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Porporato A, Calabrese S, Rondoni L. Thermodynamic Langevin equations. Phys Rev E 2024; 110:054136. [PMID: 39690693 DOI: 10.1103/physreve.110.054136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Accepted: 10/29/2024] [Indexed: 12/19/2024]
Abstract
The physical significance of the stochastic processes associated to the generalized Gibbs ensembles is scrutinized here with special attention to the thermodynamic fluctuations of small systems. Differently from the so-called stochastic thermodynamics, which starts from stochastic versions of the first and second law of thermodynamics and associates thermodynamic quantities to microscopic variables, here we consider stochastic variability directly in the macroscopic variables. By recognizing the potential structure of the Gibbs ensembles, when expressed as a function of the potential entropy generation, we obtain exact nonlinear thermodynamic Langevin equations (TLEs) for macroscopic variables, with drift expressed in terms of entropic forces. The analysis of the canonical ensemble for an ideal monoatomic gas and the related TLEs show that introducing currents leads to nonequilibrium heat transfer conditions with interesting bounds on entropy production but with no obvious thermodynamic limit. For a colloidal particle under constant force, the TLEs for macroscopic variables are different from those for the microscopic position, typically used in stochastic thermodynamics; while TLEs are consistent with the fundamental equation obtained from the Hamiltonian, stochastic thermodynamics requires isothermal conditions and entropy proportional to position.
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Porporato A, Hooshyar M, Bragg AD, Katul G. Fluctuation theorem and extended thermodynamics of turbulence. Proc Math Phys Eng Sci 2020; 476:20200468. [PMID: 33362415 DOI: 10.1098/rspa.2020.0468] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Accepted: 10/21/2020] [Indexed: 11/12/2022] Open
Abstract
Turbulent flows are out-of-equilibrium because the energy supply at large scales and its dissipation by viscosity at small scales create a net transfer of energy among all scales. This energy cascade is modelled by approximating the spectral energy balance with a nonlinear Fokker-Planck equation consistent with accepted phenomenological theories of turbulence. The steady-state contributions of the drift and diffusion in the corresponding Langevin equation, combined with the killing term associated with the dissipation, induce a stochastic energy transfer across wavenumbers. The fluctuation theorem is shown to describe the scale-wise statistics of forward and backward energy transfer and their connection to irreversibility and entropy production. The ensuing turbulence entropy is used to formulate an extended turbulence thermodynamics.
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Affiliation(s)
- Amilcare Porporato
- Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA.,Princeton Environmental Institute and Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA
| | - Milad Hooshyar
- Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA.,Princeton Environmental Institute and Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA.,Princeton Environmental Institute and Princeton Institute for International and Regional Studies, Princeton University, Princeton, NJ, USA
| | - Andrew D Bragg
- Department of Civil and Environmental Engineering, Duke University, Durham, NC, USA
| | - Gabriel Katul
- Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, USA.,Department of Civil and Environmental Engineering, Duke University, Durham, NC, USA.,Nicholas School of the Environment, Duke University, Durham, NC, USA
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Szadvari I, Hudecova S, Chovancova B, Matuskova M, Cholujova D, Lencesova L, Valerian D, Ondrias K, Babula P, Krizanova O. Sodium/calcium exchanger is involved in apoptosis induced by H 2S in tumor cells through decreased levels of intracellular pH. Nitric Oxide 2019; 87:1-9. [PMID: 30849492 DOI: 10.1016/j.niox.2019.02.011] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Revised: 01/31/2019] [Accepted: 02/28/2019] [Indexed: 01/08/2023]
Abstract
We explored possibility that sodium/calcium exchanger 1 (NCX1) is involved in pH modulation and apoptosis induction in GYY4137 treated cells. We have shown that although 10 days treatment with GYY4137 did not significantly decreased volume of tumors induced by colorectal cancer DLD1 cells in nude mice, it already induced apoptosis in these tumors. Treatment of DLD1 and ovarian cancer A2780 cells with GYY4137 resulted in intracellular acidification in a concentration-dependent manner. We observed increased mRNA and protein expression of both, NCX1 and sodium/hydrogen exchanger 1 (NHE1) in DLD1-induced tumors from GYY4137-treated mice. NCX1 was coupled with NHE1 in A2780 and DLD1 cells and this complex partially disintegrated after GYY4137 treatment. We proposed that intracellular acidification is due to uncoupling of NCX1/NHE1 complex rather than blocking of the reverse mode of NCX1, probably due to internalization of NHE1. Results might contribute to understanding molecular mechanism of H2S-induced apoptosis in tumor cells.
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Affiliation(s)
- Ivan Szadvari
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Sona Hudecova
- Institute of Clinical and Translational Research, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Barbora Chovancova
- Institute of Clinical and Translational Research, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Miroslava Matuskova
- Cancer Research Institute, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Dana Cholujova
- Cancer Research Institute, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Lubomira Lencesova
- Institute of Clinical and Translational Research, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - David Valerian
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic
| | - Karol Ondrias
- Institute of Clinical and Translational Research, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Petr Babula
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic; International Clinical Research Center, St. Anne's University Hospital Brno, Brno, Czech Republic
| | - Olga Krizanova
- Department of Physiology, Faculty of Medicine, Masaryk University, Brno, Czech Republic; Institute of Clinical and Translational Research, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia.
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