1
|
Karamintziou SD, Custódio AL, Piallat B, Polosan M, Chabardès S, Stathis PG, Tagaris GA, Sakas DE, Polychronaki GE, Tsirogiannis GL, David O, Nikita KS. Algorithmic design of a noise-resistant and efficient closed-loop deep brain stimulation system: A computational approach. PLoS One 2017; 12:e0171458. [PMID: 28222198 PMCID: PMC5319757 DOI: 10.1371/journal.pone.0171458] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Accepted: 01/20/2017] [Indexed: 11/19/2022] Open
Abstract
Advances in the field of closed-loop neuromodulation call for analysis and modeling approaches capable of confronting challenges related to the complex neuronal response to stimulation and the presence of strong internal and measurement noise in neural recordings. Here we elaborate on the algorithmic aspects of a noise-resistant closed-loop subthalamic nucleus deep brain stimulation system for advanced Parkinson’s disease and treatment-refractory obsessive-compulsive disorder, ensuring remarkable performance in terms of both efficiency and selectivity of stimulation, as well as in terms of computational speed. First, we propose an efficient method drawn from dynamical systems theory, for the reliable assessment of significant nonlinear coupling between beta and high-frequency subthalamic neuronal activity, as a biomarker for feedback control. Further, we present a model-based strategy through which optimal parameters of stimulation for minimum energy desynchronizing control of neuronal activity are being identified. The strategy integrates stochastic modeling and derivative-free optimization of neural dynamics based on quadratic modeling. On the basis of numerical simulations, we demonstrate the potential of the presented modeling approach to identify, at a relatively low computational cost, stimulation settings potentially associated with a significantly higher degree of efficiency and selectivity compared with stimulation settings determined post-operatively. Our data reinforce the hypothesis that model-based control strategies are crucial for the design of novel stimulation protocols at the backstage of clinical applications.
Collapse
Affiliation(s)
- Sofia D. Karamintziou
- School of Electrical and Computer Engineering, National Technical University of Athens, Athens, Greece
- Department of Mechanical Engineering, University of California, Riverside, California, United States of America
- * E-mail: (SDK); (KSN)
| | | | - Brigitte Piallat
- Univ. Grenoble Alpes, Grenoble Institut des Neurosciences, GIN, Grenoble, France
- Inserm, U1216, Grenoble, France
| | - Mircea Polosan
- Inserm, U1216, Grenoble, France
- Department of Psychiatry, University Hospital of Grenoble, Grenoble, France
| | - Stéphan Chabardès
- Univ. Grenoble Alpes, Grenoble Institut des Neurosciences, GIN, Grenoble, France
- Inserm, U1216, Grenoble, France
- Department of Neurosurgery, University Hospital of Grenoble, Grenoble, France
| | | | - George A. Tagaris
- Department of Neurology, ‘G. Gennimatas’ General Hospital of Athens, Athens, Greece
| | - Damianos E. Sakas
- Department of Neurosurgery, University of Athens Medical School, ‘Evangelismos’ General Hospital, Athens, Greece
| | - Georgia E. Polychronaki
- School of Electrical and Computer Engineering, National Technical University of Athens, Athens, Greece
| | - George L. Tsirogiannis
- School of Electrical and Computer Engineering, National Technical University of Athens, Athens, Greece
| | - Olivier David
- Univ. Grenoble Alpes, Grenoble Institut des Neurosciences, GIN, Grenoble, France
- Inserm, U1216, Grenoble, France
| | - Konstantina S. Nikita
- School of Electrical and Computer Engineering, National Technical University of Athens, Athens, Greece
- * E-mail: (SDK); (KSN)
| |
Collapse
|
2
|
Karamintziou SD, Deligiannis NG, Piallat B, Polosan M, Chabardès S, David O, Stathis PG, Tagaris GA, Boviatsis EJ, Sakas DE, Polychronaki GE, Tsirogiannis GL, Nikita KS. Dominant efficiency of nonregular patterns of subthalamic nucleus deep brain stimulation for Parkinson’s disease and obsessive-compulsive disorder in a data-driven computational model. J Neural Eng 2015; 13:016013. [DOI: 10.1088/1741-2560/13/1/016013] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
|
3
|
Karamintziou SD, Tsirogiannis GL, Stathis PG, Tagaris GA, Boviatsis EJ, Sakas DE, Nikita KS. Supporting clinical decision making during deep brain stimulation surgery by means of a stochastic dynamical model. J Neural Eng 2014; 11:056019. [DOI: 10.1088/1741-2560/11/5/056019] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
