1
|
Nerger BA, Kashyap K, Deveney BT, Lou J, Hanan BF, Liu Q, Khalil A, Lungjangwa T, Cheriyan M, Gupta A, Jaenisch R, Weitz DA, Mahadevan L, Mooney DJ. Tuning porosity of macroporous hydrogels enables rapid rates of stress relaxation and promotes cell expansion and migration. Proc Natl Acad Sci U S A 2024; 121:e2410806121. [PMID: 39467139 PMCID: PMC11551365 DOI: 10.1073/pnas.2410806121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2024] [Accepted: 09/24/2024] [Indexed: 10/30/2024] Open
Abstract
Extracellular matrix (ECM) viscoelasticity broadly regulates cell behavior. While hydrogels can approximate the viscoelasticity of native ECM, it remains challenging to recapitulate the rapid stress relaxation observed in many tissues without limiting the mechanical stability of the hydrogel. Here, we develop macroporous alginate hydrogels that have an order of magnitude increase in the rate of stress relaxation as compared to bulk hydrogels. The increased rate of stress relaxation occurs across a wide range of polymer molecular weights (MWs), which enables the use of high MW polymer for improved mechanical stability of the hydrogel. The rate of stress relaxation in macroporous hydrogels depends on the volume fraction of pores and the concentration of bovine serum albumin, which is added to the hydrogels to stabilize the macroporous structure during gelation. Relative to cell spheroids encapsulated in bulk hydrogels, spheroids in macroporous hydrogels have a significantly larger area and smaller circularity because of increased cell migration. A computational model provides a framework for the relationship between the macroporous architecture and morphogenesis of encapsulated spheroids that is consistent with experimental observations. Taken together, these findings elucidate the relationship between macroporous hydrogel architecture and stress relaxation and help to inform the design of macroporous hydrogels for materials-based cell therapies.
Collapse
Affiliation(s)
- Bryan A. Nerger
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
| | - Kirti Kashyap
- Department of Physics, Indian Institute of Technology Hyderabad, Sangareddy, Telangana502285, India
| | - Brendan T. Deveney
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
| | - Junzhe Lou
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
| | - Blake F. Hanan
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
| | - Qi Liu
- Whitehead Institute for Biomedical Research, Cambridge, MA02142
| | - Andrew Khalil
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
- Whitehead Institute for Biomedical Research, Cambridge, MA02142
| | | | | | - Anupam Gupta
- Department of Physics, Indian Institute of Technology Hyderabad, Sangareddy, Telangana502285, India
| | - Rudolf Jaenisch
- Whitehead Institute for Biomedical Research, Cambridge, MA02142
- Department of Biology, Massachusetts Institute of Technology, Cambridge, MA02142
| | - David A. Weitz
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
- Department of Physics, Harvard University, Cambridge, MA02138
| | - L. Mahadevan
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Department of Physics, Harvard University, Cambridge, MA02138
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA02138
| | - David J. Mooney
- John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA02138
- Wyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA02115
| |
Collapse
|
2
|
Sebtosheikh M, Naji A. Active osmoticlike pressure on permeable inclusions. Phys Rev E 2024; 109:034607. [PMID: 38632760 DOI: 10.1103/physreve.109.034607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Accepted: 02/14/2024] [Indexed: 04/19/2024]
Abstract
We use a standard minimal active Brownian model to investigate the osmotic-like effective pressure generated by active fluids on fixed hollow inclusions. These inclusions are enclosed by a permeable (albeit nonflexible) membrane, and the interior and exterior regions of the inclusions have different particle motility strengths. We consider both rectangular and disklike inclusions and analyze the effects of various system parameters, such as excluded volume interaction between active particles, hardness of membrane, and active particle density, on the effective pressure produced on the enclosing membrane. We focus on the range of intermediate to high motility strengths and analyze the effective pressure in the steady state. Our findings for the active pressure produced in the interior and exterior regions of the inclusion indicate that the pressure is higher in the region with lower motility due to the relatively stronger accumulation of active particles.
Collapse
Affiliation(s)
- Mahmoud Sebtosheikh
- School of Nano Science, Institute for Research in Fundamental Sciences (IPM), Tehran 19538-33511, Iran
- School of Physics, Institute for Research in Fundamental Sciences (IPM), Tehran 19538-33511, Iran
| | - Ali Naji
- School of Nano Science, Institute for Research in Fundamental Sciences (IPM), Tehran 19538-33511, Iran
- Department of Physics, College of Science, Sultan Qaboos University, Muscat 123, Oman
| |
Collapse
|
3
|
Schiltz-Rouse E, Row H, Mallory SA. Kinetic temperature and pressure of an active Tonks gas. Phys Rev E 2023; 108:064601. [PMID: 38243499 DOI: 10.1103/physreve.108.064601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 11/06/2023] [Indexed: 01/21/2024]
Abstract
Using computer simulation and analytical theory, we study an active analog of the well-known Tonks gas, where active Brownian particles are confined to a periodic one-dimensional (1D) channel. By introducing the notion of a kinetic temperature, we derive an accurate analytical expression for the pressure and clarify the paradoxical behavior where active Brownian particles confined to 1D exhibit anomalous clustering but no motility-induced phase transition. More generally, this work provides a deeper understanding of pressure in active systems as we uncover a unique link between the kinetic temperature and swim pressure valid for active Brownian particles in higher dimensions.
Collapse
Affiliation(s)
- Elijah Schiltz-Rouse
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Hyeongjoo Row
- Department of Chemical and Biomolecular Engineering, UC Berkeley, Berkeley, California 94720, USA
| | - Stewart A Mallory
- Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| |
Collapse
|
4
|
Omar AK, Row H, Mallory SA, Brady JF. Mechanical theory of nonequilibrium coexistence and motility-induced phase separation. Proc Natl Acad Sci U S A 2023; 120:e2219900120. [PMID: 37094152 PMCID: PMC10160997 DOI: 10.1073/pnas.2219900120] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Accepted: 03/24/2023] [Indexed: 04/26/2023] Open
Abstract
Nonequilibrium phase transitions are routinely observed in both natural and synthetic systems. The ubiquity of these transitions highlights the conspicuous absence of a general theory of phase coexistence that is broadly applicable to both nonequilibrium and equilibrium systems. Here, we present a general mechanical theory for phase separation rooted in ideas explored nearly a half-century ago in the study of inhomogeneous fluids. The core idea is that the mechanical forces within the interface separating two coexisting phases uniquely determine coexistence criteria, regardless of whether a system is in equilibrium or not. We demonstrate the power and utility of this theory by applying it to active Brownian particles, predicting a quantitative phase diagram for motility-induced phase separation in both two and three dimensions. This formulation additionally allows for the prediction of novel interfacial phenomena, such as an increasing interface width while moving deeper into the two-phase region, a uniquely nonequilibrium effect confirmed by computer simulations. The self-consistent determination of bulk phase behavior and interfacial phenomena offered by this mechanical perspective provide a concrete path forward toward a general theory for nonequilibrium phase transitions.
Collapse
Affiliation(s)
- Ahmad K. Omar
- Department of Materials Science and Engineering, University of California, Berkeley, CA94720
- Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA94720
| | - Hyeongjoo Row
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA91125
| | - Stewart A. Mallory
- Department of Chemistry, The Pennsylvania State University, University Park, PA16802
| | - John F. Brady
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA91125
| |
Collapse
|
5
|
Moore F, Russo J, Liverpool TB, Royall CP. Active Brownian particles in random and porous environments. J Chem Phys 2023; 158:104907. [PMID: 36922118 DOI: 10.1063/5.0131340] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2023] Open
Abstract
The transport of active particles may occur in complex environments, in which it emerges from the interplay between the mobility of the active components and the quenched disorder of the environment. Here, we explore the structural and dynamical properties of active Brownian particles (ABPs) in random environments composed of fixed obstacles in three dimensions. We consider different arrangements of the obstacles. In particular, we consider two particular situations corresponding to experimentally realizable settings. First, we model pinning particles in (non-overlapping) random positions and, second, in a percolating gel structure and provide an extensive characterization of the structure and dynamics of ABPs in these complex environments. We find that the confinement increases the heterogeneity of the dynamics, with new populations of absorbed and localized particles appearing close to the obstacles. This heterogeneity has a profound impact on the motility induced phase separation exhibited by the particles at high activity, ranging from nucleation and growth in random disorder to a complex phase separation in porous environments.
