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Majka M, Góra PF. Thermodynamically consistent Langevin dynamics with spatially correlated noise predicting frictionless regime and transient attraction effect. Phys Rev E 2016; 94:042110. [PMID: 27841532 DOI: 10.1103/physreve.94.042110] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2016] [Indexed: 11/07/2022]
Abstract
While the origins of temporal correlations in Langevin dynamics have been thoroughly researched, the understanding of spatially correlated noise (SCN) is rather incomplete. In particular, very little is known about the relation between friction and SCN. In this article, starting from the microscopic, deterministic model, we derive the analytical formula for the spatial correlation function in the particle-bath interactions. This expression shows that SCN is the inherent component of binary mixtures, originating from the effective (entropic) interactions. Further, employing this spatial correlation function, we postulate the thermodynamically consistent Langevin equation driven by the Gaussian SCN and calculate the adequate fluctuation-dissipation relation. The thermodynamical consistency is achieved by introducing the spatially variant friction coefficient, which can be also derived analytically. This coefficient exhibits a number of intriguing properties, e.g., the singular behavior for certain types of interactions. Eventually, we apply this new theory to the system of two charged particles in the presence of counter-ions. Such particles interact via the screened-charge Yukawa potential and the inclusion of SCN leads to the emergence of the anomalous frictionless regime. In this regime the particles can experience active propulsion leading to the transient attraction effect. This effect suggests a nonequilibrium mechanism facilitating the molecular binding of the like-charged particles.
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Affiliation(s)
- M Majka
- Marian Smoluchowski Institute of Physics, Jagiellonian University, Prof. Stanisława Łojasiewicza 11, 30-348 Kraków Poland
| | - P F Góra
- Marian Smoluchowski Institute of Physics, Jagiellonian University, Prof. Stanisława Łojasiewicza 11, 30-348 Kraków Poland
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2
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Ooshida T, Goto S, Matsumoto T, Otsuki M. Insights from Single-File Diffusion into Cooperativity in Higher Dimensions. ACTA ACUST UNITED AC 2016. [DOI: 10.1142/s1793048015400019] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Diffusion in colloidal suspensions can be very slow due to the cage effect, which confines each particle within a short radius on one hand, and involves large-scale cooperative motions on the other. In search of insight into this cooperativity, here the authors develop a formalism to calculate the displacement correlation in colloidal systems, mainly in the two-dimensional (2D) case. To clarify the idea for it, studies are reviewed on cooperativity among the particles in the one-dimensional (1D) case, i.e. the single-file diffusion (SFD). As an improvement over the celebrated formula by Alexander and Pincus on the mean-square displacement (MSD) in SFD, it is shown that the displacement correlation in SFD can be calculated from Lagrangian correlation of the particle interval in the one-dimensional case, and also that the formula can be extended to higher dimensions. The improved formula becomes exact for large systems. By combining the formula with a nonlinear theory for correlation, a correction to the asymptotic law for the MSD in SFD is obtained. In the 2D case, the linear theory gives description of vortical cooperative motion.
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Affiliation(s)
- Takeshi Ooshida
- Department of Mechanical and Aerospace Engineering, Tottori University, Tottori 680-8552, Japan
| | - Susumu Goto
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Takeshi Matsumoto
- Division of Physics and Astronomy, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Michio Otsuki
- Department of Materials Science, Shimane University, Matsue 690-8504, Japan
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3
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Lucena D, Galván-Moya JE, Ferreira WP, Peeters FM. Single-file and normal diffusion of magnetic colloids in modulated channels. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 89:032306. [PMID: 24730841 DOI: 10.1103/physreve.89.032306] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Indexed: 06/03/2023]
Abstract
Diffusive properties of interacting magnetic dipoles confined in a parabolic narrow channel and in the presence of a periodic modulated (corrugated) potential along the unconfined direction are studied using Brownian dynamics simulations. We compare our simulation results with the analytical result for the effective diffusion coefficient of a single particle by Festa and d'Agliano [Physica A 90, 229 (1978)] and show the importance of interparticle interaction on the diffusion process. We present results for the diffusion of magnetic dipoles as a function of linear density, strength of the periodic modulation and commensurability factor.
