distinct dynamical transitions of the Zeeman laser model. The statistical measures reveal the appearance of the low probability of large-intensity pulses above the qualifier threshold value. Moreover, they seem to follow an exponential decay that shows a Poisson-like distribution. The impact of noise and time delay effects have been analyzed near the transition point of the system.
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Leo Kingston S, Balcerzak M, Dana SK, Kapitaniak T. Transition to hyperchaos and rare large-intensity pulses in Zeeman laser. CHAOS (WOODBURY, N.Y.) 2023; 33:023128. [PMID: 36859208 DOI: 10.1063/5.0135228] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Accepted: 01/06/2023] [Indexed: 06/18/2023]
Abstract
A discontinuous transition to hyperchaos is observed at discrete critical parameters in the Zeeman laser model for three well known nonlinear sources of instabilities, namely, quasiperiodic breakdown to chaos followed by interior crisis, quasiperiodic intermittency, and Pomeau-Manneville intermittency. Hyperchaos appears with a sudden expansion of the attractor of the system at a critical parameter for each case and it coincides with triggering of occasional and recurrent large-intensity pulses. The transition to hyperchaos from a periodic orbit via Pomeau-Manneville intermittency shows hysteresis at the critical point, while no hysteresis is recorded during the other two processes. The recurrent large-intensity pulses show characteristic features of extremes with their height larger than a threshold and the probability of a rare occurrence. The phenomenon is robust to weak noise although the critical parameter of transition to hyperchaos shifts with noise strength. This phenomenon appears as common in many low dimensional systems as reported earlier by Chowdhury et al. [Phys. Rep. 966, 1-52 (2022)], there the emergent large-intensity events or extreme events dynamics have been recognized simply as chaotic in nature although the temporal dynamics shows occasional large deviations from the original chaotic state in many examples. We need a new metric, in the future, that would be able to classify such significantly different dynamics and distinguish from chaos.
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Affiliation(s)
- S Leo Kingston
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Marek Balcerzak
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Syamal K Dana
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
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Kaviya B, Gopal R, Suresh R, Chandrasekar VK. Route to extreme events in a parametrically driven position-dependent nonlinear oscillator. EUROPEAN PHYSICAL JOURNAL PLUS 2023; 138:36. [PMID: 36686497 PMCID: PMC9842500 DOI: 10.1140/epjp/s13360-022-03625-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 12/22/2022] [Indexed: 06/14/2023]
Abstract
We explore the dynamics of a damped and driven Mathews-Lakshmanan oscillator type model with position-dependent mass term and report two distinct bifurcation routes to the advent of sudden, intermittent large-amplitude chaotic oscillations in the system. We characterize these infrequent and recurrent large oscillations as extreme events (EE) when they are significantly greater than the pre-defined threshold height. In the first bifurcation route, the system exhibits a bifurcation from quasiperiodic (QP) attractor to chaotic attractor via strange non-chaotic (SNA) attractor as a function of damping parameter. In the second route, the chaotic attractor in the form of EE has emerged directly from the QP attractor. Hence, to the best of our knowledge, this is the first study to report the birth of EE from these two distinct bifurcation routes. We also discuss that EE are emerged due to the sudden expansion of the chaotic attractor via interior crisis in the system. Regions of different dynamical states are distinguished using the Lyapunov exponent spectrum. Further, SNA and QP dynamics are determined using the singular spectrum analysis and 0-1 test. The region of EE is characterized using the threshold height.
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Affiliation(s)
- B. Kaviya
- Department of Physics, Centre for Nonlinear Science and Engineering, School of Electrical and Electronics Engineering, SASTRA Deemed University, Thanjavur, 613 401 India
| | - R. Gopal
- Department of Physics, Centre for Nonlinear Science and Engineering, School of Electrical and Electronics Engineering, SASTRA Deemed University, Thanjavur, 613 401 India
| | - R. Suresh
- Department of Physics, Centre for Nonlinear Science and Engineering, School of Electrical and Electronics Engineering, SASTRA Deemed University, Thanjavur, 613 401 India
| | - V. K. Chandrasekar
- Department of Physics, Centre for Nonlinear Science and Engineering, School of Electrical and Electronics Engineering, SASTRA Deemed University, Thanjavur, 613 401 India
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Dudkowski D, Jaros P, Kapitaniak T. Extreme transient dynamics. CHAOS (WOODBURY, N.Y.) 2022; 32:121101. [PMID: 36587356 DOI: 10.1063/5.0131768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Accepted: 11/14/2022] [Indexed: 06/17/2023]
Abstract
We study the extreme transient dynamics of four self-excited pendula coupled via the movable beam. A slight difference in the pendula lengths induces the appearance of traveling phase behavior, within which the oscillators synchronize, but the phases between the nodes change in time. We discuss various scenarios of traveling states (involving different pendula) and their properties, comparing them with classical synchronization patterns of phase-locking. The research investigates the problem of transient dynamics preceding the stabilization of the network on a final synchronous attractor, showing that the width of transient windows can become extremely long. The relation between the behavior of the system within the transient regime and its initial conditions is examined and described. Our results include both identical and non-identical pendula masses, showing that the distribution of the latter ones is related to the transients. The research performed in this paper underlines possible transient problems occurring during the analysis of the systems when the slow evolution of the dynamics can be misinterpreted as the final behavior.