|
4
|
Li D, Li X, Cui D, Li Z. Phase synchronization with harmonic wavelet transform with application to neuronal populations. Neurocomputing 2011. [DOI: 10.1016/j.neucom.2011.05.022] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
5
|
Sun J, Small M. Unified framework for detecting phase synchronization in coupled time series. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 80:046219. [PMID: 19905427 DOI: 10.1103/physreve.80.046219] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2009] [Indexed: 05/28/2023]
Abstract
Phase synchronization (PS) has drawn increasing attention in recent years for its extensive applications in analyzing time series observed from coupled systems. In this paper, we examine the detection of PS in bivariate time series from the viewpoints of signal processing and circular statistics. Several definitions of instantaneous phase (IP) are first revisited and further unified into a framework, which defines IP as the argument of the signal with a specific bandpass filter applied. With this framework, the constraints for IP definition are discussed and the effect of noise in IP estimation is studied. The estimate error of IP, which is due to noise, is shown to obey a scale mixture of normal (SMN) distributions. Further, under the assumption that the SMN of IP error can be approximated by a particular normal distribution, the estimate of mean phase coherence of bivariate time series is shown to be degraded by a factor, which is determined by only the level of in-band noise. Finally, simulations are provided to support the theoretical results.
Collapse
Affiliation(s)
- Junfeng Sun
- Med-X Research Institute, Shanghai Jiao Tong University, Shanghai, China.
| | | |
Collapse
|
6
|
Sun J, Zhang J, Zhou J, Xu X, Small M. Detecting phase synchronization in noisy data from coupled chaotic oscillators. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 77:046213. [PMID: 18517716 DOI: 10.1103/physreve.77.046213] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2007] [Indexed: 05/26/2023]
Abstract
Two schemes are proposed to detect phase synchronization from chaotic data contaminated by noise. The first is a neighborhood-based method which links time delay embedding with instantaneous phase estimation. The second adopts the local projection method as a preprocessing filter to noisy data. Both schemes utilize the state recurrence, an important feature of chaotic data. The proposed schemes are applied to data measured from two typical chaotic systems, i.e., the coupled Rössler systems and the coupled Lorenz systems, respectively. The results show that phase synchronization, which may be buried by noise, is detected even when the noise level is high. Moreover, the overestimation of the degree of phase synchronization, which may be introduced by the Hilbert transform combined with a traditional linear bandpass filter, can be avoided when the data are contaminated by only measurement noise.
Collapse
Affiliation(s)
- Junfeng Sun
- Department of Electronic and Information Engineering, Hong Kong Polytechnic University, Kowloon, Hong Kong, China.
| | | | | | | | | |
Collapse
|
7
|
Gintautas V, Hübler AW. Experimental evidence for mixed reality states in an interreality system. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2007; 75:057201. [PMID: 17677199 DOI: 10.1103/physreve.75.057201] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2006] [Indexed: 05/16/2023]
Abstract
We present experimental data on the limiting behavior of an interreality system comprising a virtual horizontally driven pendulum coupled to its real-world counterpart, where the interaction time scale is much shorter than the time scale of the dynamical system. We present experimental evidence that, if the physical parameters of the simplified virtual system match those of the real system within a certain tolerance, there is a transition from an uncorrelated dual reality state to a mixed reality state of the system in which the motion of the two pendula is highly correlated. The region in parameter space for stable solutions has an Arnold tongue structure for both the experimental data and a numerical simulation. As virtual systems better approximate real ones, even weak coupling in other interreality systems may produce sudden changes to mixed reality states.