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Affiliation(s)
- D Lucena
- Departamento de Física, Universidade Federal do Ceará, Caixa Postal 6030, Campus do Pici, 60440-554 Fortaleza, Ceará, Brazil and Department of Physics, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - J E Galván-Moya
- Department of Physics, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
| | - W P Ferreira
- Departamento de Física, Universidade Federal do Ceará, Caixa Postal 6030, Campus do Pici, 60440-554 Fortaleza, Ceará, Brazil
| | - F M Peeters
- Departamento de Física, Universidade Federal do Ceará, Caixa Postal 6030, Campus do Pici, 60440-554 Fortaleza, Ceará, Brazil and Department of Physics, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp, Belgium
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Hanes RDL, Schmiedeberg M, Egelhaaf SU. Brownian particles on rough substrates: relation between intermediate subdiffusion and asymptotic long-time diffusion. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:062133. [PMID: 24483412 DOI: 10.1103/physreve.88.062133] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2013] [Indexed: 06/03/2023]
Abstract
Brownian particles in random potentials show an extended regime of subdiffusive dynamics at intermediate times. The asymptotic diffusive behavior is often established at very long times and thus cannot be accessed in experiments or simulations. For the case of one-dimensional random potentials with Gaussian distributed energies, we present a detailed analysis of experimental and simulation data. It is shown that the asymptotic long-time diffusion coefficient can be related to the behavior at intermediate times, namely, the minimum of the exponent that characterizes subdiffusion and hence corresponds to the maximum degree of subdiffusion. As a consequence, investigating only the dynamics at intermediate times is sufficient to predict the order of magnitude of the long-time diffusion coefficient and the time scale at which the crossover from subdiffusion to diffusion occurs, i.e., when the long-time diffusive regime and hence thermal equilibrium is established. Inversely, theoretical predictions derived for the asymptotic long-time behavior can be used to quantitatively characterize the intermediate behavior, which hardly has been studied so far.
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Affiliation(s)
- Richard D L Hanes
- Condensed Matter Physics Laboratory, Heinrich Heine University, D-40225 Düsseldorf, Germany
| | - Michael Schmiedeberg
- Institute for Theoretical Physics 2: Soft Matter, Heinrich Heine University, D-40225 Düsseldorf, Germany and Department of Physics, University of Osnabrück, D-49076 Osnabrück, Germany
| | - Stefan U Egelhaaf
- Condensed Matter Physics Laboratory, Heinrich Heine University, D-40225 Düsseldorf, Germany
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Herrera-Velarde S, Euán-Díaz EC, Córdoba-Valdés F, Castañeda-Priego R. Hydrodynamic correlations in three-particle colloidal systems in harmonic traps. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2013; 25:325102. [PMID: 23838468 DOI: 10.1088/0953-8984/25/32/325102] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We report on the hydrodynamic correlations between colloids immersed in a low Reynolds number fluid. We consider colloidal arrays composed of three particles; each colloid is trapped in a single harmonic potential and interacts with the other colloids only via hydrodynamic forces. We focus on the role of a third body in the two-body correlation functions. We give special attention to a collinear configuration of particles, although the salient features of an equilateral triangle configuration are outlined. The correlation functions are computed both by means of Brownian dynamics simulations, and by solving analytically and numerically the Langevin equation under the assumption of constant diffusion tensor; this approximation is validated through computer simulations. We explicitly show that the presence of a third body affects the auto- and cross-correlation functions and that their behaviour, in some specific conditions, can be different from that commonly seen in a two-particle system. In particular, we have found that the auto-correlation functions show a slower decay, while the cross-correlation ones exhibit a temporal shift and a weaker amplitude. Moreover, an unexpected behaviour related to a positive correlation and associated with the appearance of new dynamical modes is observed in the case of the collinear array of three particles. This interesting effect might be used to tune the degree of hydrodynamic correlation in few-body colloidal systems.
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Affiliation(s)
- Salvador Herrera-Velarde
- Subdirección de Postgrado e Investigación, Instituto Tecnológico Superior de Xalapa, Sección 5A Reserva Territorial s/n, 91096, Xalapa, Veracruz, Mexico
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Lucena D, Ferreira WP, Munarin FF, Farias GA, Peeters FM. Tunable diffusion of magnetic particles in a quasi-one-dimensional channel. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 87:012307. [PMID: 23410331 DOI: 10.1103/physreve.87.012307] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2012] [Revised: 12/04/2012] [Indexed: 06/01/2023]
Abstract
The diffusion of a system of ferromagnetic dipoles confined in a quasi-one-dimensional parabolic trap is studied using Brownian dynamics simulations. We show that the dynamics of the system is tunable by an in-plane external homogeneous magnetic field. For a strong applied magnetic field, we find that the mobility of the system, the exponent of diffusion, and the crossover time among different diffusion regimes can be tuned by the orientation of the magnetic field. For weak magnetic fields, the exponent of diffusion in the subdiffusive regime is independent of the orientation of the external field.
