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Geometrical Aspects in the Analysis of Microcanonical Phase-Transitions. ENTROPY 2020; 22:e22040380. [PMID: 33286155 PMCID: PMC7516854 DOI: 10.3390/e22040380] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Revised: 03/18/2020] [Accepted: 03/24/2020] [Indexed: 11/16/2022]
Abstract
In the present work, we discuss how the functional form of thermodynamic observables can be deduced from the geometric properties of subsets of phase space. The geometric quantities taken into account are mainly extrinsic curvatures of the energy level sets of the Hamiltonian of a system under investigation. In particular, it turns out that peculiar behaviours of thermodynamic observables at a phase transition point are rooted in more fundamental changes of the geometry of the energy level sets in phase space. More specifically, we discuss how microcanonical and geometrical descriptions of phase-transitions are shaped in the special case of ϕ 4 models with either nearest-neighbours and mean-field interactions.
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Diagrams of States of Single Flexible-Semiflexible Multi-Block Copolymer Chains: A Flat-Histogram Monte Carlo Study. Polymers (Basel) 2019; 11:polym11050757. [PMID: 31052227 PMCID: PMC6571722 DOI: 10.3390/polym11050757] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Revised: 04/24/2019] [Accepted: 04/26/2019] [Indexed: 01/16/2023] Open
Abstract
The combination of flexibility and semiflexibility in a single molecule is a powerful design principle both in nature and in materials science. We present results on the conformational behavior of a single multiblock-copolymer chain, consisting of equal amounts of Flexible (F) and Semiflexible (S) blocks with different affinity to an implicit solvent. We consider a manifold of macrostates defined by two terms in the total energy: intermonomer interaction energy and stiffness energy. To obtain diagrams of states (pseudo-phase diagrams), we performed flat-histogram Monte Carlo simulations using the Stochastic Approximation Monte Carlo algorithm (SAMC). We have accumulated two-Dimensional Density of States (2D DoS) functions (defined on the 2D manifold of macrostates) for a SF-multiblock-copolymer chain of length N=64 with block lengths b = 4, 8, 16, and 32 in two different selective solvents. In an analysis of the canonical ensemble, we calculated the heat capacity and determined its maxima and the most probable morphologies in different regions of the state diagrams. These are rich in various, non-trivial morphologies, which are formed without any specific interactions, and depend on the block length and the type of solvent selectivity (preferring S or F blocks, respectively). We compared the diagrams with those for the non-selective solvent and reveal essential changes in some cases. Additionally, we implemented microcanonical analysis in the “conformational” microcanonical (NVU, where U is the potential energy) and the true microcanonical (NVE, where E is the total energy) ensembles with the aim to reveal and classify pseudo-phase transitions, occurring under the change of temperature.
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Zablotskiy SV, Ivanov VA, Paul W. Multidimensional stochastic approximation Monte Carlo. Phys Rev E 2016; 93:063303. [PMID: 27415383 DOI: 10.1103/physreve.93.063303] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2016] [Indexed: 06/06/2023]
Abstract
Stochastic Approximation Monte Carlo (SAMC) has been established as a mathematically founded powerful flat-histogram Monte Carlo method, used to determine the density of states, g(E), of a model system. We show here how it can be generalized for the determination of multidimensional probability distributions (or equivalently densities of states) of macroscopic or mesoscopic variables defined on the space of microstates of a statistical mechanical system. This establishes this method as a systematic way for coarse graining a model system, or, in other words, for performing a renormalization group step on a model. We discuss the formulation of the Kadanoff block spin transformation and the coarse-graining procedure for polymer models in this language. We also apply it to a standard case in the literature of two-dimensional densities of states, where two competing energetic effects are present g(E_{1},E_{2}). We show when and why care has to be exercised when obtaining the microcanonical density of states g(E_{1}+E_{2}) from g(E_{1},E_{2}).
