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Ye Y, Chaigneau A, Grebenkov DS. First-passage times to a fractal boundary: Local persistence exponent and its log-periodic oscillations. Phys Rev E 2025; 111:014153. [PMID: 39972924 DOI: 10.1103/physreve.111.014153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Accepted: 12/03/2024] [Indexed: 02/21/2025]
Abstract
We investigate the statistics of the first-passage time (FPT) to a fractal self-similar boundary of the Koch snowflake. When the starting position is fixed near the absorbing boundary, the FPT distribution exhibits an apparent power-law decay over a broad range of timescales, culminated by an exponential cutoff. By extensive Monte Carlo simulations, we compute the local persistence exponent of the survival probability and reveal its log-periodic oscillations in time due to self-similarity of the boundary. The effect of the starting point on this behavior is analyzed in depth. Theoretical bounds on the survival probability are derived from the analysis of diffusion in a circular sector. Physical rationales for the refined structure of the survival probability are presented.
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Affiliation(s)
- Yilin Ye
- Ecole Polytechnique, CNRS, Laboratoire de Physique de la Matière Condensée (UMR 7643), - , Institut Polytechnique de Paris, 91120 Palaiseau, France
| | - Adrien Chaigneau
- Ecole Polytechnique, CNRS, Laboratoire de Physique de la Matière Condensée (UMR 7643), - , Institut Polytechnique de Paris, 91120 Palaiseau, France
| | - Denis S Grebenkov
- Ecole Polytechnique, CNRS, Laboratoire de Physique de la Matière Condensée (UMR 7643), - , Institut Polytechnique de Paris, 91120 Palaiseau, France
- Université de Montréal, CNRS, - , CRM - CNRS, 6128 succ Centre-Ville, Montréal QC H3C 3J7, Canada
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2
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Sun X, Li A, Zhu S, Zhu F. Random Walk on T-Fractal with Stochastic Resetting. ENTROPY (BASEL, SWITZERLAND) 2024; 26:1034. [PMID: 39766663 PMCID: PMC11726722 DOI: 10.3390/e26121034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2024] [Revised: 11/22/2024] [Accepted: 11/28/2024] [Indexed: 01/15/2025]
Abstract
In this study, we explore the impact of stochastic resetting on the dynamics of random walks on a T-fractal network. By employing the generating function technique, we establish a recursive relation between the generating function of the first passage time (FPT) and derive the relationship between the mean first passage time (MFPT) with resetting and the generating function of the FPT without resetting. Our analysis covers various scenarios for a random walker reaching a target site from the starting position; for each case, we determine the optimal resetting probability γ* that minimizes the MFPT. We compare the results with the MFPT without resetting and find that the inclusion of resetting significantly enhances the search efficiency, particularly as the size of the network increases. Our findings highlight the potential of stochastic resetting as an effective strategy for the optimization of search processes in complex networks, offering valuable insights for applications in various fields in which efficient search strategies are crucial.
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Affiliation(s)
- Xiaohan Sun
- School of Mathematical Science, Jiangsu University, Zhenjiang 212013, China; (X.S.); (A.L.)
| | - Anlin Li
- School of Mathematical Science, Jiangsu University, Zhenjiang 212013, China; (X.S.); (A.L.)
| | - Shaoxiang Zhu
- School of Mechanical Engineering, Jiangsu University, Zhenjiang 212013, China;
| | - Feng Zhu
- School of Mathematical Science, Jiangsu University, Zhenjiang 212013, China; (X.S.); (A.L.)
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3
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Yuan Z, Peng J, Gao L, Shao R. Fractal and first-passage properties of a class of self-similar networks. CHAOS (WOODBURY, N.Y.) 2024; 34:033134. [PMID: 38526982 DOI: 10.1063/5.0196934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 03/01/2024] [Indexed: 03/27/2024]
Abstract
A class of self-similar networks, obtained by recursively replacing each edge of the current network with a well-designed structure (generator) and known as edge-iteration networks, has garnered considerable attention owing to its role in presenting rich network models to mimic real objects with self-similar structures. The generator dominates the structural and dynamic properties of edge-iteration networks. However, the general relationships between these networks' structural and dynamic properties and their generators remain unclear. We study the fractal and first-passage properties, such as the fractal dimension, walk dimension, resistance exponent, spectral dimension, and global mean first-passage time, which is the mean time for a walker, starting from a randomly selected node and reaching the fixed target node for the first time. We disclose the properties of the generators that dominate the fractal and first-passage properties of general edge-iteration networks. A clear relationship between the fractal and first-passage properties of the edge-iteration networks and the related properties of the generators are presented. The upper and lower bounds of these quantities are also discussed. Thus, networks can be customized to meet the requirements of fractal and dynamic properties by selecting an appropriate generator and tuning their structural parameters. The results obtained here shed light on the design and optimization of network structures.
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Affiliation(s)
- Zhenhua Yuan
- School of Mathematics and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory, Co-sponsored by the Province and City of Information Security Technology, Guangzhou University, Guangzhou 510006, China
- Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou 510006, China
| | - Junhao Peng
- School of Mathematics and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory, Co-sponsored by the Province and City of Information Security Technology, Guangzhou University, Guangzhou 510006, China
- Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou 510006, China
| | - Long Gao
- School of Mathematics and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory, Co-sponsored by the Province and City of Information Security Technology, Guangzhou University, Guangzhou 510006, China
- Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou 510006, China
| | - Renxiang Shao
- School of Mathematics and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory, Co-sponsored by the Province and City of Information Security Technology, Guangzhou University, Guangzhou 510006, China
- Guangzhou Center for Applied Mathematics, Guangzhou University, Guangzhou 510006, China
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4
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Calvani G, Perona P. Splitting probabilities and mean first-passage times across multiple thresholds of jump-and-drift transition paths. Phys Rev E 2023; 108:044105. [PMID: 37978647 DOI: 10.1103/physreve.108.044105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 09/11/2023] [Indexed: 11/19/2023]
Abstract
We apply stochastic-trajectory analysis to derive exact expressions for the mean first-passage times of jump-and-drift transition paths across two or more consecutive thresholds. We perform the analysis of the crossing statistics in terms of dimensionless quantities and show that, for particles starting between two thresholds, such statistics are directly related to the probability of not crossing one threshold and to the splitting probability of crossing the second one. We additionally derive a relationship for the mean first-passage time of the transition paths crossing two consecutive thresholds for particles starting outside them. The results are relevant to several physical and engineering applications including the case of flow discharge in fluvial environments, which is shown.
