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Gu C, Li J, Zhou J, Yang H, Rohling J. Network Structure of the Master Clock Is Important for Its Primary Function. Front Physiol 2021; 12:678391. [PMID: 34483953 PMCID: PMC8415478 DOI: 10.3389/fphys.2021.678391] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 07/22/2021] [Indexed: 11/13/2022] Open
Abstract
A master clock located in the suprachiasmatic nucleus (SCN) regulates the circadian rhythm of physiological and behavioral activities in mammals. The SCN has two main functions in the regulation: an endogenous clock produces the endogenous rhythmic signal in body rhythms, and a calibrator synchronizes the body rhythms to the external light-dark cycle. These two functions have been determined to depend on either the dynamic behaviors of individual neurons or the whole SCN neuronal network. In this review, we first introduce possible network structures for the SCN, as revealed by time series analysis from real experimental data. It was found that the SCN network is heterogeneous and sparse, that is, the average shortest path length is very short, some nodes are hubs with large node degrees but most nodes have small node degrees, and the average node degree of the network is small. Secondly, the effects of the SCN network structure on the SCN function are reviewed based on mathematical models of the SCN network. It was found that robust rhythms with large amplitudes, a high synchronization between SCN neurons and a large entrainment ability exists mainly in small-world and scale-free type networks, but not other types. We conclude that the SCN most probably is an efficient small-world type or scale-free type network, which drives SCN function.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai, China
| | - Jiahui Li
- Business School, University of Shanghai for Science and Technology, Shanghai, China
| | - Jian Zhou
- Business School, University of Shanghai for Science and Technology, Shanghai, China
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai, China
| | - Jos Rohling
- Laboratory for Neurophysiology, Department of Cell and Chemical Biology, Leiden University Medical Center, Leiden, Netherlands
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Zheng M, Li L, Peng H, Xiao J, Yang Y, Zhang Y, Zhao H. Globally fixed-time synchronization of coupled neutral-type neural network with mixed time-varying delays. PLoS One 2018; 13:e0191473. [PMID: 29370248 PMCID: PMC5784957 DOI: 10.1371/journal.pone.0191473] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Accepted: 01/07/2018] [Indexed: 11/18/2022] Open
Abstract
This paper mainly studies the globally fixed-time synchronization of a class of coupled neutral-type neural networks with mixed time-varying delays via discontinuous feedback controllers. Compared with the traditional neutral-type neural network model, the model in this paper is more general. A class of general discontinuous feedback controllers are designed. With the help of the definition of fixed-time synchronization, the upper right-hand derivative and a defined simple Lyapunov function, some easily verifiable and extensible synchronization criteria are derived to guarantee the fixed-time synchronization between the drive and response systems. Finally, two numerical simulations are given to verify the correctness of the results.
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Affiliation(s)
- Mingwen Zheng
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, China
- School of Mathematics and Statistics, Shandong University of Technology, Zibo 255000, China
| | - Lixiang Li
- Information Security Center, State Key Laboratory of Networking and Switching Technology, National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876, China
| | - Haipeng Peng
- Information Security Center, State Key Laboratory of Networking and Switching Technology, National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876, China
| | - Jinghua Xiao
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, China
- State Key Laboratory of Information Photonics and Optical Communications, Beijing University of Posts and Telecommunications, Beijing 100876, China
| | - Yixian Yang
- Information Security Center, State Key Laboratory of Networking and Switching Technology, National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of Posts and Telecommunications, Beijing 100876, China
| | - Yanping Zhang
- School of Mathematics and Statistics, Shandong University of Technology, Zibo 255000, China
| | - Hui Zhao
- Shandong Provincial Key Laboratory of Network Based Intelligent Computing, School of Information Science and Engineering, University of Jinan, Jinan 250022, China
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Gu C, Yang H. The asymmetry of the entrainment range induced by the difference in intrinsic frequencies between two subgroups within the suprachiasmatic nucleus. CHAOS (WOODBURY, N.Y.) 2017; 27:063115. [PMID: 28679229 DOI: 10.1063/1.4989385] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The rhythms of physiological and behavioral activities in mammals, which are regulated by the main clock suprachiasmatic nucleus (SCN) in the brain, can not be only synchronized to the natural 24 h light-dark cycle, but also to cycles with artificial periods. The range of the artificial periods that the animal can be synchronized to is called entrainment range. In the absence of the light-dark cycle, the animal can also maintain the circadian rhythm with an endogenous period close to 24 h. Experiments found that the entrainment range is not symmetrical with respect to the endogenous period. In the present study, an explanation is given for the asymmetry based on a Kuramoto model which describes the neuronal network of the SCN. Our numerical simulations and theoretical analysis show that the asymmetry results from the difference in the intrinsic frequencies between two subgroups of the SCN, as well as the entrainment range is affected by the difference.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China