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Affiliation(s)
- Dawid Dudkowski
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
| | - Patrycja Jaros
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
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Ray A, Bröhl T, Mishra A, Ghosh S, Ghosh D, Kapitaniak T, Dana SK, Hens C. Extreme events in a complex network: Interplay between degree distribution and repulsive interaction. CHAOS (WOODBURY, N.Y.) 2022; 32:121103. [PMID: 36587354 DOI: 10.1063/5.0128743] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 11/16/2022] [Indexed: 06/17/2023]
Abstract
The role of topological heterogeneity in the origin of extreme events in a network is investigated here. The dynamics of the oscillators associated with the nodes are assumed to be identical and influenced by mean-field repulsive interactions. An interplay of topological heterogeneity and the repulsive interaction between the dynamical units of the network triggers extreme events in the nodes when each node succumbs to such events for discretely different ranges of repulsive coupling. A high degree node is vulnerable to weaker repulsive interactions, while a low degree node is susceptible to stronger interactions. As a result, the formation of extreme events changes position with increasing strength of repulsive interaction from high to low degree nodes. Extreme events at any node are identified with the appearance of occasional large-amplitude events (amplitude of the temporal dynamics) that are larger than a threshold height and rare in occurrence, which we confirm by estimating the probability distribution of all events. Extreme events appear at any oscillator near the boundary of transition from rotation to libration at a critical value of the repulsive coupling strength. To explore the phenomenon, a paradigmatic second-order phase model is used to represent the dynamics of the oscillator associated with each node. We make an annealed network approximation to reduce our original model and, thereby, confirm the dual role of the repulsive interaction and the degree of a node in the origin of extreme events in any oscillator associated with a node.
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Affiliation(s)
- Arnob Ray
- Physics and Applied Mathematics Unit, Indian Statistical Institute, Kolkata 700108, India
| | - Timo Bröhl
- Department of Epileptology, University Hospital Bonn, Venusberg Campus 1, 53127 Bonn, Germany
| | - Arindam Mishra
- Department of Physics, National University of Singapore, Singapore 117551
| | - Subrata Ghosh
- Center for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Gachibowli, Hyderabad 500032, India
| | - Dibakar Ghosh
- Physics and Applied Mathematics Unit, Indian Statistical Institute, Kolkata 700108, India
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Syamal K Dana
- Department of Mathematics, National Institute of Technology Durgapur, Durgapur 713209, India
| | - Chittaranjan Hens
- Center for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Gachibowli, Hyderabad 500032, India
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Leo Kingston S, Kapitaniak T, Dana SK. Transition to hyperchaos: Sudden expansion of attractor and intermittent large-amplitude events in dynamical systems. CHAOS (WOODBURY, N.Y.) 2022; 32:081106. [PMID: 36049939 DOI: 10.1063/5.0108401] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Accepted: 08/01/2022] [Indexed: 06/15/2023]
Abstract
Hyperchaos is distinguished from chaos by the presence of at least two positive Lyapunov exponents instead of just one in dynamical systems. A general scenario is presented here that shows emergence of hyperchaos with a sudden large expansion of the attractor of continuous dynamical systems at a critical parameter when the temporal dynamics shows intermittent large-amplitude spiking or bursting events. The distribution of local maxima of the temporal dynamics is non-Gaussian with a tail, confirming a rare occurrence of the large-amplitude events. We exemplify our results on the sudden emergence of hyperchaos in three paradigmatic models, namely, a coupled Hindmarsh-Rose model, three coupled Duffing oscillators, and a hyperchaotic model.
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Affiliation(s)
- S Leo Kingston
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
| | - Syamal K Dana
- Division of Dynamics, Lodz University of Technology, 90-924 Lodz, Poland
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