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Affiliation(s)
- Giulio Calvani
- Platform of Hydraulic Constructions (PL-LCH), IIC, School of Architecture, Civil and Environmental Engineering, EPFL, Lausanne 1015, Switzerland
| | - Paolo Perona
- Platform of Hydraulic Constructions (PL-LCH), IIC, School of Architecture, Civil and Environmental Engineering, EPFL, Lausanne 1015, Switzerland
- School of Engineering, Institute for Infrastructure and Environment, University of Edinburgh, Edinburgh EH9 3FG, United Kingdom
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5
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Gao L, Peng J, Tang C. Mean trapping time for an arbitrary trap site on a class of fractal scale-free trees. Phys Rev E 2022; 105:044201. [PMID: 35590606 DOI: 10.1103/physreve.105.044201] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Accepted: 02/22/2022] [Indexed: 06/15/2023]
Abstract
Fractals are ubiquitous in nature and random walks on fractals have attracted lots of scientific attention in the past several years. In this work, we consider discrete random walks on a class of fractal scale-free trees (FST), whose topologies are controlled by two integer parameters (i.e., u≥2 and v≥1) and exhibit a wide range of topological properties by suitably varying the parameters u and v. The mean trapping time (MTT), referred to as T_{y}, which is the mean time it takes the walker to be absorbed by the trap fixed at site y of the FST, is addressed analytically on the FST, and the effects of the trap location y on the MTT for the FST and for the general trees are also analyzed. First, a method, which is based on the connection between the MTT and the effective resistances, to derive analytically T_{y} for an arbitrary site y of the FST is presented, and some examples are provided to show the effectiveness of the method. Then, we compare T_{y} for all the possible site y of the trees, and find the sites where T_{y} achieves the minimum (or maximum) on the FST. Finally, we analyze the effects of trap location on the MTT in general trees and find that the average path length (APL) from an arbitrary site to the trap is the decisive factor which dominates the difference in the MTTs for different trap locations on general trees. We find, for any tree, the MTT obtains the minimum (or maximum) at sites where the APL achieves the minimum (or maximum).
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Affiliation(s)
- Long Gao
- School of Mathematical and Information Science, Guangzhou University, Guangzhou 510006, China
| | - Junhao Peng
- School of Mathematical and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory co-sponsored by province and city of Information Security Technology, Guangzhou University, Guangzhou 510006, China
| | - Chunming Tang
- School of Mathematical and Information Science, Guangzhou University, Guangzhou 510006, China
- Guangdong Provincial Key Laboratory co-sponsored by province and city of Information Security Technology, Guangzhou University, Guangzhou 510006, China
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6
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Ma F, Wang P. Mean first-passage time for random walks on random growth tree networks. Phys Rev E 2022; 105:014307. [PMID: 35193265 DOI: 10.1103/physreve.105.014307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Accepted: 01/03/2022] [Indexed: 06/14/2023]
Abstract
As opposed to most previous works focusing on random walks on deterministic tree networks, in this paper, we pay more attention on random growth tree networks. Specifically, we propose two distinct types of random growth tree networks T(1;t,p) and T(2;t,p) where t represents time step and p is a probability parameter (0≤p≤1). Tree T(1;t,p) is iteratively built in a fractal manner; however, T(2;t,p) is generated using a nonfractal operation. Then we study random walks on tree network T(i;t,p) (i=1,2) and derive the analytical solution to mean first-passage time 〈F_{T(i;t,p)}〉. The results suggest that two growth ways have remarkably different influence on parameters 〈F_{T(i;t,p)}〉. More precisely, the fractal-growth manner makes topological structure of tree network more loose than the nonfractal one and thus increases drastically mean first-passage time in the large graph limit. Finally, we extensively conduct experimental simulations, and the results demonstrate that computer simulations are in strong agreement with the theoretical analysis.
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Affiliation(s)
- Fei Ma
- School of Electronics Engineering and Computer Science, Peking University, Beijing 100871, China
| | - Ping Wang
- National Engineering Research Center for Software Engineering, Peking University, Beijing 100871, China; School of Software and Microelectronics, Peking University, Beijing 102600, China; and Key Laboratory of High Confidence Software Technologies (PKU), Ministry of Education, Beijing 100871, China
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7
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Impact of global structure on diffusive exploration of organelle networks. Sci Rep 2020; 10:4984. [PMID: 32188905 PMCID: PMC7080787 DOI: 10.1038/s41598-020-61598-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Accepted: 02/25/2020] [Indexed: 01/08/2023] Open
Abstract
We investigate diffusive search on planar networks, motivated by tubular organelle networks in cell biology that contain molecules searching for reaction partners and binding sites. Exact calculation of the diffusive mean first-passage time on a spatial network is used to characterize the typical search time as a function of network connectivity. We find that global structural properties — the total edge length and number of loops — are sufficient to largely determine network exploration times for a variety of both synthetic planar networks and organelle morphologies extracted from living cells. For synthetic networks on a lattice, we predict the search time dependence on these global structural parameters by connecting with percolation theory, providing a bridge from irregular real-world networks to a simpler physical model. The dependence of search time on global network structural properties suggests that network architecture can be designed for efficient search without controlling the precise arrangement of connections. Specifically, increasing the number of loops substantially decreases search times, pointing to a potential physical mechanism for regulating reaction rates within organelle network structures.