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Gu C, Yang H, Rohling JH. Dissociation between two subgroups of the suprachiasmatic nucleus affected by the number of damped oscillated neurons. Phys Rev E 2017; 95:032302. [PMID: 28415286 DOI: 10.1103/physreve.95.032302] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Indexed: 12/15/2022]
Abstract
In mammals, the main clock located in the suprachiasmatic nucleus (SCN) of the brain synchronizes the body rhythms to the environmental light-dark cycle. The SCN is composed of about 2×10^{4} neurons which can be classified into three oscillatory phenotypes: self-sustained oscillators, damped oscillators, and arrhythmic neurons. Exposed to an artificial external light-dark cycle with a period of 22h instead of 24h, two subgroups of the SCN can become desynchronized (dissociated). The ventrolateral (VL) subgroup receives photic input and is entrained to the external cycle and a dorsomedial (DM) subgroup oscillates with its endogenous (i.e., free running) period and is synchronized to the external light-dark cycle through coupling from the VL. In the present study, we examined the effects of damped oscillatory neurons on the dissociation between VL and DM under an external 22h cycle. We found that, with increasing numbers of damped oscillatory neurons located in the VL, the dissociation between the VL and DM emerges, but if these neurons are increasingly present in the DM the dissociation disappears. Hence, the damped oscillatory neurons in different subregions of the SCN play distinct roles in the dissociation between the two subregions of the SCN. This shows that synchrony between SCN subregions is affected by the number of damped oscillatory neurons and the location of these cells. We suggest that more knowledge on the number and the location of these cells may explain why some species do show a dissociation between the subregions and others do not, as the distribution of oscillatory types of neurons offers a plausible and novel candidate mechanism to explain heterogeneity.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China.,Department of Molecular Cell Biology, Laboratory for Neurophysiology, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China
| | - Jos Ht Rohling
- Department of Molecular Cell Biology, Laboratory for Neurophysiology, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands
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Gu C, Tang M, Yang H. The synchronization of neuronal oscillators determined by the directed network structure of the suprachiasmatic nucleus under different photoperiods. Sci Rep 2016; 6:28878. [PMID: 27358024 PMCID: PMC4928114 DOI: 10.1038/srep28878] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Accepted: 06/09/2016] [Indexed: 11/09/2022] Open
Abstract
The main function of the principal clock located in the suprachiasmatic nucleus (SCN) of mammals is synchronizing the body rhythms to the 24 h light-dark cycle. Additionally, the SCN is able to adapt to the photoperiod of the cycle which varies among seasons. Under the long photoperiod (LP), the synchronization degree of the SCN neurons is lower than that under the photoperiod (SP). In the present study, a potential explanation is given for this phenomenon. We propose that the asymmetrical coupling between the light-signal-sensitive part (the ventralateral part, abbreviation: VL) and the light-signal-insensitive part (the dorsalmedial part, abbreviation: DM) of the SCN plays a role in the synchronization degree, which is reflected by the ratio of the number of the directed links from the VL neurons to the DM neurons to the total links of both directions between the VL and the DM. The ratio is assumed to characterize the directed network structure under different photoperiods, which is larger under the SP and smaller under the LP. We found that with the larger ratio in the situation of the SP, the synchronization degree is higher. Our finding may shed new light on the asymmetrical coupling between the VL and the DM, and the network structure of the SCN.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, China
| | - Ming Tang
- Web Sciences Center, University of Electronic Science and Technology of China, Chengdu 610054, China.,Big data research center, University of Electronic Science and Technology of China, Chengdu 610054, China
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, China
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Gu C, Yang H. The circadian rhythm induced by the heterogeneous network structure of the suprachiasmatic nucleus. CHAOS (WOODBURY, N.Y.) 2016; 26:053112. [PMID: 27249952 DOI: 10.1063/1.4949012] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
In mammals, the master clock is located in the suprachiasmatic nucleus (SCN), which is composed of about 20 000 nonidentical neuronal oscillators expressing different intrinsic periods. These neurons are coupled through neurotransmitters to form a network consisting of two subgroups, i.e., a ventrolateral (VL) subgroup and a dorsomedial (DM) subgroup. The VL contains about 25% SCN neurons that receive photic input from the retina, and the DM comprises the remaining 75% SCN neurons which are coupled to the VL. The synapses from the VL to the DM are evidently denser than that from the DM to the VL, in which the VL dominates the DM. Therefore, the SCN is a heterogeneous network where the neurons of the VL are linked with a large number of SCN neurons. In the present study, we mimicked the SCN network based on Goodwin model considering four types of networks including an all-to-all network, a Newman-Watts (NW) small world network, an Erdös-Rényi (ER) random network, and a Barabási-Albert (BA) scale free network. We found that the circadian rhythm was induced in the BA, ER, and NW networks, while the circadian rhythm was absent in the all-to-all network with weak cellular coupling, where the amplitude of the circadian rhythm is largest in the BA network which is most heterogeneous in the network structure. Our finding provides an alternative explanation for the induction or enhancement of circadian rhythm by the heterogeneity of the network structure.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, People's Republic of China