Collapse
Affiliation(s)
- Fergus Moore
- Bristol Centre for Functional Nanomaterials, University of Bristol, Bristol BS8 1FD, United Kingdom
| | - John Russo
- Department of Physics, Sapienza University of Rome, P.le Aldo Moro 5, 00185 Rome, Italy
| | | | - C Patrick Royall
- H. H. Wills Physics Laboratory, Tyndall Ave., Bristol BS8 1TL, United Kingdom
| |
Collapse
|
6
|
Omar AK, Klymko K, GrandPre T, Geissler PL, Brady JF. Tuning nonequilibrium phase transitions with inertia. J Chem Phys 2023; 158:074904. [PMID: 36813709 DOI: 10.1063/5.0138256] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
Abstract
In striking contrast to equilibrium systems, inertia can profoundly alter the structure of active systems. Here, we demonstrate that driven systems can exhibit effective equilibrium-like states with increasing particle inertia, despite rigorously violating the fluctuation-dissipation theorem. Increasing inertia progressively eliminates motility-induced phase separation and restores equilibrium crystallization for active Brownian spheres. This effect appears to be general for a wide class of active systems, including those driven by deterministic time-dependent external fields, whose nonequilibrium patterns ultimately disappear with increasing inertia. The path to this effective equilibrium limit can be complex, with finite inertia sometimes acting to accentuate nonequilibrium transitions. The restoration of near equilibrium statistics can be understood through the conversion of active momentum sources to passive-like stresses. Unlike truly equilibrium systems, the effective temperature is now density dependent, the only remnant of the nonequilibrium dynamics. This density-dependent temperature can in principle introduce departures from equilibrium expectations, particularly in response to strong gradients. Our results provide additional insight into the effective temperature ansatz while revealing a mechanism to tune nonequilibrium phase transitions.
Collapse
Affiliation(s)
- Ahmad K Omar
- Department of Materials Science and Engineering, University of California, Berkeley, California 94720, USA
| | - Katherine Klymko
- NERSC, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - Trevor GrandPre
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - Phillip L Geissler
- Department of Chemistry, University of California, Berkeley, California 94720, USA
| | - John F Brady
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| |
Collapse
|
7
|
Martin Roca J, Martinez R, martinez pedrero F, Ramirez J, Valeriani C. Dynamical anomalies and structural features of Active Brownian Particles characterised by two repulsive length scales. J Chem Phys 2022; 156:164502. [DOI: 10.1063/5.0087601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
In this work we study a two-dimensional system composed by Active Brownian Particles (ABPs) interacting via a repulsive potential with two-length-scales, a soft shell and a hard-core. Depending on the ratio between the strength of the soft shell barrier and the activity, we find two regimes: If this ratio is much larger or smaller than 1, the observed behavior is comparable with ABPs interacting via a single length-scale potential. If this ratio is similar to 1, the two length-scales are relevant for both structure and dynamical properties. On the structural side, when the system exhibits a motility induced phase separation, the dense phase is characterised by new and more complex structures compared with the hexatic phase observed in single length-scale systems.On the dynamical side, as far as we are aware, this is the first representation of an anomalous dynamics in active particles.
Collapse
Affiliation(s)
| | | | | | - Jorge Ramirez
- Chemical Engineering, Universidad Politécnica de Madrid Escuela Técnica Superior de Ingenieros Industriales, Spain
| | - Chantal Valeriani
- Estructura de la Materia, Fisica Termica y Electronica, Universidad Complutense de Madrid, Spain
| |
Collapse
|
8
|
Regev I, Guevorkian K, Gupta A, Pourquié O, Mahadevan L. Rectified random cell motility as a mechanism for embryo elongation. Development 2022; 149:274852. [PMID: 35344041 PMCID: PMC9017234 DOI: 10.1242/dev.199423] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2021] [Accepted: 01/25/2022] [Indexed: 12/24/2022]
Abstract
ABSTRACT
The body of vertebrate embryos forms by posterior elongation from a terminal growth zone called the tail bud. The tail bud is a source of highly motile cells that eventually constitute the presomitic mesoderm (PSM), a tissue that plays an important role in elongation movements. PSM cells establish an anterior-posterior cell motility gradient that parallels a gradient associated with the degradation of a specific cellular signal (FGF) known to be implicated in cell motility. Here, we combine the electroporation of fluorescent reporters in the PSM with time-lapse imaging in the chicken embryo to quantify cell diffusive movements along the motility gradient. We show that a simple microscopic model for random cell motility induced by FGF activity along with geometric confinement leads to rectified tissue elongation consistent with our observations. A continuum analog of the microscopic model leads to a macroscopic mechano-chemical model for tissue extension that couples FGF activity-induced cell motility and tissue rheology, and is consistent with the experimentally observed speed and extent of elongation. Together, our experimental observations and theoretical models explain how the continuous addition of cells at the tail bud combined with lateral confinement can be converted into oriented movement and drive body elongation.
Collapse
Affiliation(s)
- Ido Regev
- Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA
- Department of Solar Energy and Environmental Physics, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus 84990, Israel
| | - Karine Guevorkian
- Institut de Génétique et de Biologie Moléculaire et Cellulaire, Université de Strasbourg, CNRS, Inserm, Illkirch, France
- Harvard Medical School, Department of Genetics, Brigham and Women's Hospital, Department of Pathology, Boston, MA 02115, USA
- Institut Curie, Université PSL, Sorbonne Université, CNRS UMR168, Laboratoire Physico-Chimie Curie, 75005 Paris, France
| | - Anupam Gupta
- Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA
- Department of Physics, Indian Institute of Technology Hyderabad, Telangana 502285, India
| | - Olivier Pourquié
- Harvard Medical School, Department of Genetics, Brigham and Women's Hospital, Department of Pathology, Boston, MA 02115, USA
| | - L. Mahadevan
- Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA
- Department of Physics and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| |
Collapse
|
9
|
Gandikota MC, Cacciuto A. Effective forces between active polymers. Phys Rev E 2022; 105:034503. [PMID: 35428068 DOI: 10.1103/physreve.105.034503] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 03/01/2022] [Indexed: 06/14/2023]
Abstract
The characterization of the interactions between two fully flexible self-avoiding polymers is one of the classic and most important problems in polymer physics. In this paper we measure these interactions in the presence of active fluctuations. We introduce activity into the problem using two of the most popular models in this field, one where activity is effectively embedded into the monomers' dynamics, and the other where passive polymers fluctuate in an explicit bath of active particles. We establish the conditions under which the interaction between active polymers can be mapped into the classical passive problem. We observe that the active bath can drive the development of strong attractive interactions between the polymers and that, upon enforcing a significant degree of overlap, they come together to form a single double-stranded unit. A phase diagram tracing this change in conformational behavior is also reported.
Collapse
Affiliation(s)
- M C Gandikota
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
| | - A Cacciuto
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
| |
Collapse
|
10
|
Sebtosheikh M, Naji A. Noncentral forces mediated between two inclusions in a bath of active Brownian rods. Sci Rep 2021; 11:23100. [PMID: 34845241 PMCID: PMC8630027 DOI: 10.1038/s41598-021-02295-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Accepted: 11/12/2021] [Indexed: 11/09/2022] Open
Abstract
Using Brownian Dynamics simulations, we study effective interactions mediated between two identical and impermeable disks (inclusions) immersed in a bath of identical, active (self-propelled), Brownian rods in two spatial dimensions, by assuming that the self-propulsion axis of the rods may generally deviate from their longitudinal axis. When the self-propulsion is transverse (perpendicular to the rod axis), the accumulation of active rods around the inclusions is significantly enhanced, causing a more expansive steric layering (ring formation) of the rods around the inclusions, as compared with the reference case of longitudinally self-propelling rods. As a result, the transversally self-propelling rods also mediate a significantly longer ranged effective interaction between the inclusions. The bath-mediated interaction arises due to the overlaps between the active-rod rings formed around the inclusions, as they are brought into small separations. When the self-propulsion axis is tilted relative to the rod axis, we find an asymmetric imbalance of active-rod accumulation around the inclusion dimer. This leads to a noncentral interaction, featuring an anti-parallel pair of transverse force components and, hence, a bath-mediated torque on the dimer.
Collapse
Affiliation(s)
- Mahmoud Sebtosheikh
- School of Physics, Institute for Research in Fundamental Sciences (IPM), P.O. Box 19395-5531, Tehran, Iran.
| | - Ali Naji
- School of Physics, Institute for Research in Fundamental Sciences (IPM), P.O. Box 19395-5531, Tehran, Iran.