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8
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Wu Z, Gao Y. Average trapping time on weighted directed Koch network. Sci Rep 2019; 9:14609. [PMID: 31601956 PMCID: PMC6787032 DOI: 10.1038/s41598-019-51229-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Accepted: 09/26/2019] [Indexed: 11/09/2022] Open
Abstract
Numerous recent studies have focused on random walks on undirected binary scale-free networks. However, random walks with a given target node on weighted directed networks remain less understood. In this paper, we first introduce directed weighted Koch networks, in which any pair of nodes is linked by two edges with opposite directions, and weights of edges are controlled by a parameter θ . Then, to evaluate the transportation efficiency of random walk, we derive an exact solution for the average trapping time (ATT), which agrees well with the corresponding numerical solution. We show that leading behaviour of ATT is function of the weight parameter θ and that the ATT can grow sub-linearly, linearly and super-linearly with varying θ . Finally, we introduce a delay parameter p to modify the transition probability of random walk, and provide a closed-form solution for ATT, which still coincides with numerical solution. We show that in the closed-form solution, the delay parameter p can change the coefficient of ATT, but cannot change the leading behavior. We also show that desired ATT or trapping efficiency can be obtained by setting appropriate weight parameter and delay parameter simultaneously. Thereby, this work advance the understanding of random walks on directed weighted scale-free networks.
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Affiliation(s)
- Zikai Wu
- Business School, University of Shanghai for Science and Technology, Shanghai, 200093, China.
| | - Yu Gao
- Business School, University of Shanghai for Science and Technology, Shanghai, 200093, China
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9
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Balakrishnan V, Abad E, Abil T, Kozak JJ. First-passage properties of mortal random walks: Ballistic behavior, effective reduction of dimensionality, and scaling functions for hierarchical graphs. Phys Rev E 2019; 99:062110. [PMID: 31330722 DOI: 10.1103/physreve.99.062110] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2019] [Indexed: 11/07/2022]
Abstract
We consider a mortal random walker on a family of hierarchical graphs in the presence of some trap sites. The configuration comprising the graph, the starting point of the walk, and the locations of the trap sites is taken to be exactly self-similar as one goes from one generation of the family to the next. Under these circumstances, the total probability that the walker hits a trap is determined exactly as a function of the single-step survival probability q of the mortal walker. On the nth generation graph of the family, this probability is shown to be given by the nth iterate of a certain scaling function or map q→f(q). The properties of the map then determine, in each case, the behavior of the trapping probability, the mean time to trapping, the temporal scaling factor governing the random walk dimension on the graph, and other related properties. The formalism is illustrated for the cases of a linear hierarchical lattice and the Sierpinski graphs in two and three Euclidean dimensions. We find an effective reduction of the random walk dimensionality due to the ballistic behavior of the surviving particles induced by the mortality constraint. The relevance of this finding for experiments involving travel times of particles in diffusion-decay systems is discussed.
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Affiliation(s)
- V Balakrishnan
- Department of Physics, Indian Institute of Technology Madras Chennai 600 036, India
| | - E Abad
- Departamento de Física Aplicada and Instituto de Computación Científica Avanzada (ICCAEx) Centro Universitario de Mérida, Universidad de Extremadura, E-06800 Mérida, Spain
| | - Tim Abil
- College of Computing and Digital Media DePaul University, 243 South Wabash, Chicago, Illinois 60604-2301, USA
| | - John J Kozak
- Department of Chemistry DePaul University, Chicago, Illinois 6604-6116, USA
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10
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Peng J, Xu G, Shao R, Chen L, Stanley HE. Analysis of fluctuations in the first return times of random walks on regular branched networks. J Chem Phys 2018; 149:024903. [PMID: 30007392 DOI: 10.1063/1.5028123] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The first return time (FRT) is the time it takes a random walker to first return to its original site, and the global first passage time (GFPT) is the first passage time for a random walker to move from a randomly selected site to a given site. We find that in finite networks, the variance of FRT, Var(FRT), can be expressed as Var(FRT) = 2⟨FRT⟩⟨GFPT⟩ - ⟨FRT⟩2 - ⟨FRT⟩, where ⟨·⟩ is the mean of the random variable. Therefore a method of calculating the variance of FRT on general finite networks is presented. We then calculate Var(FRT) and analyze the fluctuation of FRT on regular branched networks (i.e., Cayley tree) by using Var(FRT) and its variant as the metric. We find that the results differ from those in such other networks as Sierpinski gaskets, Vicsek fractals, T-graphs, pseudofractal scale-free webs, (u, v) flowers, and fractal and non-fractal scale-free trees.