Collapse
Affiliation(s)
- Vadas Gintautas
- Center for Complex Systems Research, Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
| | | |
Collapse
|
8
|
Chavez M, Besserve M, Adam C, Martinerie J. Towards a proper estimation of phase synchronization from time series. J Neurosci Methods 2006; 154:149-60. [PMID: 16445988 DOI: 10.1016/j.jneumeth.2005.12.009] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2005] [Revised: 11/25/2005] [Accepted: 12/09/2005] [Indexed: 11/16/2022]
Abstract
In experimental synchronization studies a continuous phase variable is commonly estimated from a scalar time series by means of its representation on the complex plane. The aim is to obtain a pair of functions [A(t), phi(t)] defining its instantaneous amplitude and phase, respectively. However, any arbitrary pair of functions cannot be considered as the amplitude and the phase of the real observable. Here, we point out some criteria that the pair [A(t), phi(t)] must observe to unambiguously define the instantaneous amplitude and phase of the observed signal. In this work, we illustrate how the complex representation may fail if the signal possesses a multi-component or a broadband spectra. We also point out a practical procedure to test whether a signal, not displaying a single oscillation at a unique frequency, has a narrow-band behavior. Implications for the study of phase interdependencies are illustrated and discussed. Phase dynamics estimated from electric brain activities recorded from an epileptic patient are also discussed.
Collapse
Affiliation(s)
- M Chavez
- LENA-CNRS UPR-640, Hôpital de la Salpêtrière, Paris, France.
| | | | | | | |
Collapse
|
9
|
Schelter B, Winterhalder M, Maiwald T, Brandt A, Schad A, Schulze-Bonhage A, Timmer J. Testing statistical significance of multivariate time series analysis techniques for epileptic seizure prediction. CHAOS (WOODBURY, N.Y.) 2006; 16:013108. [PMID: 16599739 DOI: 10.1063/1.2137623] [Citation(s) in RCA: 89] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Nonlinear time series analysis techniques have been proposed to detect changes in the electroencephalography dynamics prior to epileptic seizures. Their applicability in practice to predict seizure onsets is hampered by the present lack of generally accepted standards to assess their performance. We propose an analytic approach to judge the prediction performance of multivariate seizure prediction methods. Statistical tests are introduced to assess patient individual results, taking into account that prediction methods are applied to multiple time series and several seizures. Their performance is illustrated utilizing a bivariate seizure prediction method based on synchronization theory.
Collapse
Affiliation(s)
- Björn Schelter
- FDM, Freiburg Center for Data Analysis and Modeling, University of Freiburg, Eckerstr. 1, 79104 Freiburg, Germany.
| | | | | | | | | | | | | |
Collapse
|
10
|
Rossberg AG, Bartholomé K, Voss HU, Timmer J. Phase synchronization from noisy univariate signals. PHYSICAL REVIEW LETTERS 2004; 93:154103. [PMID: 15524883 DOI: 10.1103/physrevlett.93.154103] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2003] [Indexed: 05/24/2023]
Abstract
We present methods for detecting phase synchronization of two unidirectionally coupled, self-sustained noisy oscillators from a signal of the driven oscillator alone. One method detects soft phase locking; another hard phase locking. Both are applied to the problem of detecting phase synchronization in von Kármán vortex flow meters.
Collapse
Affiliation(s)
- A G Rossberg
- Center for Data Analysis and Modeling, Albert-Ludwigs-Universität Freiburg, Eckerstr. 1, 79104 Freiburg, Germany
| | | | | | | |
Collapse
|