- School of Nano Science, Institute for Research in Fundamental Sciences (IPM), P.O. Box 19395-5531, Tehran, Iran.
| |
Collapse
|
11
|
Mallory SA, Omar AK, Brady JF. Dynamic overlap concentration scale of active colloids. Phys Rev E 2021; 104:044612. [PMID: 34781543 DOI: 10.1103/physreve.104.044612] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2020] [Accepted: 10/06/2021] [Indexed: 11/07/2022]
Abstract
By introducing the notion of a dynamic overlap concentration scale, we identify additional universal features of the mechanical properties of active colloids. We codify these features by recognizing that the characteristic length scale of an active particle's trajectory, the run length, introduces a concentration scale ϕ^{*}. Large-scale simulations of repulsive active Brownian particles (ABPs) confirm that this run-length dependent concentration, the trajectory-space analog of the overlap concentration in polymer solutions, delineates distinct concentration regimes in which interparticle collisions alter particle trajectories. Using ϕ^{*} and concentration scales associated with colloidal jamming, the mechanical equation of state for ABPs collapses onto a set of principal curves that contain several overlooked features. The inclusion of these features qualitatively alters previous predictions of the behavior for active colloids, as we demonstrate by computing the spinodal for a suspension of purely repulsive ABPs. Our findings suggest that dynamic overlap concentration scales should help unravel the behavior of active and driven systems.
Collapse
Affiliation(s)
- Stewart A Mallory
- Department of Chemistry, The Pennsylvania State University, University Park, Pennyslvania 16802, USA
| | - Ahmad K Omar
- Department of Materials Science and Engineering, University of California, Berkeley, California 94720, USA
| | - John F Brady
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| |
Collapse
|
12
|
Fazli Z, Naji A. Active particles with polar alignment in ring-shaped confinement. Phys Rev E 2021; 103:022601. [PMID: 33736018 DOI: 10.1103/physreve.103.022601] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Accepted: 01/13/2021] [Indexed: 12/17/2022]
Abstract
We study steady-state properties of active, nonchiral and chiral Brownian particles with polar alignment and steric interactions confined within a ring-shaped confinement (annulus) in two dimensions. Exploring possible interplays between polar interparticle alignment, geometric confinement and the surface curvature, being incorporated here on minimal levels, we report a surface-population reversal effect, whereby active particles migrate from the outer concave boundary of the annulus to accumulate on its inner convex boundary. This contrasts the conventional picture, implying stronger accumulation of active particles on concave boundaries relative to the convex ones. The population reversal is caused by both particle alignment and surface curvature, disappearing when either of these factors is absent. We explore the ensuing consequences for the chirality-induced current and swim pressure of active particles and analyze possible roles of system parameters, such as the mean number density of particles and particle self-propulsion, chirality, and alignment strengths.
Collapse
Affiliation(s)
- Zahra Fazli
- School of Physics, Institute for Research in Fundamental Sciences (IPM), Tehran 19395-5531, Iran
| | - Ali Naji
- School of Physics, Institute for Research in Fundamental Sciences (IPM), Tehran 19395-5531, Iran.,School of Nano Science, Institute for Research in Fundamental Sciences (IPM), Tehran 19395-5531, Iran
| |
Collapse
|
13
|
Speck T. Coexistence of active Brownian disks: van der Waals theory and analytical results. Phys Rev E 2021; 103:012607. [PMID: 33601548 DOI: 10.1103/physreve.103.012607] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Accepted: 01/06/2021] [Indexed: 11/07/2022]
Abstract
At thermal equilibrium, intensive quantities like temperature and pressure have to be uniform throughout the system, restricting inhomogeneous systems composed of different phases. The paradigmatic example is the coexistence of vapor and liquid, a state that can also be observed for active Brownian particles steadily driven away from equilibrium. Recently, a strategy has been proposed that allows to predict phase equilibria of active particles [Solon et al., Phys. Rev. E 97, 020602(R) (2018)2470-004510.1103/PhysRevE.97.020602]. Here we elaborate on this strategy and formulate it in the framework of a van der Waals theory for active disks. For a given equation of state, we derive the effective free energy analytically and show that it yields coexisting densities in very good agreement with numerical results. We discuss the interfacial tension and the relation to Cahn-Hilliard models.
Collapse
Affiliation(s)
- Thomas Speck
- Institut für Physik, Johannes Gutenberg-Universität Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
| |
Collapse
|
14
|
Sebtosheikh M, Naji A. Effective interactions mediated between two permeable disks in an active fluid. Sci Rep 2020; 10:15570. [PMID: 32968107 PMCID: PMC7511345 DOI: 10.1038/s41598-020-71209-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Accepted: 08/12/2020] [Indexed: 01/30/2023] Open
Abstract
We study steady-state properties of a bath of active Brownian particles (ABPs) in two dimensions in the presence of two fixed, permeable (hollow) disklike inclusions, whose interior and exterior regions can exhibit mismatching motility (self-propulsion) strengths for the ABPs. We show that such a discontinuous motility field strongly affects spatial distribution of ABPs and thus also the effective interaction mediated between the inclusions through the active bath. Such net interactions arise from soft interfacial repulsions between ABPs that sterically interact with and/or pass through permeable membranes assumed to enclose the inclusions. Both regimes of repulsion and attractive (albeit with different mechanisms) are reported and summarized in overall phase diagrams.
Collapse
Affiliation(s)
- Mahmoud Sebtosheikh
- School of Physics, Institute for Research in Fundamental Sciences (IPM), P.O. Box 19395-5531, Tehran, Iran
| | - Ali Naji
- School of Physics, Institute for Research in Fundamental Sciences (IPM), P.O. Box 19395-5531, Tehran, Iran
| |
Collapse
|
15
|
Mallory SA, Bowers ML, Cacciuto A. Universal reshaping of arrested colloidal gels via active doping. J Chem Phys 2020; 153:084901. [PMID: 32872893 DOI: 10.1063/5.0016514] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Colloids that interact via a short-range attraction serve as the primary building blocks for a broad range of self-assembled materials. However, one of the well-known drawbacks to this strategy is that these building blocks rapidly and readily condense into a metastable colloidal gel. Using computer simulations, we illustrate how the addition of a small fraction of purely repulsive self-propelled colloids, a technique referred to as active doping, can prevent the formation of this metastable gel state and drive the system toward its thermodynamically favored crystalline target structure. The simplicity and robust nature of this strategy offers a systematic and generic pathway to improving the self-assembly of a large number of complex colloidal structures. We discuss in detail the process by which this feat is accomplished and provide quantitative metrics for exploiting it to modulate the self-assembly. We provide evidence for the generic nature of this approach by demonstrating that it remains robust under a number of different anisotropic short-ranged pair interactions in both two and three dimensions. In addition, we report on a novel microphase in mixtures of passive and active colloids. For a broad range of self-propelling velocities, it is possible to stabilize a suspension of fairly monodisperse finite-size crystallites. Surprisingly, this microphase is also insensitive to the underlying pair interaction between building blocks. The active stabilization of these moderately sized monodisperse clusters is quite remarkable and should be of great utility in the design of hierarchical self-assembly strategies. This work further bolsters the notion that active forces can play a pivotal role in directing colloidal self-assembly.
Collapse
Affiliation(s)
- S A Mallory
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - M L Bowers
- Department of Chemistry, Columbia University, New York, New York 10027, USA
| | - A Cacciuto
- Department of Chemistry, Columbia University, New York, New York 10027, USA
| |
Collapse
|
16
|
Giannini JA, Puckett JG. Testing a thermodynamic approach to collective animal behavior in laboratory fish schools. Phys Rev E 2020; 101:062605. [PMID: 32688602 DOI: 10.1103/physreve.101.062605] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2019] [Accepted: 05/08/2020] [Indexed: 11/07/2022]
Abstract
Collective behaviors displayed by groups of social animals are observed frequently in nature. Understanding and predicting the behavior of complex biological systems is dependent on developing effective descriptions and models. While collective animal systems are characteristically nonequilibrium, we can employ concepts from equilibrium statistical mechanics to motivate the measurement of material-like properties in laboratory animal aggregates. Here, we present results from a new set of experiments that utilize high speed footage of two-dimensional schooling events, particle tracking, and projected static and dynamic light fields to observe and control the behavior of negatively phototaxic fish schools (Hemigrammus bleheri). First, we use static light fields consisting of dark circular regions to produce visual stimuli that confine the schools to a range of areas. We find that schools have a maximum density which is independent of group size, and that a swim pressurelike quantity, Π increases linearly with number density, suggesting that unperturbed schools exist on an isotherm. Next, we use dynamic light fields where the radius of the dark region shrinks linearly with time to compress the schools. We find that an effective temperature parameter depends on the compression time and our results are thus consistent with the school having a constant heat flux. These findings further evidence the utility of effective thermodynamic descriptions of nonequilibrium systems in collective animal behavior.
