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Chauhan K, Neiman AB, Tass PA. Synaptic reorganization of synchronized neuronal networks with synaptic weight and structural plasticity. PLoS Comput Biol 2024; 20:e1012261. [PMID: 38980898 PMCID: PMC11259284 DOI: 10.1371/journal.pcbi.1012261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 07/19/2024] [Accepted: 06/20/2024] [Indexed: 07/11/2024] Open
Abstract
Abnormally strong neural synchronization may impair brain function, as observed in several brain disorders. We computationally study how neuronal dynamics, synaptic weights, and network structure co-emerge, in particular, during (de)synchronization processes and how they are affected by external perturbation. To investigate the impact of different types of plasticity mechanisms, we combine a network of excitatory integrate-and-fire neurons with different synaptic weight and/or structural plasticity mechanisms: (i) only spike-timing-dependent plasticity (STDP), (ii) only homeostatic structural plasticity (hSP), i.e., without weight-dependent pruning and without STDP, (iii) a combination of STDP and hSP, i.e., without weight-dependent pruning, and (iv) a combination of STDP and structural plasticity (SP) that includes hSP and weight-dependent pruning. To accommodate the diverse time scales of neuronal firing, STDP, and SP, we introduce a simple stochastic SP model, enabling detailed numerical analyses. With tools from network theory, we reveal that structural reorganization may remarkably enhance the network's level of synchrony. When weaker contacts are preferentially eliminated by weight-dependent pruning, synchrony is achieved with significantly sparser connections than in randomly structured networks in the STDP-only model. In particular, the strengthening of contacts from neurons with higher natural firing rates to those with lower rates and the weakening of contacts in the opposite direction, followed by selective removal of weak contacts, allows for strong synchrony with fewer connections. This activity-led network reorganization results in the emergence of degree-frequency, degree-degree correlations, and a mixture of degree assortativity. We compare the stimulation-induced desynchronization of synchronized states in the STDP-only model (i) with the desynchronization of models (iii) and (iv). The latter require stimuli of significantly higher intensity to achieve long-term desynchronization. These findings may inform future pre-clinical and clinical studies with invasive or non-invasive stimulus modalities aiming at inducing long-lasting relief of symptoms, e.g., in Parkinson's disease.
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Affiliation(s)
- Kanishk Chauhan
- Department of Physics and Astronomy, Ohio University, Athens, Ohio, United States of America
- Neuroscience Program, Ohio University, Athens, Ohio, United States of America
| | - Alexander B. Neiman
- Department of Physics and Astronomy, Ohio University, Athens, Ohio, United States of America
- Neuroscience Program, Ohio University, Athens, Ohio, United States of America
| | - Peter A. Tass
- Department of Neurosurgery, Stanford University, Stanford, California, United States of America
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Rajagopal K, Ramadoss J, He S, Duraisamy P, Karthikeyan A. Obstacle induced spiral waves in a multilayered Huber-Braun (HB) neuron model. Cogn Neurodyn 2023; 17:277-291. [PMID: 36704626 PMCID: PMC9871137 DOI: 10.1007/s11571-022-09785-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 01/05/2022] [Accepted: 01/20/2022] [Indexed: 01/29/2023] Open
Abstract
Various dynamical properties of four-dimensional mammalian cold receptor model have been discussed widely in the literature considering noise and temperature as important parameters of discussion. Though various spiking and bursting behaviors of the neuron under various noise and temperature conditions studied for a single neuron, no much discussions have been done on the collective behavior. We investigate the collective behavior of these temperature dependent stochastic neurons and unlike the neuron models when forced by periodic external force there is no wave reentry or spiral waves in the network. Hence, we introduce obstacle in the network and depending on the orientation and size of the introduced obstacle, we could show their effects on the wave reentry in the network. Various significant discussions are produced in this paper to confirm that obstacles placed parallel to the wave entry affects the excitability of the tissues significantly compared to those obstacles place perpendicular. We could also show that those obstacles which are lesser in dimensions doesn't affect the excitabilities and hence doesn't contribute for wave reentry. We introduce a new technique to identify wave reentry and spiral waves using the period of individual nodes is proposed. This technique could help us identify even the lowest of excitability change which cannot be seen when using spatiotemporal snapshots.