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Gu C, Rohling JHT, Liang X, Yang H. Impact of dispersed coupling strength on the free running periods of circadian rhythms. Phys Rev E 2016; 93:032414. [PMID: 27078397 DOI: 10.1103/physreve.93.032414] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2015] [Indexed: 11/07/2022]
Abstract
The dominant endogenous clock, named the suprachiasmatic nucleus (SCN), regulates circadian rhythms of behavioral and physiological activity in mammals. One of the main characteristics of the SCN is that the animal maintains a circadian rhythm with a period close to 24 h in the absence of a daily light-dark cycle (called the free running period). The free running period varies among species due to heterogeneity of the SCN network. Previous studies have shown that the heterogeneity in cellular coupling as well as in intrinsic neuronal periods shortens the free running period. Furthermore, as derived from experiments, one neuron's coupling strength is negatively associated with its period. It is unknown what the effects of this association between coupling strength and period are on the free running period and how the heterogeneity in coupling strength influences this free running period. In the present study we found that in the presence of a negative relationship between one neuron's coupling strength and its period, surprisingly, the dispersion of coupling strengths increases the free running period. Our present finding may shed new light on the understanding of the heterogeneous SCN network and provides an alternative explanation for the diversity of free running periods between species.
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Affiliation(s)
- Changgui Gu
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, P. R. China
| | - Jos H T Rohling
- Laboratory for Neurophysiology, Department of Molecular Cell Biology, Leiden University Medical Center, 2300RC Leiden, The Netherlands
| | - Xiaoming Liang
- School of Physics and Electronic Engineering, Jiangsu Normal University, Xuzhou 221116, China
| | - Huijie Yang
- Business School, University of Shanghai for Science and Technology, Shanghai 200093, P. R. China
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Heterogeneity induces rhythms of weakly coupled circadian neurons. Sci Rep 2016; 6:21412. [PMID: 26898574 PMCID: PMC4761972 DOI: 10.1038/srep21412] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Accepted: 01/22/2016] [Indexed: 11/08/2022] Open
Abstract
The main clock located in the suprachiasmatic nucleus (SCN) regulates circadian rhythms in mammals. The SCN is composed of approximately twenty thousand heterogeneous self-oscillating neurons, that have intrinsic periods varying from 22 h to 28 h. They are coupled through neurotransmitters and neuropeptides to form a network and output a uniform periodic rhythm. Previous studies found that the heterogeneity of the neurons leads to attenuation of the circadian rhythm with strong cellular coupling. In the present study, we investigate the heterogeneity of the neurons and of the network in the condition of constant darkness. Interestingly, we found that the heterogeneity of weakly coupled neurons enables them to oscillate and strengthen the circadian rhythm. In addition, we found that the period of the SCN network increases with the increase of the degree of heterogeneity. As the network heterogeneity does not change the dynamics of the rhythm, our study shows that the heterogeneity of the neurons is vitally important for rhythm generation in weakly coupled systems, such as the SCN, and it provides a new method to strengthen the circadian rhythm, as well as an alternative explanation for differences in free running periods between species in the absence of the daily cycle.
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Noise Induces Oscillation and Synchronization of the Circadian Neurons. PLoS One 2015; 10:e0145360. [PMID: 26691765 PMCID: PMC4687094 DOI: 10.1371/journal.pone.0145360] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2015] [Accepted: 12/01/2015] [Indexed: 11/19/2022] Open
Abstract
The principle clock of mammals, named suprachiasmatic nucleus (SCN), coordinates the circadian rhythms of behavioral and physiological activity to the external 24 h light-dark cycle. In the absence of the daily cycle, the SCN acts as an endogenous clock that regulates the ~24 h rhythm of activity. Experimental and theoretical studies usually take the light-dark cycle as a main external influence, and often ignore light pollution as an external influence. However, in modern society, the light pollution such as induced by electrical lighting influences the circadian clock. In the present study, we examined the effect of external noise (light pollution) on the collective behavior of coupled circadian oscillators under constant darkness using a Goodwin model. We found that the external noise plays distinct roles in the network behavior of neurons for weak or strong coupling between the neurons. In the case of strong coupling, the noise reduces the synchronization and the period of the SCN network. Interestingly, in the case of weak coupling, the noise induces a circadian rhythm in the SCN network which is absent in noise-free condition. In addition, the noise increases the synchronization and decreases the period of the SCN network. Our findings may shed new light on the impact of the external noise on the collective behavior of SCN neurons.