Collapse
Affiliation(s)
- Julia A Giannini
- Department of Physics, Syracuse University, Syracuse, New York 13244, USA
| | - James G Puckett
- Department of Physics, Gettysburg College, Gettysburg, Pennsylvania 17325, USA
| |
Collapse
|
17
|
Ma Z, Yang M, Ni R. Dynamic Assembly of Active Colloids: Theory and Simulation. ADVANCED THEORY AND SIMULATIONS 2020. [DOI: 10.1002/adts.202000021] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Zhan Ma
- School of Chemical and Biomedical EngineeringNanyang Technological University62 Nanyang Drive, 637459 Singapore
| | - Mingcheng Yang
- Beijing National Laboratory for Condensed Matter Physics and Institute of PhysicsChinese Academy of SciencesBeijing 100190 China
- School of Physical SciencesUniversity of Chinese Academy of SciencesBeijing 100049 China
| | - Ran Ni
- School of Chemical and Biomedical EngineeringNanyang Technological University62 Nanyang Drive, 637459 Singapore
| |
Collapse
|
18
|
Zakine R, Zhao Y, Knežević M, Daerr A, Kafri Y, Tailleur J, van Wijland F. Surface Tensions between Active Fluids and Solid Interfaces: Bare vs Dressed. PHYSICAL REVIEW LETTERS 2020; 124:248003. [PMID: 32639798 DOI: 10.1103/physrevlett.124.248003] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 03/26/2020] [Accepted: 05/07/2020] [Indexed: 06/11/2023]
Abstract
We analyze the surface tension exerted at the interface between an active fluid and a solid boundary in terms of tangential forces. Focusing on active systems known to possess an equation of state for the pressure, we show that interfacial forces are of a more complex nature. Using a number of macroscopic setups, we show that the surface tension is a combination of an equation-of-state abiding part and of setup-dependent contributions. The latter arise from generic setup-dependent steady currents which "dress" the measurement of the "bare" surface tension. The former shares interesting properties with its equilibrium counterpart, and can be used to generalize the Young-Laplace law to active systems. Finally, we show how a suitably designed probe can directly access this bare surface tension, which can also be computed using a generalized virial formula.
Collapse
Affiliation(s)
- R Zakine
- Université Paris Diderot, Laboratoire Matière et Systèmes Complexes (MSC), UMR 7057 CNRS, F-75205 Paris, France
| | - Y Zhao
- Université Paris Diderot, Laboratoire Matière et Systèmes Complexes (MSC), UMR 7057 CNRS, F-75205 Paris, France
- School of Physics and Astronomy and Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240, China
| | - M Knežević
- Institut für Theoretische Physik, Technische Universität Berlin, Hardenbergstraße 36, D-10623 Berlin, Germany
| | - A Daerr
- Université Paris Diderot, Laboratoire Matière et Systèmes Complexes (MSC), UMR 7057 CNRS, F-75205 Paris, France
| | - Y Kafri
- Department of Physics, Technion, Haifa 32000, Israel
| | - J Tailleur
- Université Paris Diderot, Laboratoire Matière et Systèmes Complexes (MSC), UMR 7057 CNRS, F-75205 Paris, France
| | - F van Wijland
- Université Paris Diderot, Laboratoire Matière et Systèmes Complexes (MSC), UMR 7057 CNRS, F-75205 Paris, France
| |
Collapse
|
19
|
Abstract
Large-scale collective behavior in suspensions of active particles can be understood from the balance of statistical forces emerging beyond the direct microscopic particle interactions. Here we review some aspects of the collective forces that can arise in suspensions of self-propelled active Brownian particles: wall forces under confinement, interfacial forces, and forces on immersed bodies mediated by the suspension. Even for non-aligning active particles, these forces are intimately related to a non-uniform polarization of particle orientations induced by walls and bodies, or inhomogeneous density profiles. We conclude by pointing out future directions and promising areas for the application of collective forces in synthetic active matter, as well as their role in living active matter.
Collapse
Affiliation(s)
- Thomas Speck
- Institut für Physik, Johannes Gutenberg-Universität Mainz, Staudingerweg 7-9, 55128 Mainz, Germany.
| |
Collapse
|
20
|
Abstract
It has been discovered that active matter generates novel physical quantities such as the swim pressure. This quantity arises from the exchange of extra momentum between active particles and the boundaries of the system. Given its origin, this quantity can exist at different scales; hence microorganisms and larger organisms like fish or birds generate their own swim pressure. For larger organisms or for high swimming speeds, inertia cannot necessarily be neglected; hence in this paper, we start by calculating analytically the effect of finite translational and rotational particles' inertia on the diffusion of a system of noninteracting spherical active Brownian particles. From this analysis, an enhanced diffusion coefficient due to rotational inertia is obtained, and an alternative effective persistence length and an alternative reorientation time, both sensitive to rotational inertia, are also identified. Afterwards, and to see the implications of finite inertia on bulk properties, the pressure of this system is elucidated by calculating its respective swim and Reynolds pressures. It is found that their sum becomes asymptotically sensitive to the square root of its rotational inertia. To validate our analytical results, Langevin dynamics simulations are also performed showing an excellent agreement between our theoretical predictions and the numerical results.
Collapse
Affiliation(s)
- Mario Sandoval
- Department of Physics, Universidad Autonoma Metropolitana-Iztapalapa, Mexico City 09340, Mexico
| |
Collapse
|
21
|
Omar AK, Wang ZG, Brady JF. Microscopic origins of the swim pressure and the anomalous surface tension of active matter. Phys Rev E 2020; 101:012604. [PMID: 32069575 DOI: 10.1103/physreve.101.012604] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Indexed: 06/10/2023]
Abstract
The unique pressure exerted by active particles-the "swim" pressure-has proven to be a useful quantity in explaining many of the seemingly confounding behaviors of active particles. However, its use has also resulted in some puzzling findings including an extremely negative surface tension between phase separated active particles. Here, we demonstrate that this contradiction stems from the fact that the swim pressure is not a true pressure. At a boundary or interface, the reduction in particle swimming generates a net active force density-an entirely self-generated body force. The pressure at the boundary, which was previously identified as the swim pressure, is in fact an elevated (relative to the bulk) value of the traditional particle pressure that is generated by this interfacial force density. Recognizing this unique mechanism for stress generation allows us to define a much more physically plausible surface tension. We clarify the utility of the swim pressure as an "equivalent pressure" (analogous to those defined from electrostatic and gravitational body forces) and the conditions in which this concept can be appropriately applied.
Collapse
Affiliation(s)
- Ahmad K Omar
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Zhen-Gang Wang
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - John F Brady
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| |
Collapse
|
22
|
Fily Y. Self-propelled particle in a nonconvex external potential: Persistent limit in one dimension. J Chem Phys 2019; 150:174906. [PMID: 31067874 DOI: 10.1063/1.5085759] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Equilibrium mapping techniques for nonaligning self-propelled particles have made it possible to predict the density profile of an active ideal gas in a wide variety of external potentials. However, they fail when the self-propulsion is very persistent and the potential is nonconvex, which is precisely when the most uniquely active phenomena occur. Here, we show how to predict the density profile of a 1D active Ornstein-Uhlenbeck particle in an arbitrary external potential in the persistent limit and discuss the consequences of the potential's nonconvexity on the structure of the solution, including the central role of the potential's inflection points and the nonlocal dependence of the density profile on the potential.
Collapse
Affiliation(s)
- Yaouen Fily
- Wilkes Honors College, Florida Atlantic University, Jupiter, Florida 33458, USA
| |
Collapse
|
23
|
Das S, Gompper G, Winkler RG. Local stress and pressure in an inhomogeneous system of spherical active Brownian particles. Sci Rep 2019; 9:6608. [PMID: 31036857 PMCID: PMC6488661 DOI: 10.1038/s41598-019-43077-x] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 04/15/2019] [Indexed: 02/05/2023] Open
Abstract
The stress of a fluid on a confining wall is given by the mechanical wall forces, independent of the nature of the fluid being passive or active. At thermal equilibrium, an equation of state exists and stress is likewise obtained from intrinsic bulk properties; even more, stress can be calculated locally. Comparable local descriptions for active systems require a particular consideration of active forces. Here, we derive expressions for the stress exerted on a local volume of a systems of spherical active Brownian particles (ABPs). Using the virial theorem, we obtain two identical stress expressions, a stress due to momentum flux across a hypothetical plane, and a bulk stress inside of the local volume. In the first case, we obtain an active contribution to momentum transport in analogy to momentum transport in an underdamped passive system, and we introduce an active momentum. In the second case, a generally valid expression for the swim stress is derived. By simulations, we demonstrate that the local bulk stress is identical to the wall stress of a confined system for both, non-interacting ABPs as well as ABPs with excluded-volume interactions. This underlines the existence of an equation of state for a system of spherical ABPs. Most importantly, our calculations demonstrated that active stress is not a wall (boundary) effect, but is caused by momentum transport. We demonstrate that the derived stress expression permits the calculation of the local stress in inhomogeneous systems of ABPs.