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Affiliation(s)
- Junhao Peng
- School of Math and Information Science, Guangzhou University, Guangzhou 510006, China
| | - Guoai Xu
- School of Cyberspace Security, Beijing University of Posts and Telecommunications, Beijing 100876, China
| | - Renxiang Shao
- School of Math and Information Science, Guangzhou University, Guangzhou 510006, China
| | - Lin Chen
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA
| | - H Eugene Stanley
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA
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11
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12
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Rocha RP, Figueiredo W, Suweis S, Maritan A. Species survival and scaling laws in hostile and disordered environments. Phys Rev E 2016; 94:042404. [PMID: 27841634 DOI: 10.1103/physreve.94.042404] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2016] [Indexed: 11/07/2022]
Abstract
In this work we study the likelihood of survival of single-species in the context of hostile and disordered environments. Population dynamics in this environment, as modeled by the Fisher equation, is characterized by negative average growth rate, except in some random spatially distributed patches that may support life. In particular, we are interested in the phase diagram of the survival probability and in the critical size problem, i.e., the minimum patch size required for surviving in the long-time dynamics. We propose a measure for the critical patch size as being proportional to the participation ratio of the eigenvector corresponding to the largest eigenvalue of the linearized Fisher dynamics. We obtain the (extinction-survival) phase diagram and the probability distribution function (PDF) of the critical patch sizes for two topologies, namely, the one-dimensional system and the fractal Peano basin. We show that both topologies share the same qualitative features, but the fractal topology requires higher spatial fluctuations to guarantee species survival. We perform a finite-size scaling and we obtain the associated scaling exponents. In addition, we show that the PDF of the critical patch sizes has an universal shape for the 1D case in terms of the model parameters (diffusion, growth rate, etc.). In contrast, the diffusion coefficient has a drastic effect on the PDF of the critical patch sizes of the fractal Peano basin, and it does not obey the same scaling law of the 1D case.
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Affiliation(s)
- Rodrigo P Rocha
- Departamento de Física, Universidade Federal de Santa Catarina, 88040-900, Florianópolis-SC, Brazil.,Dipartimento di Fisica e Astronomia, Università di Padova, CNISM and INFN, via Marzolo 8, I-35131 Padova, Italy
| | - Wagner Figueiredo
- Departamento de Física, Universidade Federal de Santa Catarina, 88040-900, Florianópolis-SC, Brazil
| | - Samir Suweis
- Dipartimento di Fisica e Astronomia, Università di Padova, CNISM and INFN, via Marzolo 8, I-35131 Padova, Italy
| | - Amos Maritan
- Dipartimento di Fisica e Astronomia, Università di Padova, CNISM and INFN, via Marzolo 8, I-35131 Padova, Italy
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13
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Dolgushev M, Liu H, Zhang Z. Extended Vicsek fractals: Laplacian spectra and their applications. Phys Rev E 2016; 94:052501. [PMID: 27967151 DOI: 10.1103/physreve.94.052501] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2016] [Indexed: 06/06/2023]
Abstract
Extended Vicsek fractals (EVF) are the structures constructed by introducing linear spacers into traditional Vicsek fractals. Here we study the Laplacian spectra of the EVF. In particularly, the recurrence relations for the Laplacian spectra allow us to obtain an analytic expression for the sum of all inverse nonvanishing Laplacian eigenvalues. This quantity characterizes the large-scale properties, such as the gyration radius of the polymeric structures, or the global mean-first passage time for the random walk processes. Introduction of the linear spacers leads to local heterogeneities, which reveal themselves, for example, in the dynamics of EVF under external forces.
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Affiliation(s)
- Maxim Dolgushev
- Institute of Physics, University of Freiburg, Hermann-Herder-Strasse 3, D-79104 Freiburg, Germany
- Institut Charles Sadron, Université de Strasbourg and CNRS, 23 rue du Loess, 67034 Strasbourg Cedex, France
| | - Hongxiao Liu
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China
| | - Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China
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14
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Dolgushev M, Markelov DA, Fürstenberg F, Guérin T. Local orientational mobility in regular hyperbranched polymers. Phys Rev E 2016; 94:012502. [PMID: 27575171 DOI: 10.1103/physreve.94.012502] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Indexed: 11/07/2022]
Abstract
We study the dynamics of local bond orientation in regular hyperbranched polymers modeled by Vicsek fractals. The local dynamics is investigated through the temporal autocorrelation functions of single bonds and the corresponding relaxation forms of the complex dielectric susceptibility. We show that the dynamic behavior of single segments depends on their remoteness from the periphery rather than on the size of the whole macromolecule. Remarkably, the dynamics of the core segments (which are most remote from the periphery) shows a scaling behavior that differs from the dynamics obtained after structural average. We analyze the most relevant processes of single segment motion and provide an analytic approximation for the corresponding relaxation times. Furthermore, we describe an iterative method to calculate the orientational dynamics in the case of very large macromolecular sizes.
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Affiliation(s)
- Maxim Dolgushev
- Institute of Physics, University of Freiburg, Hermann-Herder-Strasse 3, 79104 Freiburg, Germany.,Institut Charles Sadron, Université de Strasbourg and CNRS, 23 rue du Loess, 67034 Strasbourg Cedex, France
| | - Denis A Markelov
- St. Petersburg State University, 7/9 Universitetskaya nab., St. Petersburg, 199034, Russia.,St. Petersburg National Research University of Information Technologies, Mechanics and Optics (ITMO University), Kronverkskiy pr. 49, St. Petersburg, 197101, Russia
| | - Florian Fürstenberg
- Institute of Physics, University of Freiburg, Hermann-Herder-Strasse 3, 79104 Freiburg, Germany
| | - Thomas Guérin
- Laboratoire Ondes et Matière d'Aquitaine (LOMA), CNRS UMR 5798, Talence, France
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15
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Mielke J, Dolgushev M. Relaxation Dynamics of Semiflexible Fractal Macromolecules. Polymers (Basel) 2016; 8:polym8070263. [PMID: 30974539 PMCID: PMC6432473 DOI: 10.3390/polym8070263] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2016] [Revised: 06/28/2016] [Accepted: 07/01/2016] [Indexed: 11/21/2022] Open
Abstract
We study the dynamics of semiflexible hyperbranched macromolecules having only dendritic units and no linear spacers, while the structure of these macromolecules is modeled through T-fractals. We construct a full set of eigenmodes of the dynamical matrix, which couples the set of Langevin equations. Based on the ensuing relaxation spectra, we analyze the mechanical relaxation moduli. The fractal character of the macromolecules reveals itself in the storage and loss moduli in the intermediate region of frequencies through scaling, whereas at higher frequencies, we observe the locally-dendritic structure that is more pronounced for higher stiffness.