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Affiliation(s)
| | - Janarthanan Ramadoss
- Centre for Artificial Intelligence, Chennai Institute of Technology, Chennai, India
| | - Shaobo He
- School of Physics and Electronics, Central South University, Changsha, 410083 China
| | - Prakash Duraisamy
- Centre for Nonlinear Systems, Chennai Institute of Technology, Chennai, India
| | - Anitha Karthikeyan
- Nonlinear Systems and Applications, Faculty of Electrical and Electronics Engineering, Ton Duc Thang University, Ho Chi Minh City, Vietnam
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3
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He S, Rajagopal K, Karthikeyan A, Srinivasan A. A discrete Huber-Braun neuron model: from nodal properties to network performance. Cogn Neurodyn 2023; 17:301-310. [PMID: 36704635 PMCID: PMC9871134 DOI: 10.1007/s11571-022-09806-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 03/15/2022] [Accepted: 03/30/2022] [Indexed: 01/29/2023] Open
Abstract
Many of the well-known neuron models are continuous time systems with complex mathematical definitions. Literatures have shown that a discrete mathematical model can effectively replicate the complete dynamical behaviour of a neuron with much reduced complexity. Hence, we propose a new discrete neuron model derived from the Huber-Braun neuron with two additional slow and subthreshold currents alongside the ion channel currents. We have also introduced temperature dependent ion channels to study its effects on the firing pattern of the neuron. With bifurcation and Lyapunov exponents we showed the chaotic and periodic regions of the discrete model. Further to study the complexity of the neuron model, we have used the sample entropy algorithm. Though the individual neuron analysis gives us an idea about the dynamical properties, it's the collective behaviour which decides the overall behavioural pattern of the neuron. Hence, we investigate the spatiotemporal behaviour of the discrete neuron model in single- and two-layer network. We have considered obstacle as an important factor which changes the excitability of the neurons in the network. Literatures have shown that spiral waves can play a positive role in breaking through quiescent areas of the brain as a pacemaker by creating a coherence resonance behaviour. Hence, we are interested in studying the induced spiral waves in the network. In this condition when an obstacle is introduced the wave propagation is disturbed and we could see multiple wave re-entry and spiral waves. In a two-layer network when the obstacle is considered only in one layer and stimulus applied to the layer having the obstacle, the wave re-entry is seen in both the layer though the other layer is not exposed to obstacle. But when both the layers are inserted with an obstacle and stimuli also applied to the layers, they behave like independent layers with no coupling effect. In a two-layer network, stimulus play an important role in spatiotemporal dynamics of the network. Supplementary Information The online version contains supplementary material available at 10.1007/s11571-022-09806-1.
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Affiliation(s)
- Shaobo He
- School of Physics and Electronics, Central South University, Changsha, 410083 China
| | | | - Anitha Karthikeyan
- Department of Electronics and Communication Engineering, Prathyusha Engineering College, Chennai, India
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Qiu S, Sun K, Di Z. Long-range connections are crucial for synchronization transition in a computational model of Drosophila brain dynamics. Sci Rep 2022; 12:20104. [PMID: 36418353 PMCID: PMC9684149 DOI: 10.1038/s41598-022-17544-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 07/27/2022] [Indexed: 11/24/2022] Open
Abstract
The synchronization transition type has been the focus of attention in recent years because it is associated with many functional characteristics of the brain. In this paper, the synchronization transition in neural networks with sleep-related biological drives in Drosophila is investigated. An electrical synaptic neural network is established to research the difference between the synchronization transition of the network during sleep and wake, in which neurons regularly spike during sleep and chaotically spike during wake. The synchronization transition curves are calculated mainly using the global instantaneous order parameters S. The underlying mechanisms and types of synchronization transition during sleep are different from those during wake. During sleep, regardless of the network structure, a frustrated (discontinuous) transition can be observed. Moreover, the phenomenon of quasi periodic partial synchronization is observed in ring-shaped regular network with and without random long-range connections. As the network becomes dense, the synchronization of the network only needs to slightly increase the coupling strength g. While during wake, the synchronization transition of the neural network is very dependent on the network structure, and three mechanisms of synchronization transition have emerged: discontinuous synchronization (explosive synchronization and frustrated synchronization), and continuous synchronization. The random long-range connections is the main topological factor that plays an important role in the resulting synchronization transition. Furthermore, similarities and differences are found by comparing synchronization transition research for the Hodgkin-Huxley neural network in the beta-band and gammma-band, which can further improve the synchronization phase transition research of biologically motivated neural networks. A complete research framework can also be used to study coupled nervous systems, which can be extended to general coupled dynamic systems.