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Affiliation(s)
| | - Victor A Ivanov
- Faculty of Physics, Moscow State University, Moscow 119991, Russia
| | - Wolfgang Paul
- Institut für Physik, Martin-Luther-Universität Halle-Wittenberg, 06099 Halle (Saale), Germany
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Hilbert S, Hänggi P, Dunkel J. Thermodynamic laws in isolated systems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:062116. [PMID: 25615053 DOI: 10.1103/physreve.90.062116] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2014] [Indexed: 05/16/2023]
Abstract
The recent experimental realization of exotic matter states in isolated quantum systems and the ensuing controversy about the existence of negative absolute temperatures demand a careful analysis of the conceptual foundations underlying microcanonical thermostatistics. Here we provide a detailed comparison of the most commonly considered microcanonical entropy definitions, focusing specifically on whether they satisfy or violate the zeroth, first, and second laws of thermodynamics. Our analysis shows that, for a broad class of systems that includes all standard classical Hamiltonian systems, only the Gibbs volume entropy fulfills all three laws simultaneously. To avoid ambiguities, the discussion is restricted to exact results and analytically tractable examples.
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Affiliation(s)
- Stefan Hilbert
- Exzellenzcluster Universe, Boltzmannstr. 2, D-85748 Garching, Germany
| | - Peter Hänggi
- Institute of Physics, University of Augsburg, Universitätsstraße 1, D-86135 Augsburg, Germany and Nanosystems Initiative Munich, Schellingstr. 4, D-80799 München, Germany
| | - Jörn Dunkel
- Department of Mathematics, Massachusetts Institute of Technology, 77 Massachusetts Avenue E17-412, Cambridge, Massachusetts 02139-4307, USA
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A new construction for the statistical theory of the nonextensive systems. CHINESE SCIENCE BULLETIN-CHINESE 2014. [DOI: 10.1007/s11434-014-0351-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Bagci GB, Oikonomou T. Tsallis power laws and finite baths with negative heat capacity. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:042126. [PMID: 24229135 DOI: 10.1103/physreve.88.042126] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2013] [Indexed: 06/02/2023]
Abstract
It is often stated that heat baths with finite degrees of freedom i.e., finite baths, are sources of Tsallis distributions for classical Hamiltonian systems. By using well-known fundamental statistical mechanics expressions, we rigorously show that Tsallis distributions with fat tails are possible only for finite baths with constant negative heat capacity, while constant positive heat capacity finite baths yield decays with sharp cutoff with no fat tails. However, the correspondence between Tsallis distributions and finite baths holds at the expense of violating the equipartition theorem for finite classical systems at equilibrium. We comment on the implications of the finite bath for the recent attempts towards a q-generalized central limit theorem.
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Affiliation(s)
- G Baris Bagci
- Department of Physics, Faculty of Science, Ege University, 35100 Izmir, Turkey
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Tang HY, Ma YL. Nonanalyticities of thermodynamic functions in finite noninteracting Bose gases within an exact microcanonical ensemble. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:061135. [PMID: 21797330 DOI: 10.1103/physreve.83.061135] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2011] [Indexed: 05/31/2023]
Abstract
Within an exact microcanonical (MC) ensemble, we study the nonanalyticities of thermodynamic functions research in finite noninteracting Bose gases in traps. The results show that there exists a rich oscillatory behavior of MC thermodynamical quantities as a function of a system's total energy E (e.g., nonmonotonous temperature, nonanalytic and negative specific heats, and microscopic phase transitions). The origin of these nonanalyticities comes directly from the inverted curvature entropy S(E) with respect to E and the behaviors are different in different trap geometries, boundary conditions, and energy spectrum configurations. Contrary to the usual grandcanonical and canonical results, there exists Bose condensation and the nonanalyticities in the two-dimensional finite noninteracting Bose systems with different traps. We also discuss the critical temperature dependence on the particle number N with different ensembles, traps, and boundary conditions. In large enough N, almost all the results of the thermodynamical quantities become smooth, which are similar to the usual canonical behaviors. We emphasize the finite-size effects on the MC entropy change, which should, in principle, be observable in suitably designed experiments of the small systems.