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Affiliation(s)
- Jonas Mielke
- Institute of Physics, University of Freiburg, Hermann-Herder-Str. 3, 79104 Freiburg, Germany.
| | - Maxim Dolgushev
- Institute of Physics, University of Freiburg, Hermann-Herder-Str. 3, 79104 Freiburg, Germany.
- Institut Charles Sadron, Université de Strasbourg & CNRS, 23 rue du Loess, 67034 Strasbourg Cedex, France.
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16
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Agliari E, Cassi D, Cattivelli L, Sartori F. Two-particle problem in comblike structures. Phys Rev E 2016; 93:052111. [PMID: 27300834 DOI: 10.1103/physreve.93.052111] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2015] [Indexed: 06/06/2023]
Abstract
Encounters between walkers performing a random motion on an appropriate structure can describe a wide variety of natural phenomena ranging from pharmacokinetics to foraging. On homogeneous structures the asymptotic encounter probability between two walkers is (qualitatively) independent of whether both walkers are moving or one is kept fixed. On infinite comblike structures this is no longer the case and here we deepen the mechanisms underlying the emergence of a finite probability that two random walkers will never meet, while one single random walker is certain to visit any site. In particular, we introduce an analytical approach to address this problem and even more general problems such as the case of two walkers with different diffusivity, particles walking on a finite comb and on arbitrary bundled structures, possibly in the presence of loops. Our investigations are both analytical and numerical and highlight that, in general, the outcome of a reaction involving two reactants on a comblike architecture can strongly differ according to whether both reactants are moving (no matter their relative diffusivities) or only one is moving and according to the density of shortcuts among the branches.
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Affiliation(s)
- Elena Agliari
- Dipartimento di Matematica, Sapienza Università di Roma, P. le Aldo Moro 5, 00185 Roma, Italy
| | - Davide Cassi
- Dipartimento di Fisica e Scienze della Terra, Parco Area delle Scienze 7/A, 43124 Parma, Italy
| | - Luca Cattivelli
- Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | - Fabio Sartori
- Max Planck Institute for Brain Research, Max-von-Laue-Straße 4, 60438 Frankfurt am Main, Germany
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17
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Liu H, Lin Y, Dolgushev M, Zhang Z. Dynamics of comb-of-comb networks. Phys Rev E 2016; 93:032502. [PMID: 27078400 DOI: 10.1103/physreve.93.032502] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Indexed: 11/07/2022]
Abstract
The dynamics of complex networks, a current hot topic in many scientific fields, is often coded through the corresponding Laplacian matrix. The spectrum of this matrix carries the main features of the networks' dynamics. Here we consider the deterministic networks which can be viewed as "comb-of-comb" iterative structures. For their Laplacian spectra we find analytical equations involving Chebyshev polynomials whose properties allow one to analyze the spectra in deep. Here, in particular, we find that in the infinite size limit the corresponding spectral dimension goes as d(s) → 2. The d(s) leaves its fingerprint on many dynamical processes, as we exemplarily show by considering the dynamical properties of polymer networks, including single monomer displacement under a constant force, mechanical relaxation, and fluorescence depolarization.
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Affiliation(s)
- Hongxiao Liu
- School of Computer Science, Fudan University, Shanghai 200433, China.,Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China
| | - Yuan Lin
- School of Computer Science, Fudan University, Shanghai 200433, China.,Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China
| | - Maxim Dolgushev
- Institute of Physics, University of Freiburg, Hermann-Herder-Str. 3, D-79104 Freiburg, Germany.,Institut Charles Sadron, Université de Strasbourg and CNRS, 23 rue du Loess, 67034 Strasbourg Cedex, France
| | - Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China.,Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China
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18
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Zhang Z, Li H, Yi Y. Anomalous behavior of trapping in extended dendrimers with a perfect trap. J Chem Phys 2015; 143:064901. [PMID: 26277160 DOI: 10.1063/1.4927473] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Compact and extended dendrimers are two important classes of dendritic polymers. The impact of the underlying structure of compact dendrimers on dynamical processes has been much studied, yet the relation between the dynamical and structural properties of extended dendrimers remains not well understood. In this paper, we study the trapping problem in extended dendrimers with generation-dependent segment lengths, which is different from that of compact dendrimers where the length of the linear segments is fixed. We first consider a particular case that the deep trap is located at the central node, and derive an exact formula for the average trapping time (ATT) defined as the average of the source-to-trap mean first passage time over all starting points. Then, using the obtained result we deduce a closed-form expression for the ATT to an arbitrary trap node, based on which we further obtain an explicit solution to the ATT corresponding to the trapping issue with the trap uniformly distributed in the polymer systems. We show that the trap location has a substantial influence on the trapping efficiency measured by the ATT, which increases with the shortest distance from the trap to the central node, a phenomenon similar to that for compact dendrimers. In contrast to this resemblance, the leading terms of ATTs for the three trapping problems differ drastically between extended and compact dendrimers, with the trapping processes in the extended dendrimers being less efficient than in compact dendrimers.