Collapse
Affiliation(s)
- Shibananda Das
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425, Jülich, Germany
| | - Gerhard Gompper
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425, Jülich, Germany
| | - Roland G Winkler
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425, Jülich, Germany.
| |
Collapse
|
24
|
Epstein JM, Klymko K, Mandadapu KK. Statistical mechanics of transport processes in active fluids. II. Equations of hydrodynamics for active Brownian particles. J Chem Phys 2019; 150:164111. [DOI: 10.1063/1.5054912] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Affiliation(s)
- Jeffrey M. Epstein
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - Katherine Klymko
- Department of Chemistry, University of California, Berkeley, California 94720, USA
- Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 USA
| | - Kranthi K. Mandadapu
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, USA
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 USA
| |
Collapse
|
25
|
Krinninger P, Schmidt M. Power functional theory for active Brownian particles: General formulation and power sum rules. J Chem Phys 2019; 150:074112. [DOI: 10.1063/1.5061764] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Philip Krinninger
- Theoretische Physik II, Physikalisches Institut, Universität Bayreuth, D-95440 Bayreuth, Germany
| | - Matthias Schmidt
- Theoretische Physik II, Physikalisches Institut, Universität Bayreuth, D-95440 Bayreuth, Germany
| |
Collapse
|
26
|
Mallory SA, Cacciuto A. Activity-Enhanced Self-Assembly of a Colloidal Kagome Lattice. J Am Chem Soc 2019; 141:2500-2507. [DOI: 10.1021/jacs.8b12165] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Stewart A. Mallory
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Angelo Cacciuto
- Department of Chemistry, Columbia University, New York, New York 10027, United States
| |
Collapse
|
27
|
Yuan C, Chen A, Zhang B, Zhao N. Activity–crowding coupling effect on the diffusion dynamics of a self-propelled particle in polymer solutions. Phys Chem Chem Phys 2019; 21:24112-24125. [DOI: 10.1039/c9cp04498a] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The anomalous diffusion dynamics of an active particle in polymer solutions is studied based on a Langevin Brownian dynamics simulation.
Collapse
Affiliation(s)
- Chengli Yuan
- College of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Anpu Chen
- College of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Bingjie Zhang
- College of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Nanrong Zhao
- College of Chemistry
- Sichuan University
- Chengdu 610064
- China
| |
Collapse
|
28
|
Patch A, Sussman DM, Yllanes D, Marchetti MC. Curvature-dependent tension and tangential flows at the interface of motility-induced phases. SOFT MATTER 2018; 14:7435-7445. [PMID: 30152493 DOI: 10.1039/c8sm00899j] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Purely repulsive active particles spontaneously undergo motility-induced phase separation (MIPS) into condensed and dilute phases. Remarkably, the mechanical tension measured along the interface between these phases is negative. In equilibrium this would imply an unstable interface that wants to expand, but these out-of-equilibrium systems display long-time stability and have intrinsically stiff boundaries. Here, we study this phenomenon in detail using active Brownian particle simulations and a novel frame of reference. By shifting from the global (or laboratory) frame to a local frame that follows the dynamics of the phase boundary, we observe correlations between the local curvature of the interface and the measured value of the tension. Importantly, our analysis reveals that curvature drives sustained local tangential motion of particles within a surface layer in both the gas and the dense regions. The combined tangential current in the gas and local "self-shearing" of the surface of the dense phase suggest a stiffening interface that redirects particles along itself to heal local fluctuations. These currents restore the otherwise wildly fluctuating interface through an out-of-equilibrium Marangoni effect. We discuss the implications of our observations on phenomenological models of interfacial dynamics.
Collapse
Affiliation(s)
- Adam Patch
- Department of Physics and Soft and Living Matter Program, Syracuse University, Physics Building, Syracuse, New York 13244, USA.
| | | | | | | |
Collapse
|
29
|
Chen YF, Wang Z, Chu KC, Chen HY, Sheng YJ, Tsao HK. Hydrodynamic interaction induced breakdown of the state properties of active fluids. SOFT MATTER 2018; 14:5319-5326. [PMID: 29900446 DOI: 10.1039/c8sm00881g] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The mechanical pressure of active fluids in which swimmers are modeled by soft run-and-tumble spheres is investigated by dissipative particle dynamics simulations. The incremental pressure (Π) with respect to the system pressure with inactive swimmers comprises the direct contribution of the swimmers (π) and the indirect contribution of fluids associated with hydrodynamic interactions (HIs). The pressure can be determined from the bulk and confining wall and the former is always less than the latter. The π of dilute active dispersions is proportional to their active diffusivity while Π grows generally with propulsive force and run time. However, Π is always substantially less than π because of negative contributions to pressure by HIs. The wall pressure depends on the swimmer-wall interactions, verifying that pressure is not a state function for active spheres due to the HIs. Owing to the distinct flow patterns, Π varies with the swim-type (pusher and puller) subject to the same run-and-tumble parameters at high concentrations.
Collapse
Affiliation(s)
- Yen-Fu Chen
- Department of Chemical Engineering, National Taiwan University, Taipei, Taiwan 106, Republic of China.
| | | | | | | | | | | |
Collapse
|
30
|
Jamali T, Naji A. Active fluids at circular boundaries: swim pressure and anomalous droplet ripening. SOFT MATTER 2018; 14:4820-4834. [PMID: 29845128 DOI: 10.1039/c8sm00338f] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
We investigate the swim pressure exerted by non-chiral and chiral active particles on convex or concave circular boundaries. Active particles are modeled as non-interacting and non-aligning self-propelled Brownian particles. The convex and concave circular boundaries are used to model a fixed inclusion immersed in an active bath and a cavity (or container) enclosing the active particles, respectively. We first present a detailed analysis of the role of convex versus concave boundary curvature and of the chirality of active particles in their spatial distribution, chirality-induced currents, and the swim pressure they exert on the bounding surfaces. The results will then be used to predict the mechanical equilibria of suspended fluid enclosures (generically referred to as 'droplets') in a bulk with active particles being present either inside the bulk fluid or within the suspended droplets. We show that, while droplets containing active particles behave in accordance with standard capillary paradigms when suspended in a normal bulk, those containing a normal fluid exhibit anomalous behaviors when suspended in an active bulk. In the latter case, the excess swim pressure results in non-monotonic dependence of the inside droplet pressure on the droplet radius; hence, revealing an anomalous regime of behavior beyond a threshold radius, in which the inside droplet pressure increases upon increasing the droplet size. Furthermore, for two interconnected droplets, mechanical equilibrium can occur also when the droplets have different sizes. We thus identify a regime of anomalous droplet ripening, where two unequal-sized droplets can reach a final state of equal size upon interconnection, in stark contrast with the standard Ostwald ripening phenomenon, implying shrinkage of the smaller droplet in favor of the larger one.
Collapse
Affiliation(s)
- Tayeb Jamali
- School of Physics, Institute for Research in Fundamental Sciences (IPM), Tehran 19395-5531, Iran.
| | | |
Collapse
|
31
|
Affiliation(s)
| | - Chantal Valeriani
- Departamento de Física Aplicada I, Facultad de Ciencias Físicas, Universidad Complutense de Madrid, 28040 Madrid, Spain
| | - Angelo Cacciuto
- Department of Chemistry, Columbia University, New York, NY 10027, USA
| |
Collapse
|
32
|
Wang Z, Chen YF, Chen HY, Sheng YJ, Tsao HK. Mechanical pressure, surface excess, and polar order of a dilute rod-like nanoswimmer suspension: role of swimmer-wall interactions. SOFT MATTER 2018; 14:2906-2914. [PMID: 29589848 DOI: 10.1039/c7sm02372c] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The mechanical pressure, surface excess, and polar order of a dilute rod-like nanoswimmer suspension confined by two parallel plates are explored by dissipative particle dynamics. The accumulation and preferred orientation of swimmers near the walls are distinctly shown through the density and polar order distributions for various active force, Fa, values and rod lengths. As Fa is increased, it is interesting to observe that there exists a maximum of the polar order, revealing that the dominant mechanism of the swimmer behavior can be altered by the coupling between the active force and the rod-wall interaction. As a result, the influences of the active force on the swim pressure Π(w)a contributed by the swimmers directly and the surface excess Γ* can be classified into two scaling regimes, natural rotation (weak propulsion) and forced rotation (strong propulsion). Π(w)a and Γ* are proportional to Fa2 in the former regime but become proportional to Fa in the latter regime. For all rod-wall repulsions, the swim pressure of active rods in confined systems Π(w)a always differs from that in unbounded systems Π(b)a which is simply proportional to Fa2 associated with the active diffusivity. That is, unlike thermal equilibrium systems, Π(w)a is not a state function because of the presence of the wall-torque.