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Affiliation(s)
- Hui-yi Tang
- State Key Laboratory of Surface Physics and Department of Physics, Fudan University, Shanghai, China
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Campisi M, Zueco D, Talkner P. Thermodynamic anomalies in open quantum systems: Strong coupling effects in the isotropic XY model. Chem Phys 2010. [DOI: 10.1016/j.chemphys.2010.04.026] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Campisi M, Talkner P, Hänggi P. Finite bath fluctuation theorem. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2009; 80:031145. [PMID: 19905100 DOI: 10.1103/physreve.80.031145] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2009] [Revised: 07/21/2009] [Indexed: 05/28/2023]
Abstract
We demonstrate that a finite bath fluctuation theorem of the Crooks type holds for systems that have been thermalized via weakly coupling them to a bath with energy independent finite specific heat. We show that this theorem reduces to the known canonical and microcanonical fluctuation theorems in the two respective limiting cases of infinite and vanishing specific heat of the bath. The result is elucidated by applying it to a two-dimensional hard disk colliding elastically with few other hard disks in a rectangular box with perfectly reflecting walls.
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Affiliation(s)
- Michele Campisi
- Institute of Physics, University of Augsburg, Universitätsstrasse 1, D-86153 Augsburg, Germany.
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Chen T, Wang L, Lin X, Liu Y, Liang H. Microcanonical analysis of adsorption of homopolymer chain on a surface. J Chem Phys 2009; 130:244905. [DOI: 10.1063/1.3157255] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Chen T, Lin X, Liu Y, Lu T, Liang H. Microcanonical analyses of homopolymer aggregation processes. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 78:056101. [PMID: 19113184 DOI: 10.1103/physreve.78.056101] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2008] [Indexed: 05/27/2023]
Abstract
Using replica-exchange multicanonical Monte Carlo simulation, the aggregates of two homopolymers were numerically investigated through the microcanonical analysis method. The microcanonical entropy showed one convex function in the transition region, leading to a negative microcanonical specific heat. The origin of temperature backbending was the rearrangement of the segments during the process of aggregation; this aggregation process proceeded via a nucleation and growth mechanism. It was observed that the segments with a sequence number from 10 to 13 in the polymer chain have leading effects on the aggregation.
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Affiliation(s)
- Tao Chen
- Hefei National Laboratory for Physical Sciences at Microscale, Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, People's Republic of China
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Junghans C, Bachmann M, Janke W. Thermodynamics of peptide aggregation processes: an analysis from perspectives of three statistical ensembles. J Chem Phys 2008; 128:085103. [PMID: 18315086 DOI: 10.1063/1.2830233] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We employ a mesoscopic model for studying aggregation processes of proteinlike hydrophobic-polar heteropolymers. By means of multicanonical Monte Carlo computer simulations, we find strong indications that peptide aggregation is a phase separation process, in which the microcanonical entropy exhibits a convex intruder due to non-negligible surface effects of the small systems. We analyze thermodynamic properties of the conformational transitions accompanying the aggregation process from the multicanonical, canonical, and microcanonical perspective. It turns out that the microcanonical description is particularly advantageous as it allows for unraveling details of the phase-separation transition in the thermodynamic region, where the temperature is not a suitable external control parameter anymore.
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Affiliation(s)
- Christoph Junghans
- Institut für Theoretische Physik and Centre for Theoretical Sciences NTZ, Universität Leipzig, Postfach 100920, D-04009 Leipzig, Germany.
