1
|
Jiang R, Shang P. Dispersion complexity-entropy curves: An effective method to characterize the structures of nonlinear time series. CHAOS (WOODBURY, N.Y.) 2024; 34:033137. [PMID: 38526984 DOI: 10.1063/5.0197167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Accepted: 02/27/2024] [Indexed: 03/27/2024]
Abstract
The complexity-entropy curve (CEC) is a valuable tool for characterizing the structure of time series and finds broad application across various research fields. Despite its widespread usage, the original permutation complexity-entropy curve (PCEC), which is founded on permutation entropy (PE), exhibits a notable limitation: its inability to take the means and amplitudes of time series into considerations. This oversight can lead to inaccuracies in differentiating time series. In this paper, drawing inspiration from dispersion entropy (DE), we propose the dispersion complexity-entropy curve (DCEC) to enhance the capability of CEC in uncovering the concealed structures within nonlinear time series. Our approach initiates with simulated data including the logistic map, color noises, and various chaotic systems. The outcomes of our simulated experiments consistently showcase the effectiveness of DCEC in distinguishing nonlinear time series with diverse characteristics. Furthermore, we extend the application of DCEC to real-world data, thereby asserting its practical utility. A novel approach is proposed, wherein DCEC-based feature extraction is combined with multivariate support vector machine for the diagnosis of various types of bearing faults. This combination achieved a high accuracy rate in our experiments. Additionally, we employ DCEC to assess stock indices from different countries and periods, thereby facilitating an analysis of the complexity inherent in financial markets. Our findings reveal significant insights into the dynamic regularities and distinct structures of these indices, offering a novel perspective for analyzing financial time series. Collectively, these applications underscore the potential of DCEC as an effective tool for the nonlinear time series analysis.
Collapse
Affiliation(s)
- Runze Jiang
- School of Mathematics and Statistics, Beijing Jiaotong University, Beijing 100044, China
| | - Pengjian Shang
- School of Mathematics and Statistics, Beijing Jiaotong University, Beijing 100044, China
| |
Collapse
|
2
|
Omidvarnia A, Liégeois R, Amico E, Preti MG, Zalesky A, Van De Ville D. On the Spatial Distribution of Temporal Complexity in Resting State and Task Functional MRI. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1148. [PMID: 36010812 PMCID: PMC9407401 DOI: 10.3390/e24081148] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 08/08/2022] [Accepted: 08/10/2022] [Indexed: 06/15/2023]
Abstract
Measuring the temporal complexity of functional MRI (fMRI) time series is one approach to assess how brain activity changes over time. In fact, hemodynamic response of the brain is known to exhibit critical behaviour at the edge between order and disorder. In this study, we aimed to revisit the spatial distribution of temporal complexity in resting state and task fMRI of 100 unrelated subjects from the Human Connectome Project (HCP). First, we compared two common choices of complexity measures, i.e., Hurst exponent and multiscale entropy, and observed a high spatial similarity between them. Second, we considered four tasks in the HCP dataset (Language, Motor, Social, and Working Memory) and found high task-specific complexity, even when the task design was regressed out. For the significance thresholding of brain complexity maps, we used a statistical framework based on graph signal processing that incorporates the structural connectome to develop the null distributions of fMRI complexity. The results suggest that the frontoparietal, dorsal attention, visual, and default mode networks represent stronger complex behaviour than the rest of the brain, irrespective of the task engagement. In sum, the findings support the hypothesis of fMRI temporal complexity as a marker of cognition.