Collapse
Affiliation(s)
- Zhengjia Wang
- Condensed Matter Science and Technology Institute, School of Science, Harbin Institute of Technology, Harbin 150080, People's Republic of China
| | | | | | | | | |
Collapse
|
33
|
Rohwer CM, Solon A, Kardar M, Krüger M. Nonequilibrium forces following quenches in active and thermal matter. Phys Rev E 2018; 97:032125. [PMID: 29776074 DOI: 10.1103/physreve.97.032125] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Indexed: 06/08/2023]
Abstract
Nonequilibrium systems with conserved quantities like density or momentum are known to exhibit long-ranged correlations. This, in turn, leads to long-ranged fluctuation-induced (Casimir) forces, predicted to arise in a variety of nonequilibrium settings. Here, we study such forces, which arise transiently between parallel plates or compact inclusions in a gas of particles, following a change ("quench") in temperature or activity of the medium. Analytical calculations, as well as numerical simulations of passive or active Brownian particles, indicate two distinct forces: (i) The immediate effect of the quench is adsorption or desorption of particles of the medium to the immersed objects, which in turn initiates a front of relaxing (mean) density. This leads to time-dependent density-induced forces. (ii) A long-term effect of the quench is that density fluctuations are modified, manifested as transient (long-ranged) (pair-)correlations that relax diffusively to their (short-ranged) steady-state limit. As a result, transient fluctuation-induced forces emerge. We discuss the properties of fluctuation-induced and density-induced forces as regards universality, relaxation as a function of time, and scaling with distance between objects. Their distinct signatures allow us to distinguish the two types of forces in simulation data. Our simulations also show that a quench of the effective temperature of an active medium gives rise to qualitatively similar effects to a temperature quench in a passive medium. Based on this insight, we propose several scenarios for the experimental observation of the forces described here.
Collapse
Affiliation(s)
- Christian M Rohwer
- Max Planck Institute for Intelligent Systems, Heisenbergstrasse 3, 70569 Stuttgart, Germany
- 4th Institute for Theoretical Physics, Universität Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Alexandre Solon
- Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Mehran Kardar
- Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Matthias Krüger
- Max Planck Institute for Intelligent Systems, Heisenbergstrasse 3, 70569 Stuttgart, Germany
- 4th Institute for Theoretical Physics, Universität Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| |
Collapse
|
34
|
Duzgun A, Selinger JV. Active Brownian particles near straight or curved walls: Pressure and boundary layers. Phys Rev E 2018; 97:032606. [PMID: 29776164 DOI: 10.1103/physreve.97.032606] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2017] [Indexed: 06/08/2023]
Abstract
Unlike equilibrium systems, active matter is not governed by the conventional laws of thermodynamics. Through a series of analytic calculations and Langevin dynamics simulations, we explore how systems cross over from equilibrium to active behavior as the activity is increased. In particular, we calculate the profiles of density and orientational order near straight or circular walls and show the characteristic width of the boundary layers. We find a simple relationship between the enhancements of density and pressure near a wall. Based on these results, we determine how the pressure depends on wall curvature and hence make approximate analytic predictions for the motion of curved tracers, as well as the rectification of active particles around small openings in confined geometries.
Collapse
Affiliation(s)
- Ayhan Duzgun
- Department of Physics and Liquid Crystal Institute, Kent State University, Kent, Ohio 44242, USA
| | - Jonathan V Selinger
- Department of Physics and Liquid Crystal Institute, Kent State University, Kent, Ohio 44242, USA
| |
Collapse
|
35
|
Baek Y, Solon AP, Xu X, Nikola N, Kafri Y. Generic Long-Range Interactions Between Passive Bodies in an Active Fluid. PHYSICAL REVIEW LETTERS 2018; 120:058002. [PMID: 29481190 DOI: 10.1103/physrevlett.120.058002] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Indexed: 06/08/2023]
Abstract
A single nonspherical body placed in an active fluid generates currents via breaking of time-reversal symmetry. We show that, when two or more passive bodies are placed in an active fluid, these currents lead to long-range interactions. Using a multipole expansion, we characterize their leading-order behaviors in terms of single-body properties and show that they decay as a power law with the distance between the bodies, are anisotropic, and do not obey an action-reaction principle. The interactions lead to rich dynamics of the bodies, illustrated by the spontaneous synchronized rotation of pinned nonchiral bodies and the formation of traveling bound pairs. The occurrence of these phenomena depends on tunable properties of the bodies, thus opening new possibilities for self-assembly mediated by active fluids.
Collapse
Affiliation(s)
- Yongjoo Baek
- Department of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel
- DAMTP, Centre for Mathematical Sciences, University of Cambridge, Cambridge CB3 0WA, United Kingdom
| | - Alexandre P Solon
- Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Xinpeng Xu
- Department of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel
- Department of Physics, Guangdong Technion-Israel Institute of Technology, Shantou, Guangdong 515063, People's Republic of China
| | - Nikolai Nikola
- Department of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel
| | - Yariv Kafri
- Department of Physics, Technion-Israel Institute of Technology, Haifa 32000, Israel
| |
Collapse
|
36
|
Harder J, Cacciuto A. Hierarchical collective motion of a mixture of active dipolar Janus particles and passive charged colloids in two dimensions. Phys Rev E 2018; 97:022603. [PMID: 29548188 DOI: 10.1103/physreve.97.022603] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Indexed: 06/08/2023]
Abstract
We use computer simulations to study the behavior of a mixture of large passive charged colloids in a suspension of smaller active dipolar Janus particles. We find that when a single charged colloid is present in solution, it acquires a rotational or translational motion depending on how the active dipoles self-assemble on its surface to form active complexes. The collective behavior of these complexes is quite remarkable, and includes swarming behavior and coherent macroscopic motion. We detail how the variety of different phenomenologies emerging in this system can ultimately be controlled by the strength of the active forces and the relative concentration of the two species.
Collapse
Affiliation(s)
- J Harder
- Chemistry Department, Columbia University, New York, New York 10027, USA
| | - A Cacciuto
- Chemistry Department, Columbia University, New York, New York 10027, USA
| |
Collapse
|
37
|
Klymko K, Mandal D, Mandadapu KK. Statistical mechanics of transport processes in active fluids: Equations of hydrodynamics. J Chem Phys 2017; 147:194109. [PMID: 29166113 DOI: 10.1063/1.4997091] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
The equations of hydrodynamics including mass, linear momentum, angular momentum, and energy are derived by coarse-graining the microscopic equations of motion for systems consisting of rotary dumbbells driven by internal torques. In deriving the balance of linear momentum, we find that the symmetry of the stress tensor is broken due to the presence of non-zero torques on individual particles. The broken symmetry of the stress tensor induces internal spin in the fluid and leads us to consider the balance of internal angular momentum in addition to the usual moment of momentum. In the absence of spin, the moment of momentum is the same as the total angular momentum. In deriving the form of the balance of total angular momentum, we find the microscopic expressions for the couple stress tensor that drives the spin field. We show that the couple stress contains contributions from both intermolecular interactions and the active forces. The presence of spin leads to the idea of balance of moment of inertia due to the constant exchange of particles in a small neighborhood around a macroscopic point. We derive the associated balance of moment of inertia at the macroscale and identify the moment of inertia flux that induces its transport. Finally, we obtain the balances of total and internal energy of the active fluid and identify the sources of heat and heat fluxes in the system.
Collapse
Affiliation(s)
- Katherine Klymko
- Department of Chemistry, University of California at Berkeley, Berkeley, California 94720, USA
| | - Dibyendu Mandal
- Department of Physics, University of California at Berkeley, Berkeley, California 94720, USA
| | - Kranthi K Mandadapu
- Department of Chemical and Biomolecular Engineering, University of California at Berkeley, Berkeley, California 94720, USA
| |
Collapse
|
38
|
Razin N, Voituriez R, Elgeti J, Gov NS. Forces in inhomogeneous open active-particle systems. Phys Rev E 2017; 96:052409. [PMID: 29347778 DOI: 10.1103/physreve.96.052409] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Indexed: 11/07/2022]
Abstract
We study the force that noninteracting pointlike active particles apply to a symmetric inert object in the presence of a gradient of activity and particle sources and sinks. We consider two simple patterns of sources and sinks that are common in biological systems. We analytically solve a one-dimensional model designed to emulate higher-dimensional systems, and study a two-dimensional model by numerical simulations. We specify when the particle flux due to the creation and annihilation of particles can act to smooth the density profile that is induced by a gradient in the velocity of the active particles, and find the net resultant force due to both the gradient in activity and the particle flux. These results are compared qualitatively to observations of nuclear motion inside the oocyte, that is driven by a gradient in activity of actin-coated vesicles.