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Gu C, Xu J, Liu Z, Rohling JHT. Entrainment range of nonidentical circadian oscillators by a light-dark cycle. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2013; 88:022702. [PMID: 24032859 DOI: 10.1103/physreve.88.022702] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2013] [Indexed: 06/02/2023]
Abstract
The suprachiasmatic nucleus (SCN) is a principal circadian clock in mammals, which controls physiological and behavioral daily rhythms. The SCN has two main features: Maintaining a rhythmic cycle of approximately 24 h in the absence of a light-dark cycle (free-running period) and the ability to entrain to external light-dark cycles. Both free-running period and range of entrainment vary from one species to another. To understand this phenomenon, we investigated the diversity of a free-running period by the distribution of coupling strengths in our previous work [Phys. Rev. E 80, 030904(R) (2009)]. In this paper we numerically found that the dispersion of intrinsic periods among SCN neurons influence the entrainment range of the SCN, but has little influence on the free-running periods under constant darkness. This indicates that the dispersion of coupling strengths determines the diversity in free-running periods, while the dispersion of intrinsic periods determines the diversity in the entrainment range. A theoretical analysis based on two coupled neurons is presented to explain the results of numerical simulations.
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Affiliation(s)
- Changgui Gu
- Department of Molecular Cell Biology, Laboratory for Neurophysiology, Leiden University Medical Center, Leiden, 2300 RC, The Netherlands
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Xu J, Gu C, Pumir A, Garnier N, Liu Z. Entrainment of the suprachiasmatic nucleus network by a light-dark cycle. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 86:041903. [PMID: 23214611 DOI: 10.1103/physreve.86.041903] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2012] [Indexed: 06/01/2023]
Abstract
The synchronization of biological activity with the alternation of day and night (circadian rhythm) is performed in the brain by a group of neurons, constituting the suprachiasmatic nucleus (SCN). The SCN is divided into two subgroups of oscillating cells: the ventrolateral (VL) neurons, which are exposed to light (photic signal), and the dorsomedial (DM) neurons, which are coupled to the VL cells. When the coupling between these neurons is strong enough, the system synchronizes with the photic period. Upon increasing the cell coupling, the entrainment of the DM cells has been recently shown to occur via a very sharp (jumping) transition when the period of the photic input is larger than the intrinsic period of the cells. Here, we characterize this transition with a simple realistic model. We show that two bifurcations possibly lead to the disappearance of the endogenous mode. Using a mean-field model, we show that the jumping transition results from a supercritical Hopf-like bifurcation. This finding implies that both the period and strength of the stimulating photic signal, and the relative fraction of cells in the VL and DM compartments, are crucial in determining the synchronization of the system.
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Affiliation(s)
- Jinshan Xu
- Department of Physics, East China Normal University, Shanghai 200062, China
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Gu C, Liu Z, Schwartz WJ, Indic P. Photic desynchronization of two subgroups of circadian oscillators in a network model of the suprachiasmatic nucleus with dispersed coupling strengths. PLoS One 2012; 7:e36900. [PMID: 22615838 PMCID: PMC3353964 DOI: 10.1371/journal.pone.0036900] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2011] [Accepted: 04/09/2012] [Indexed: 11/18/2022] Open
Abstract
The suprachiasmatic nucleus (SCN) is the master circadian clock in mammals and is composed of thousands of neuronal oscillators expressing different intrinsic periods. These oscillators form a coupled network with a free-running period around 24 h in constant darkness and entrainable to the external light-dark cycle (T cycle). Coupling plays an important role in setting the period of the network and its range of entrainment. Experiments in rats have shown that two subgroups of oscillators within the SCN, a ventrolateral (VL) subgroup that receives photic input and a dorsomedial (DM) subgroup that is coupled to VL, can be desynchronized under a short (22-h) T cycle, with VL entrained to the cycle and DM free-running. We use a modified Goodwin model to understand how entrainment of the subgroups to short (22-h) and long (26-h) T cycles is influenced by light intensity, the proportion of neurons that receives photic input, and coupling heterogeneity. We find that the model's critical value for the proportion of photically-sensitive neurons is in accord with actual experimental estimates, while the model's inclusion of dispersed coupling can account for the experimental observation that VL and DM desynchronize more readily under the 22-h than under the 26-h T cycle. Heterogeneous intercellular coupling within the SCN is likely central to the generation of complex behavioral patterns.
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Affiliation(s)
- Changgui Gu
- Institute of Theoretical Physics and Department of Physics, East China Normal University, Shanghai, China
- Department of Neurology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America
| | - Zonghua Liu
- Institute of Theoretical Physics and Department of Physics, East China Normal University, Shanghai, China
- * E-mail:
| | - William J. Schwartz
- Department of Neurology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America
| | - Premananda Indic
- Department of Neurology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America
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