Collapse
Affiliation(s)
- Amir Omidvarnia
- Applied Machine Learning Group, Institute of Neuroscience and Medicine, Forschungszentrum Juelich, 52428 Juelich, Germany
- Institute of Systems Neuroscience, Heinrich Heine University Duesseldorf, 40225 Duesseldorf, Germany
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, 1202 Geneva, Switzerland
- Department of Radiology and Medical Informatics, University of Geneva, 1211 Geneva, Switzerland
| | - Raphaël Liégeois
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, 1202 Geneva, Switzerland
- Department of Radiology and Medical Informatics, University of Geneva, 1211 Geneva, Switzerland
| | - Enrico Amico
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, 1202 Geneva, Switzerland
- Department of Radiology and Medical Informatics, University of Geneva, 1211 Geneva, Switzerland
| | - Maria Giulia Preti
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, 1202 Geneva, Switzerland
- Department of Radiology and Medical Informatics, University of Geneva, 1211 Geneva, Switzerland
- CIBM Center for Biomedical Imaging, 1015 Lausanne, Switzerland
| | - Andrew Zalesky
- Melbourne Neuropsychiatry Centre, Department of Psychiatry, The University of Melbourne, Melbourne, VIC 3010, Australia
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC 3010, Australia
| | - Dimitri Van De Ville
- Neuro-X Institute, École Polytechnique Fédérale de Lausanne, 1202 Geneva, Switzerland
- Department of Radiology and Medical Informatics, University of Geneva, 1211 Geneva, Switzerland
| |
Collapse
|
3
|
Xie J, Gao J, Gao Z, Lv X, Wang R. Adaptive symbolic transfer entropy and its applications in modeling for complex industrial systems. CHAOS (WOODBURY, N.Y.) 2019; 29:093114. [PMID: 31575150 DOI: 10.1063/1.5086100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 08/23/2019] [Indexed: 06/10/2023]
Abstract
Directed coupling between variables is the foundation of studying the dynamical behavior of complex systems. We propose an adaptive symbolic transfer entropy (ASTE) method based on the principle of equal probability division. First, the adaptive kernel density method is used to obtain an accurate probability density function for an observation series. Second, the complete phase space of the system can be obtained by using the multivariable phase space reconstruction method. This provides common parameters for symbolizing a time series, including delay time and embedding dimension. Third, an optimization strategy is used to select the appropriate symbolic parameters of a time series, such as the symbol set and partition intervals, which can be used to convert the time series to a symbol sequence. Then the transfer entropy between the symbolic sequences can be carried out. Finally, the proposed method is analyzed and validated using the chaotic Lorenz system and typical complex industrial systems. The results show that the ASTE method is superior to the existing transfer entropy and symbolic transfer entropy methods in terms of measurement accuracy and noise resistance, and it can be applied to the network modeling and performance safety analysis of complex industrial systems.
Collapse
Affiliation(s)
- Juntai Xie
- Western China Institute of Quality Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China
| | - Jianmin Gao
- Western China Institute of Quality Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China
| | - Zhiyong Gao
- Western China Institute of Quality Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China
| | - Xiaozhe Lv
- Western China Institute of Quality Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China
| | - Rongxi Wang
- Western China Institute of Quality Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China
| |
Collapse
|
4
|
Omidvarnia A, Mesbah M, Pedersen M, Jackson G. Range Entropy: A Bridge between Signal Complexity and Self-Similarity. ENTROPY 2018; 20:e20120962. [PMID: 33266686 PMCID: PMC7512560 DOI: 10.3390/e20120962] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Revised: 12/03/2018] [Accepted: 12/06/2018] [Indexed: 11/16/2022]
Abstract
Approximate entropy (ApEn) and sample entropy (SampEn) are widely used for temporal complexity analysis of real-world phenomena. However, their relationship with the Hurst exponent as a measure of self-similarity is not widely studied. Additionally, ApEn and SampEn are susceptible to signal amplitude changes. A common practice for addressing this issue is to correct their input signal amplitude by its standard deviation. In this study, we first show, using simulations, that ApEn and SampEn are related to the Hurst exponent in their tolerance r and embedding dimension m parameters. We then propose a modification to ApEn and SampEn called range entropy or RangeEn. We show that RangeEn is more robust to nonstationary signal changes, and it has a more linear relationship with the Hurst exponent, compared to ApEn and SampEn. RangeEn is bounded in the tolerance r-plane between 0 (maximum entropy) and 1 (minimum entropy) and it has no need for signal amplitude correction. Finally, we demonstrate the clinical usefulness of signal entropy measures for characterisation of epileptic EEG data as a real-world example.
Collapse
Affiliation(s)
- Amir Omidvarnia
- The Florey Institute of Neuroscience and Mental Health, Austin Campus, Heidelberg, VIC 3084, Australia
- Faculty of Medicine, Dentistry and Health Sciences, The University of Melbourne, VIC 3010, Australia
- Correspondence: ; Tel.: +61-3-9035-7182
| | - Mostefa Mesbah
- Department of Electrical and Computer Engineering, Sultan Qaboos University, Muscat 123, Oman
| | - Mangor Pedersen
- The Florey Institute of Neuroscience and Mental Health, Austin Campus, Heidelberg, VIC 3084, Australia
| | - Graeme Jackson
- The Florey Institute of Neuroscience and Mental Health, Austin Campus, Heidelberg, VIC 3084, Australia
- Faculty of Medicine, Dentistry and Health Sciences, The University of Melbourne, VIC 3010, Australia
- Department of Neurology, Austin Health, Melbourne, VIC 3084, Australia
| |
Collapse
|