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Affiliation(s)
- Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
| | - Huan Li
- School of Computer Science, Fudan University, Shanghai 200433, China
| | - Yuhao Yi
- School of Computer Science, Fudan University, Shanghai 200433, China
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19
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Zhang Z, Dong Y, Sheng Y. Mixed random walks with a trap in scale-free networks including nearest-neighbor and next-nearest-neighbor jumps. J Chem Phys 2015; 143:134101. [PMID: 26450286 DOI: 10.1063/1.4931988] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Random walks including non-nearest-neighbor jumps appear in many real situations such as the diffusion of adatoms and have found numerous applications including PageRank search algorithm; however, related theoretical results are much less for this dynamical process. In this paper, we present a study of mixed random walks in a family of fractal scale-free networks, where both nearest-neighbor and next-nearest-neighbor jumps are included. We focus on trapping problem in the network family, which is a particular case of random walks with a perfect trap fixed at the central high-degree node. We derive analytical expressions for the average trapping time (ATT), a quantitative indicator measuring the efficiency of the trapping process, by using two different methods, the results of which are consistent with each other. Furthermore, we analytically determine all the eigenvalues and their multiplicities for the fundamental matrix characterizing the dynamical process. Our results show that although next-nearest-neighbor jumps have no effect on the leading scaling of the trapping efficiency, they can strongly affect the prefactor of ATT, providing insight into better understanding of random-walk process in complex systems.
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Affiliation(s)
- Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
| | - Yuze Dong
- School of Computer Science, Fudan University, Shanghai 200433, China
| | - Yibin Sheng
- School of Computer Science, Fudan University, Shanghai 200433, China
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20
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Peng J, Agliari E, Zhang Z. Exact calculations of first-passage properties on the pseudofractal scale-free web. CHAOS (WOODBURY, N.Y.) 2015; 25:073118. [PMID: 26232969 DOI: 10.1063/1.4927085] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
In this paper, we consider discrete time random walks on the pseudofractal scale-free web (PSFW) and we study analytically the related first passage properties. First, we classify the nodes of the PSFW into different levels and propose a method to derive the generation function of the first passage probability from an arbitrary starting node to the absorbing domain, which is located at one or more nodes of low-level (i.e., nodes with large degree). Then, we calculate exactly the first passage probability, the survival probability, the mean, and the variance of first passage time by using the generating functions as a tool. Finally, for some illustrative examples corresponding to given choices of starting node and absorbing domain, we derive exact and explicit results for such first passage properties. The method we propose can as well address the cases where the absorbing domain is located at one or more nodes of high-level on the PSFW, and it can also be used to calculate the first passage properties on other networks with self-similar structure, such as (u, v) flowers and recursive scale-free trees.
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Affiliation(s)
- Junhao Peng
- School of Math and Information Science, Guangzhou University, Guangzhou 510006, China
| | - Elena Agliari
- Department of Mathematics, Sapienza University, Rome 00185, Italy
| | - Zhongzhi Zhang
- Shanghai Key Laboratory of Intelligent Information Processing, School of Computer Science, Fudan University, Shanghai 200433, China
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21
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Sun W, Ding Q, Zhang J, Chen F. Coherence in a family of tree networks with an application of Laplacian spectrum. CHAOS (WOODBURY, N.Y.) 2014; 24:043112. [PMID: 25554032 DOI: 10.1063/1.4897568] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
In this paper, we study consensus problems in a family of tree networks and investigate first and second order consensus denoted as network coherence characterized by Laplacian spectrum. According to the tree structures, we obtain the recursive relationships of Laplacian matrix and its Laplacian eigenvalues at two successive generations. We then obtain the analytical expressions for the sum of the reciprocals and the square reciprocals of all nonzero Laplacian eigenvalues. Finally, we calculate first and second order network coherence and see that the scalings of first and second order coherence with network size N are lnN and N, which are smaller than some studied tree graphs, such as Peano basin fractal, T-graph, and generalized Vicsek fractal.
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Affiliation(s)
- Weigang Sun
- Department of Mathematics, School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Qingyan Ding
- Department of Mathematics, School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Jingyuan Zhang
- Department of Mathematics, School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
| | - Fangyue Chen
- Department of Mathematics, School of Science, Hangzhou Dianzi University, Hangzhou 310018, China
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22
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Lin Y, Zhang Z. Controlling the efficiency of trapping in a scale-free small-world network. Sci Rep 2014; 4:6274. [PMID: 25199481 PMCID: PMC4158604 DOI: 10.1038/srep06274] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2014] [Accepted: 08/07/2014] [Indexed: 12/02/2022] Open
Abstract
Designing appropriate techniques to effectively control the trapping process in complex systems towards desirable efficiency is of paramount importance in the study of trapping problem. In this paper, we present three different methods guiding trapping process in a scale-free small-world network with a deep trap positioned at an initial node. All the proposed approaches dominate the trapping process by varying the transition probability of random walks. In the first two techniques, the transition probability is modified by an introduced weight parameter and a stochastic parameter, respectively. And the third scheme is a combination of the first two approaches, controlled by both parameters synchronously. For all the three control strategies, we derive both analytically and numerically the average trapping time (ATT) as the measure of the trapping efficiency, with the obtained explicit expressions being in good agreement with their corresponding exact numerical solutions. Our results indicate that the weight parameter changes simultaneously the dominating scaling of ATT and its prefactor. Different from the weight parameter, the stochastic parameter only modifies the prefactor, keeping the leading scaling unchanged. Finally, compared with the first two manners, the third strategy is a fine control, possessing the advantages of the first two ones. This work deepens the understanding of controlling trapping process in complex systems.