Collapse
Affiliation(s)
- Nitzan Razin
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Raphael Voituriez
- Laboratoire Jean Perrin and Laboratoire de Physique Théorique de la Matière Condensée, CNRS/Université Pierre et Marie Curie, 75005 Paris, France
| | - Jens Elgeti
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany
| | - Nir S Gov
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| |
Collapse
|
39
|
Levis D, Codina J, Pagonabarraga I. Active Brownian equation of state: metastability and phase coexistence. SOFT MATTER 2017; 13:8113-8119. [PMID: 29105717 DOI: 10.1039/c7sm01504f] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
As a result of the competition between self-propulsion and excluded volume interactions, purely repulsive self-propelled spherical particles undergo a motility-induced phase separation (MIPS). We carry out a systematic computational study, considering several interaction potentials, systems confined by hard walls or with periodic boundary conditions, and different initial conditions. This approach allows us to identify that, despite its non-equilibrium nature, the equations of state of Active Brownian Particles (ABP) across MIPS verify the characteristic properties of first-order liquid-gas phase transitions, meaning, equality of pressure of the coexisting phases once a nucleation barrier has been overcome and, in the opposite case, hysteresis around the transition as long as the system remains in the metastable region. Our results show that the equations of state of ABPs account for their phase behaviour, providing a firm basis to describe MIPS as an equilibrium-like phase transition.
Collapse
Affiliation(s)
- Demian Levis
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, Martí i Franquès 1, E08028 Barcelona, Spain.
| | | | | |
Collapse
|
40
|
Razin N, Voituriez R, Elgeti J, Gov NS. Generalized Archimedes' principle in active fluids. Phys Rev E 2017; 96:032606. [PMID: 29346950 DOI: 10.1103/physreve.96.032606] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Indexed: 11/07/2022]
Abstract
We show how a gradient in the motility properties of noninteracting pointlike active particles can cause a pressure gradient that pushes a large inert object. We calculate the force on an object inside a system of active particles with position-dependent motion parameters, in one and two dimensions, and show that a modified Archimedes' principle is satisfied. We characterize the system, both in terms of the model parameters and in terms of experimentally measurable quantities: the spatial profiles of the density, velocity and pressure. This theoretical analysis is motivated by recent experiments, which showed that the nucleus of a mouse oocyte (immature egg cell) moves from the cortex to the center due to a gradient of activity of vesicles propelled by molecular motors; it more generally applies to artificial systems of controlled localized activity.
Collapse
Affiliation(s)
- Nitzan Razin
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| | - Raphael Voituriez
- Laboratoire Jean Perrin and Laboratoire de Physique Théorique de la Matière Condensée, CNRS/Université Pierre et Marie Curie, 75005 Paris, France
| | - Jens Elgeti
- Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany
| | - Nir S Gov
- Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel
| |
Collapse
|
41
|
Abstract
Many biological systems are appropriately viewed as passive inclusions immersed in an active bath: from proteins on active membranes to microscopic swimmers confined by boundaries. The nonequilibrium forces exerted by the active bath on the inclusions or boundaries often regulate function, and such forces may also be exploited in artificial active materials. Nonetheless, the general phenomenology of these active forces remains elusive. We show that the fluctuation spectrum of the active medium, the partitioning of energy as a function of wavenumber, controls the phenomenology of force generation. We find that, for a narrow, unimodal spectrum, the force exerted by a nonequilibrium system on two embedded walls depends on the width and the position of the peak in the fluctuation spectrum, and oscillates between repulsion and attraction as a function of wall separation. We examine two apparently disparate examples: the Maritime Casimir effect and recent simulations of active Brownian particles. A key implication of our work is that important nonequilibrium interactions are encoded within the fluctuation spectrum. In this sense, the noise becomes the signal.
Collapse
|
42
|
Junot G, Briand G, Ledesma-Alonso R, Dauchot O. Active versus Passive Hard Disks against a Membrane: Mechanical Pressure and Instability. PHYSICAL REVIEW LETTERS 2017; 119:028002. [PMID: 28753366 DOI: 10.1103/physrevlett.119.028002] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2017] [Indexed: 06/07/2023]
Abstract
We experimentally study the mechanical pressure exerted by a set of respectively passive isotropic and self-propelled polar disks onto two different flexible unidimensional membranes. In the case of the isotropic disks, the mechanical pressure, inferred from the shape of the membrane, is identical for both membranes and follows the equilibrium equation of state for hard disks. On the contrary, for the self-propelled disks, the mechanical pressure strongly depends on the membrane in use and thus is not a state variable. When self-propelled disks are present on both sides of the membrane, we observe an instability of the membrane akin to the one predicted theoretically for active Brownian particles against a soft wall. In that case, the integrated mechanical pressure difference across the membrane cannot be computed from the sole knowledge of the packing fractions on both sides, further evidence of the absence of an equation of state.
Collapse
Affiliation(s)
- G Junot
- UMR Gulliver 7083 CNRS, ESPCI ParisTech, PSL Research University, 10 rue Vauquelin, 75005 Paris, France
| | - G Briand
- UMR Gulliver 7083 CNRS, ESPCI ParisTech, PSL Research University, 10 rue Vauquelin, 75005 Paris, France
| | - R Ledesma-Alonso
- UMR Gulliver 7083 CNRS, ESPCI ParisTech, PSL Research University, 10 rue Vauquelin, 75005 Paris, France
- CONACYT-Universidad de Quintana Roo, Boulevard Bahía s/n, Chetumal, 77019 Quintana Roo, México
| | - O Dauchot
- UMR Gulliver 7083 CNRS, ESPCI ParisTech, PSL Research University, 10 rue Vauquelin, 75005 Paris, France
| |
Collapse
|
43
|
Joyeux M. Recovery of mechanical pressure in a gas of underdamped active dumbbells with Brownian noise. Phys Rev E 2017; 95:052603. [PMID: 28618500 DOI: 10.1103/physreve.95.052603] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Indexed: 11/07/2022]
Abstract
In contrast with a gas at thermodynamic equilibrium, the mean force exerted on a wall by a gas of active particles usually depends on the confining potential, thereby preventing a proper definition of mechanical pressure. In this paper, we investigate numerically the properties of a gas of underdamped self-propelled dumbbells subject to Brownian noise of increasing intensity, in order to understand how the notion of pressure is recovered as noise progressively masks the effects of self-propulsion and the system approaches thermodynamic equilibrium. The simulations performed for a mobile asymmetric wall separating two chambers containing an equal number of active dumbbells highlight some subtle and unexpected properties of the system. First, Brownian noise of moderate intensity is sufficient to let mean forces equilibrate for small values of the damping coefficient, while much stronger noise is required for larger values of the damping coefficient. Moreover, the displacement of the mean position of the wall upon increase of the intensity of the noise is not necessarily monotonous and may instead display changes of direction. Both facts actually reflect the existence of several mechanisms leading to the rupture of force balance, which tend to displace the mean position of the wall towards different directions and display different robustness against an increase of the intensity of Brownian noise. This work therefore provides a clear illustration of the fact that driving an autonomous system towards (or away from) thermodynamic equilibrium may not be a straightforward process, but may instead proceed through the variations of the relative weights of several conflicting mechanisms.
Collapse
Affiliation(s)
- Marc Joyeux
- LIPHY, Université Grenoble Alpes and CNRS, Grenoble, France
| |
Collapse
|
44
|
Alarcón F, Valeriani C, Pagonabarraga I. Morphology of clusters of attractive dry and wet self-propelled spherical particle suspensions. SOFT MATTER 2017; 13:814-826. [PMID: 28066850 DOI: 10.1039/c6sm01752e] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In order to assess the effect of hydrodynamics in the assembly of active attractive spheres, we simulate a semi-dilute suspension of attractive self-propelled spherical particles in a quasi-two dimensional geometry comparing the case with and without hydrodynamics interactions. To start with, independent of the presence of hydrodynamics, we observe that depending on the ratio between attraction and propulsion, particles either coarsen or aggregate forming finite-size clusters. Focusing on the clustering regime, we characterize two different cluster parameters, i.e. their morphology and orientational order, and compare the case when active particles behave either as pushers or pullers (always in the regime where inter-particle attractions compete with self-propulsion). Studying cluster phases for squirmers with respect to those obtained for active Brownian disks (indicated as ABPs), we have shown that hydrodynamics alone can sustain a cluster phase of active swimmers (pullers), while ABPs form cluster phases due to the competition between attraction and self-propulsion. The structural properties of the cluster phases of squirmers and ABPs are similar, although squirmers show sensitivity to active stresses. Active Brownian disks resemble weakly pusher squirmer suspensions in terms of cluster size distribution, structure of the radius of gyration on the cluster size and degree of cluster polarity.