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Affiliation(s)
- D Lucena
- Departamento de Física, Universidade Federal do Ceará, Caixa Postal 6030, Campus do Pici, 60455-760 Fortaleza, Ceará, Brazil.
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Euán-Díaz EC, Misko VR, Peeters FM, Herrera-Velarde S, Castañeda-Priego R. Single-file diffusion in periodic energy landscapes: the role of hydrodynamic interactions. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 86:031123. [PMID: 23030882 DOI: 10.1103/physreve.86.031123] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2012] [Indexed: 06/01/2023]
Abstract
We report on the dynamical properties of interacting colloids confined to one dimension and subjected to external periodic energy landscapes. We particularly focus on the influence of hydrodynamic interactions on the mean-square displacement. Using Brownian dynamics simulations, we study colloidal systems with two types of repulsive interparticle interactions, namely, Yukawa and superparamagnetic potentials. We find that in the homogeneous case, hydrodynamic interactions lead to an enhancement of the particle mobility and the mean-square displacement at long times scales as t(α), with α=1/2+ε and ε being a small correction. This correction, however, becomes much more important in the presence of an external field, which breaks the homogeneity of the particle distribution along the line and, therefore, promotes a richer dynamical scenario due to the hydrodynamical coupling among particles. We provide here the complete dynamical scenario in terms of the external potential parameters: amplitude and commensurability.
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Affiliation(s)
- E C Euán-Díaz
- Division of Sciences and Engineering, University of Guanajuato, Loma del Bosque 103, Lomas del Campestre, 37150 León, Guanajuato, Mexico
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Lucena D, Tkachenko DV, Nelissen K, Misko VR, Ferreira WP, Farias GA, Peeters FM. Transition from single-file to two-dimensional diffusion of interacting particles in a quasi-one-dimensional channel. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 85:031147. [PMID: 22587078 DOI: 10.1103/physreve.85.031147] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2011] [Revised: 11/01/2011] [Indexed: 05/31/2023]
Abstract
Diffusive properties of a monodisperse system of interacting particles confined to a quasi-one-dimensional channel are studied using molecular dynamics simulations. We calculate numerically the mean-squared displacement (MSD) and investigate the influence of the width of the channel (or the strength of the confinement potential) on diffusion in finite-size channels of different shapes (i.e., straight and circular). The transition from single-file diffusion to the two-dimensional diffusion regime is investigated. This transition [regarding the calculation of the scaling exponent (α) of the MSD (Δx(2)(t) ∝ t(α)] as a function of the width of the channel is shown to change depending on the channel's confinement profile. In particular, the transition can be either smooth (i.e., for a parabolic confinement potential) or rather sharp (i.e., for a hard-wall potential), as distinct from infinite channels where this transition is abrupt. This result can be explained by qualitatively different distributions of the particle density for the different confinement potentials.
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Affiliation(s)
- D Lucena
- Departamento de Física, Universidade Federal do Ceará, Fortaleza, Ceará, Brazil
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Delfau JB, Coste C, Saint Jean M. Single-file diffusion of particles with long-range interactions: damping and finite-size effects. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 84:011101. [PMID: 21867107 DOI: 10.1103/physreve.84.011101] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2011] [Indexed: 05/31/2023]
Abstract
We study the single file diffusion of a cyclic chain of particles that cannot cross each other, in a thermal bath, with long-ranged interactions and arbitrary damping. We present simulations that exhibit new behaviors specifically associated with systems of small numbers of particles and with small damping. In order to understand those results, we present an original analysis based on the decomposition of the particles' motion in the normal modes of the chain. Our model explains all dynamic regimes observed in our simulations and provides convincing estimates of the crossover times between those regimes.
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Affiliation(s)
- Jean-Baptiste Delfau
- Laboratoire Matiere et Systemes Complexes, UMR CNRS 7057 et Université Paris Diderot-Paris 7, Bâtiment Condorcet, 10 rue Alice Domon et Léonie Duquet, 75205 Paris Cedex 13, France
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