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Affiliation(s)
- Yuan Lin
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai 200433, China
| | - Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
- Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai 200433, China
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23
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Peng X, Zhang Z. Maximal entropy random walk improves efficiency of trapping in dendrimers. J Chem Phys 2014; 140:234104. [DOI: 10.1063/1.4883335] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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24
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Peng J, Xu G. Efficiency analysis of diffusion on T-fractals in the sense of random walks. J Chem Phys 2014; 140:134102. [DOI: 10.1063/1.4869799] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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25
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Bonaventura M, Nicosia V, Latora V. Characteristic times of biased random walks on complex networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 89:012803. [PMID: 24580277 DOI: 10.1103/physreve.89.012803] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2013] [Indexed: 06/03/2023]
Abstract
We consider degree-biased random walkers whose probability to move from a node to one of its neighbors of degree k is proportional to k(α), where α is a tuning parameter. We study both numerically and analytically three types of characteristic times, namely (i) the time the walker needs to come back to the starting node, (ii) the time it takes to visit a given node for the first time, and (iii) the time it takes to visit all the nodes of the network. We consider a large data set of real-world networks and we show that the value of α which minimizes the three characteristic times differs from the value α(min)=-1 analytically found for uncorrelated networks in the mean-field approximation. In addition to this, we found that assortative networks have preferentially a value of α(min) in the range [-1,-0.5], while disassortative networks have α(min) in the range [-0.5,0]. We derive an analytical relation between the degree correlation exponent ν and the optimal bias value α(min), which works well for real-world assortative networks. When only local information is available, degree-biased random walks can guarantee smaller characteristic times than the classical unbiased random walks by means of an appropriate tuning of the motion bias.
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Affiliation(s)
- Moreno Bonaventura
- School of Mathematical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, United Kingdom and School of Business and Management, Queen Mary University of London, Mile End Road, London E1 4NS, United Kingdom
| | - Vincenzo Nicosia
- School of Mathematical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, United Kingdom
| | - Vito Latora
- School of Mathematical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, United Kingdom and Dipartimento di Fisica e Astronomia, Università di Catania and INFN, 95123 Catania, Italy
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26
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Yang Y, Zhang Z. Random walks in unweighted and weighted modular scale-free networks with a perfect trap. J Chem Phys 2013; 139:234106. [PMID: 24359351 DOI: 10.1063/1.4835655] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Designing optimal structure favorable to diffusion and effectively controlling the trapping process are crucial in the study of trapping problem--random walks with a single trap. In this paper, we study the trapping problem occurring on unweighted and weighted networks, respectively. The networks under consideration display the striking scale-free, small-world, and modular properties, as observed in diverse real-world systems. For binary networks, we concentrate on three cases of trapping problems with the trap located at a peripheral node, a neighbor of the root with the least connectivity, and a farthest node, respectively. For weighted networks with edge weights controlled by a parameter, we also study three trapping problems, in which the trap is placed separately at the root, a neighbor of the root with the least degree, and a farthest node. For all the trapping problems, we obtain the analytical formulas for the average trapping time (ATT) measuring the efficiency of the trapping process, as well as the leading scaling of ATT. We show that for all the trapping problems in the binary networks with a trap located at different nodes, the dominating scalings of ATT reach the possible minimum scalings, implying that the networks have optimal structure that is advantageous to efficient trapping. Furthermore, we show that for trapping in the weighted networks, the ATT is controlled by the weight parameter, through modifying which, the ATT can behave superlinearly, linearly, sublinearly, or logarithmically with the system size. This work could help improving the design of systems with efficient trapping process and offers new insight into control of trapping in complex systems.
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Affiliation(s)
- Yihang Yang
- School of Computer Science, Fudan University, Shanghai 200433, China
| | - Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China
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27
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Liu H, Zhang Z. Laplacian spectra of recursive treelike small-world polymer networks: analytical solutions and applications. J Chem Phys 2013; 138:114904. [PMID: 23534659 DOI: 10.1063/1.4794921] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A central issue in the study of polymer physics is to understand the relation between the geometrical properties of macromolecules and various dynamics, most of which are encoded in the Laplacian spectra of a related graph describing the macrostructural structure. In this paper, we introduce a family of treelike polymer networks with a parameter, which has the same size as the Vicsek fractals modeling regular hyperbranched polymers. We study some relevant properties of the networks and show that they have an exponentially decaying degree distribution and exhibit the small-world behavior. We then study the Laplacian eigenvalues and their corresponding eigenvectors of the networks under consideration, with both quantities being determined through the recursive relations deduced from the network structure. Using the obtained recursive relations we can find all the eigenvalues and eigenvectors for the networks with any size. Finally, as some applications, we use the eigenvalues to study analytically or semi-analytically three dynamical processes occurring in the networks, including random walks, relaxation dynamics in the framework of generalized Gaussian structure, as well as the fluorescence depolarization under quasiresonant energy transfer. Moreover, we compare the results with those corresponding to Vicsek fractals, and show that the dynamics differ greatly for the two network families, which thus enables us to distinguish between them.
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Affiliation(s)
- Hongxiao Liu
- School of Computer Science, Fudan University, Shanghai 200433, China
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28
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Wu B, Zhang Z. Controlling the efficiency of trapping in treelike fractals. J Chem Phys 2013; 139:024106. [DOI: 10.1063/1.4812690] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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29
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Lin Y, Zhang Z. Random walks in weighted networks with a perfect trap: an application of Laplacian spectra. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 87:062140. [PMID: 23848660 DOI: 10.1103/physreve.87.062140] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2013] [Indexed: 06/02/2023]
Abstract
Trapping processes constitute a primary problem of random walks, which characterize various other dynamical processes taking place on networks. Most previous works focused on the case of binary networks, while there is much less related research about weighted networks. In this paper, we propose a general framework for the trapping problem on a weighted network with a perfect trap fixed at an arbitrary node. By utilizing the spectral graph theory, we provide an exact formula for mean first-passage time (MFPT) from one node to another, based on which we deduce an explicit expression for average trapping time (ATT) in terms of the eigenvalues and eigenvectors of the Laplacian matrix associated with the weighted graph, where ATT is the average of MFPTs to the trap over all source nodes. We then further derive a sharp lower bound for the ATT in terms of only the local information of the trap node, which can be obtained in some graphs. Moreover, we deduce the ATT when the trap is distributed uniformly in the whole network. Our results show that network weights play a significant role in the trapping process. To apply our framework, we use the obtained formulas to study random walks on two specific networks: trapping in weighted uncorrelated networks with a deep trap, the weights of which are characterized by a parameter, and Lévy random walks in a connected binary network with a trap distributed uniformly, which can be looked on as random walks on a weighted network. For weighted uncorrelated networks we show that the ATT to any target node depends on the weight parameter, that is, the ATT to any node can change drastically by modifying the parameter, a phenomenon that is in contrast to that for trapping in binary networks. For Lévy random walks in any connected network, by using their equivalence to random walks on a weighted complete network, we obtain the optimal exponent characterizing Lévy random walks, which have the minimal average of ATTs taken over all target nodes.