Collapse
Affiliation(s)
- Francisco Alarcón
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, C. Martí Franqués 1, 08028-Barcelona, Spain and University of Barcelona Institute of Complex Systems (UBICS), Universitat de Barcelona, Barcelona, Spain
| | - Chantal Valeriani
- Departamento de Fisica Aplicada I, Facultad de Ciencias Fisica, Universidad Complutense de Madrid, 28040 Madrid, Spain.
| | - Ignacio Pagonabarraga
- Departament de Física de la Matèria Condensada, Universitat de Barcelona, C. Martí Franqués 1, 08028-Barcelona, Spain and University of Barcelona Institute of Complex Systems (UBICS), Universitat de Barcelona, Barcelona, Spain
| |
Collapse
|
45
|
Takatori SC, Brady JF. Superfluid Behavior of Active Suspensions from Diffusive Stretching. PHYSICAL REVIEW LETTERS 2017; 118:018003. [PMID: 28106451 DOI: 10.1103/physrevlett.118.018003] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2016] [Indexed: 06/06/2023]
Abstract
The current understanding is that the non-Newtonian rheology of active matter suspensions is governed by fluid-mediated hydrodynamic interactions associated with active self-propulsion. Here we discover an additional contribution to the suspension shear stress that predicts both thickening and thinning behavior, even when there is no nematic ordering of the microswimmers with the imposed flow. A simple micromechanical model of active Brownian particles in homogeneous shear flow reveals the existence of off-diagonal shear components in the swim stress tensor, which are independent of hydrodynamic interactions and fluid disturbances. Theoretical predictions from our model are consistent with existing experimental measurements of the shear viscosity of active suspensions, but also suggest new behavior not predicted by conventional models.
Collapse
Affiliation(s)
- S C Takatori
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - J F Brady
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| |
Collapse
|
46
|
Lee CF. Interface stability, interface fluctuations, and the Gibbs-Thomson relationship in motility-induced phase separations. SOFT MATTER 2017; 13:376-385. [PMID: 27925630 DOI: 10.1039/c6sm01978a] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Minimal models of self-propelled particles with short-range volume exclusion interactions have been shown to exhibit the signatures of phase separation. Here I show that the observed interfacial stability and fluctuations in motility-induced phase separations (MIPS) can be explained by modeling the microscopic dynamics of the active particles in the interfacial region. In addition, I demonstrate the validity of the Gibbs-Thomson relationship in MIPS, which provides a functional relationship between the size of a condensed drop and its surrounding vapor concentration. As a result, the late-stage coarsening dynamics of MIPS at vanishing supersaturation follows the classic Lifshitz-Slyozov scaling law.
Collapse
Affiliation(s)
- Chiu Fan Lee
- Department of Bioengineering, Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
| |
Collapse
|
47
|
Shin J, Cherstvy AG, Kim WK, Zaburdaev V. Elasticity-based polymer sorting in active fluids: a Brownian dynamics study. Phys Chem Chem Phys 2017; 19:18338-18347. [DOI: 10.1039/c7cp02947k] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different.
Collapse
Affiliation(s)
- Jaeoh Shin
- Max Planck Institute for the Physics of Complex Systems
- 01187 Dresden
- Germany
| | - Andrey G. Cherstvy
- Institute for Physics & Astronomy
- University of Potsdam
- 14476 Potsdam-Golm
- Germany
| | - Won Kyu Kim
- Institut für Weiche Materie and Funktionale Materialen
- Helmholtz-Zentrum Berlin
- 14109 Berlin
- Germany
| | - Vasily Zaburdaev
- Max Planck Institute for the Physics of Complex Systems
- 01187 Dresden
- Germany
| |
Collapse
|
48
|
Patch A, Yllanes D, Marchetti MC. Kinetics of motility-induced phase separation and swim pressure. Phys Rev E 2017; 95:012601. [PMID: 28208385 DOI: 10.1103/physreve.95.012601] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2016] [Indexed: 06/06/2023]
Abstract
Active Brownian particles (ABPs) represent a minimal model of active matter consisting of self-propelled spheres with purely repulsive interactions and rotational noise. Here we examine the pressure of ABPs in two dimensions in both closed boxes and systems with periodic boundary conditions and show that its nonmonotonic behavior with density is a general property of ABPs and is not the result of finite-size effects. We correlate the time evolution of the mean pressure towards its steady-state value with the kinetics of motility-induced phase separation. For parameter values corresponding to phase-separated steady states, we identify two dynamical regimes. The pressure grows monotonically in time during the initial regime of rapid cluster formation, overshooting its steady-state value and then quickly relaxing to it, and remains constant during the subsequent slower period of cluster coalescence and coarsening. The overshoot is a distinctive feature of active systems.
Collapse
Affiliation(s)
- Adam Patch
- Department of Physics and Soft Matter Program, Syracuse University, Syracuse, New York 13244, USA
| | - David Yllanes
- Department of Physics and Soft Matter Program, Syracuse University, Syracuse, New York 13244, USA
- Instituto de Biocomputación y Física de Sistemas Complejos (BIFI), 50009 Zaragoza, Spain
| | - M Cristina Marchetti
- Department of Physics and Soft Matter Program, Syracuse University, Syracuse, New York 13244, USA
| |
Collapse
|
49
|
Nikola N, Solon AP, Kafri Y, Kardar M, Tailleur J, Voituriez R. Active Particles with Soft and Curved Walls: Equation of State, Ratchets, and Instabilities. PHYSICAL REVIEW LETTERS 2016; 117:098001. [PMID: 27610886 DOI: 10.1103/physrevlett.117.098001] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Indexed: 06/06/2023]
Abstract
We study, from first principles, the pressure exerted by an active fluid of spherical particles on general boundaries in two dimensions. We show that, despite the nonuniform pressure along curved walls, an equation of state is recovered upon a proper spatial averaging. This holds even in the presence of pairwise interactions between particles or when asymmetric walls induce ratchet currents, which are accompanied by spontaneous shear stresses on the walls. For flexible obstacles, the pressure inhomogeneities lead to a modulational instability as well as to the spontaneous motion of short semiflexible filaments. Finally, we relate the force exerted on objects immersed in active baths to the particle flux they generate around them.
Collapse
Affiliation(s)
| | - Alexandre P Solon
- Université Paris Diderot, Sorbonne Paris Cité, MSC, UMR 7057 CNRS, 75205 Paris, France
- Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Yariv Kafri
- Department of Physics, Technion, Haifa 32000, Israel
| | - Mehran Kardar
- Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Julien Tailleur
- Université Paris Diderot, Sorbonne Paris Cité, MSC, UMR 7057 CNRS, 75205 Paris, France
| | - Raphaël Voituriez
- Laboratoire de Physique Théorique de la Matière Condensée, UMR 7600 CNRS /UPMC, 4 Place Jussieu, 75255 Paris Cedex, France
- Laboratoire Jean Perrin, UMR 8237 CNRS /UPMC, 4 Place Jussieu, 75255 Paris Cedex, France
| |
Collapse
|
50
|
Mallory SA, Cacciuto A. Activity-assisted self-assembly of colloidal particles. Phys Rev E 2016; 94:022607. [PMID: 27627360 DOI: 10.1103/physreve.94.022607] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2016] [Indexed: 06/06/2023]
Abstract
We outline a basic strategy of how self-propulsion can be used to improve the yield of a typical colloidal self-assembly process. The success of this approach is predicated on the thoughtful design of the colloidal building block as well as how self-propulsion is endowed to the particle. As long as a set of criteria are satisfied, it is possible to significantly increase the rate of self-assembly, and greatly expand the window in parameter space where self-assembly can occur. In addition, we show that by tuning the relative on-off time of the self-propelling force it is possible to modulate the effective speed of the colloids allowing for further optimization of the self-assembly process.
Collapse
Affiliation(s)
- S A Mallory
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
| | - A Cacciuto
- Department of Chemistry, Columbia University, 3000 Broadway, New York, New York 10027, USA
| |
Collapse
|