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Talkner P, Hänggi P, Morillo M. Microcanonical quantum fluctuation theorems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 77:051131. [PMID: 18643050 DOI: 10.1103/physreve.77.051131] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2008] [Indexed: 05/26/2023]
Abstract
Previously derived expressions for the characteristic function of work performed on a quantum system by a classical external force are generalized to arbitrary initial states of the considered system and to Hamiltonians with degenerate spectra. In the particular case of microcanonical initial states, explicit expressions for the characteristic function and the corresponding probability density of work are formulated. Their classical limit as well as their relations to the corresponding canonical expressions are discussed. A fluctuation theorem is derived that expresses the ratio of probabilities of work for a process and its time reversal to the ratio of densities of states of the microcanonical equilibrium systems with corresponding initial and final Hamiltonians. From this Crooks-type fluctuation theorem a relation between entropies of different systems can be derived which does not involve the time-reversed process. This entropy-from-work theorem provides an experimentally accessible way to measure entropies.
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Affiliation(s)
- Peter Talkner
- Institute of Physics, University of Augsburg, D-86135 Augsburg, Germany
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Chen T, Lin X, Liu Y, Liang H. Microcanonical analysis of association of hydrophobic segments in a heteropolymer. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2007; 76:046110. [PMID: 17995063 DOI: 10.1103/physreve.76.046110] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2007] [Indexed: 05/25/2023]
Abstract
Using the replica-exchange multicanonical Monte Carlo simulation, the intra-association of hydrophobic segments in a heteropolymer was numerically investigated by the microcanonical analysis method. We demonstrated that the microcanonical entropy shows the features of one or multiple convexes in the association transition region depending on the number and distribution of hydrophobic segments in the chain. We found that one or multiple negative specific heats imply a first-order-like transition with the coexistence of multiple phases.
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Affiliation(s)
- Tao Chen
- Department of Polymer Science and Engineering, University of Science and Technology of China, Hefei, Anhui, 230026, People's Republic of China
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17
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Junghans C, Bachmann M, Janke W. Microcanonical analyses of peptide aggregation processes. PHYSICAL REVIEW LETTERS 2006; 97:218103. [PMID: 17155776 DOI: 10.1103/physrevlett.97.218103] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2006] [Indexed: 05/12/2023]
Abstract
We propose the use of microcanonical analyses for numerical studies of peptide aggregation transitions. Performing multicanonical Monte Carlo simulations of a simple hydrophobic-polar continuum model for interacting heteropolymers of finite length, we find that the microcanonical entropy behaves convex in the transition region, leading to a negative microcanonical specific heat. As this effect is also seen in first-order-like transitions of other finite systems, our results provide clear evidence for recent hints that the characterization of phase separation in first-order-like transitions of finite systems profits from this microcanonical view.
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Affiliation(s)
- Christoph Junghans
- Institut für Theoretische Physik and Centre for Theoretical Sciences (NTZ), Universität Leipzig, Augustusplatz 10/11, D-04109 Leipzig, Germany.
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Casetti L, Kastner M. Nonanalyticities of entropy functions of finite and infinite systems. PHYSICAL REVIEW LETTERS 2006; 97:100602. [PMID: 17025801 DOI: 10.1103/physrevlett.97.100602] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2006] [Indexed: 05/12/2023]
Abstract
In contrast to the canonical ensemble where thermodynamic functions are smooth for all finite system sizes, the microcanonical entropy can show nonanalytic points also for finite systems. The relation between finite and infinite system nonanalyticities is illustrated by means of a simple classical spinlike model which is exactly solvable for both finite and infinite system sizes, showing a phase transition in the latter case. The microcanonical entropy is found to have exactly one nonanalytic point in the interior of its domain. For all finite system sizes, this point is located at the same fixed energy value epsilon(c)(finite), jumping discontinuously to a different value epsilon(c)(infinite) in the thermodynamic limit. Remarkably, epsilon(c)(finite) equals the average potential energy of the infinite system at the phase transition point. The result indicates that care is required when trying to infer infinite system properties from finite system nonanalyticities.
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Affiliation(s)
- Lapo Casetti
- Dipartimento di Fisica and Centro per lo Studio delle Dinamiche Complesse (CSDC), Università di Firenze, and Istituto Nazionale di Fisica Nucleare (INFN), sezione di Firenze, via G. Sansone 1, I-50019 Sesto Fiorentino (FI), Italy.
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