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Affiliation(s)
- Yuan Lin
- School of Computer Science, Fudan University, Shanghai 200433, China
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30
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Lin Y, Zhang Z. Influence of trap location on the efficiency of trapping in dendrimers and regular hyperbranched polymers. J Chem Phys 2013; 138:094905. [DOI: 10.1063/1.4793309] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Hwang S, Lee DS, Kahng B. Origin of the hub spectral dimension in scale-free networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 87:022816. [PMID: 23496577 DOI: 10.1103/physreve.87.022816] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2012] [Indexed: 06/01/2023]
Abstract
The return-to-origin probability and the first-passage-time distribution are essential quantities for understanding transport phenomena in diverse systems. The behaviors of these quantities typically depend on the spectral dimension d(s). However, it was recently revealed that in scale-free networks these quantities show a crossover between two power-law regimes characterized by d(s) and the so-called hub spectral dimension d(s)((hub)) due to the heterogeneity of connectivities of each node. To understand the origin of d(s)((hub)) from a theoretical perspective, we study a random walk problem on hierarchical scale-free networks by using the renormalization group (RG) approach. Under the RG transformation, not only the system size but also the degree of each node changes due to the scale-free nature of the degree distribution. We show that the anomalous behavior of random walks involving the hub spectral dimension d(s)((hub)) is induced by the conservation of the power-law degree distribution under the RG transformation.
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Affiliation(s)
- S Hwang
- Department of Physics and Astronomy, Seoul National University, Seoul 151-747, Korea
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32
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Yang Y, Zhang Z. Optimal scale-free network with a minimum scaling of transport efficiency for random walks with a perfect trap. J Chem Phys 2013; 138:034101. [DOI: 10.1063/1.4774269] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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33
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Zhang Z, Shan T, Chen G. Random walks on weighted networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 87:012112. [PMID: 23410288 DOI: 10.1103/physreve.87.012112] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2012] [Indexed: 06/01/2023]
Abstract
Random walks constitute a fundamental mechanism for a large set of dynamics taking place on networks. In this article, we study random walks on weighted networks with an arbitrary degree distribution, where the weight of an edge between two nodes has a tunable parameter. By using the spectral graph theory, we derive analytical expressions for the stationary distribution, mean first-passage time (MFPT), average trapping time (ATT), and lower bound of the ATT, which is defined as the average MFPT to a given node over every starting point chosen from the stationary distribution. All these results depend on the weight parameter, indicating a significant role of network weights on random walks. For the case of uncorrelated networks, we provide explicit formulas for the stationary distribution as well as ATT. Particularly, for uncorrelated scale-free networks, when the target is placed on a node with the highest degree, we show that ATT can display various scalings of network size, depending also on the same parameter. Our findings could pave a way to delicately controlling random-walk dynamics on complex networks.
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Affiliation(s)
- Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433,
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34
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Zhang Z, Sheng Y, Hu Z, Chen G. Optimal and suboptimal networks for efficient navigation measured by mean-first passage time of random walks. CHAOS (WOODBURY, N.Y.) 2012; 22:043129. [PMID: 23278064 DOI: 10.1063/1.4768665] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
For a random walk on a network, the mean first-passage time from a node i to another node j chosen stochastically, according to the equilibrium distribution of Markov chain representing the random walk is called the Kemeny constant, which is closely related to the navigability on the network. Thus, the configuration of a network that provides optimal or suboptimal navigation efficiency is a question of interest. It has been proved that complete graphs have the exact minimum Kemeny constant over all graphs. In this paper, by using another method we first prove that complete graphs are the optimal networks with a minimum Kemeny constant, which grows linearly with the network size. Then, we study the Kemeny constant of a class of sparse networks that exhibit remarkable scale-free and fractal features as observed in many real-life networks, which cannot be described by complete graphs. To this end, we determine the closed-form solutions to all eigenvalues and their degeneracies of the networks. Employing these eigenvalues, we derive the exact solution to the Kemeny constant, which also behaves linearly with the network size for some particular cases of networks. We further use the eigenvalue spectra to determine the number of spanning trees in the networks under consideration, which is in complete agreement with previously reported results. Our work demonstrates that scale-free and fractal properties are favorable for efficient navigation, which could be considered when designing networks with high navigation efficiency.
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Affiliation(s)
- Zhongzhi Zhang
- School of Computer Science, Fudan University, Shanghai 200433, China.
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35
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Lin Y, Julaiti A, Zhang Z. Mean first-passage time for random walks in general graphs with a deep trap. J Chem Phys 2012; 137:124104. [DOI: 10.1063/1.4754735] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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36
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Wu B, Lin Y, Zhang Z, Chen G. Trapping in dendrimers and regular hyperbranched polymers. J Chem Phys 2012; 137:044903. [DOI: 10.1063/1.4737635] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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