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Affiliation(s)
- Shuihan Qiu
- grid.20513.350000 0004 1789 9964International Academic Center of Complex Systems, Beijing Normal University, Zhuhai, 519087 China ,grid.20513.350000 0004 1789 9964School of Systems Science, Beijing Normal University, Beijing, 100875 China
| | - Kaijia Sun
- grid.20513.350000 0004 1789 9964School of Systems Science, Beijing Normal University, Beijing, 100875 China
| | - Zengru Di
- grid.20513.350000 0004 1789 9964International Academic Center of Complex Systems, Beijing Normal University, Zhuhai, 519087 China ,grid.20513.350000 0004 1789 9964School of Systems Science, Beijing Normal University, Beijing, 100875 China
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A Model for Evolutionary Structural Plasticity and Synchronization of a Network of Neurons. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2021; 2021:9956319. [PMID: 34221108 PMCID: PMC8225422 DOI: 10.1155/2021/9956319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 05/12/2021] [Accepted: 06/01/2021] [Indexed: 11/18/2022]
Abstract
A model of time-dependent structural plasticity for the synchronization of neuron networks is presented. It is known that synchronized oscillations reproduce structured communities, and this synchronization is transient since it can be enhanced or suppressed, and the proposed model reproduces this characteristic. The evolutionary behavior of the couplings is comparable to those of a network of biological neurons. In the structural network, the physical connections of axons and dendrites between neurons are modeled, and the evolution in the connections depends on the neurons' potential. Moreover, it is shown that the coupling force's function behaves as an adaptive controller that leads the neurons in the network to synchronization. The change in the node's degree shows that the network exhibits time-dependent structural plasticity, achieved through the evolutionary or adaptive change of the coupling force between the nodes. The coupling force function is based on the computed magnitude of the membrane potential deviations with its neighbors and a threshold that determines the neuron's connections. These rule the functional network structure along the time.
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Boaretto B, Manchein C, Prado T, Lopes S. The role of individual neuron ion conductances in the synchronization processes of neuron networks. Neural Netw 2021; 137:97-105. [DOI: 10.1016/j.neunet.2021.01.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 01/19/2021] [Accepted: 01/21/2021] [Indexed: 12/28/2022]
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Tumulty JS, Royster M, Cruz L. Columnar grouping preserves synchronization in neuronal networks with distance-dependent time delays. Phys Rev E 2021; 101:022408. [PMID: 32168702 DOI: 10.1103/physreve.101.022408] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Accepted: 01/10/2020] [Indexed: 11/07/2022]
Abstract
Neuronal connectivity at the cellular level in the cerebral cortex is far from random, with characteristics that point to a hierarchical design with intricately connected neuronal clusters. Here we investigate computationally the effects of varying neuronal cluster connectivity on network synchronization for two different spatial distributions of clusters: one where clusters are arranged in columns in a grid and the other where neurons from different clusters are spatially intermixed. We characterize each case by measuring the degree of neuronal spiking synchrony as a function of the number of connections per neuron and the degree of intercluster connectivity. We find that in both cases as the number of connections per neuron increases, there is an asynchronous to synchronous transition dependent only on intrinsic parameters of the biophysical model. We also observe in both cases that with very low intercluster connectivity clusters have independent firing dynamics yielding a low degree of synchrony. More importantly, we find that for a high number of connections per neuron but intermediate intercluster connectivity, the two spatial distributions of clusters differ in their response where the clusters in a grid have a higher degree of synchrony than the clusters that are intermixed.
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Affiliation(s)
- Joseph S Tumulty
- Department of Physics, Drexel University, 3141 Chestnut Street, Philadelphia, Pennsylvania 19104, United States
| | - Michael Royster
- Department of Physics, Drexel University, 3141 Chestnut Street, Philadelphia, Pennsylvania 19104, United States
| | - Luis Cruz
- Department of Physics, Drexel University, 3141 Chestnut Street, Philadelphia, Pennsylvania 19104, United States
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8
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Cluster burst synchronization in a scale-free network of inhibitory bursting neurons. Cogn Neurodyn 2019; 14:69-94. [PMID: 32015768 DOI: 10.1007/s11571-019-09546-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Revised: 06/03/2019] [Accepted: 07/01/2019] [Indexed: 10/26/2022] Open
Abstract
We consider a scale-free network of inhibitory Hindmarsh-Rose (HR) bursting neurons, and make a computational study on coupling-induced cluster burst synchronization by varying the average coupling strength J 0 . For sufficiently small J 0 , non-cluster desynchronized states exist. However, when passing a critical point J c ∗ ( ≃ 0.16 ) , the whole population is segregated into 3 clusters via a constructive role of synaptic inhibition to stimulate dynamical clustering between individual burstings, and thus 3-cluster desynchronized states appear. As J 0 is further increased and passes a lower threshold J l ∗ ( ≃ 0.78 ) , a transition to 3-cluster burst synchronization occurs due to another constructive role of synaptic inhibition to favor population synchronization. In this case, HR neurons in each cluster make burstings every 3rd cycle of the instantaneous burst rate R w ( t ) of the whole population, and exhibit burst synchronization. However, as J 0 passes an intermediate threshold J m ∗ ( ≃ 5.2 ) , HR neurons fire burstings intermittently at a 4th cycle of R w ( t ) via burst skipping rather than at its 3rd cycle, and hence they begin to make intermittent hoppings between the 3 clusters. Due to such intermittent intercluster hoppings via burst skippings, the 3 clusters become broken up (i.e., the 3 clusters are integrated into a single one). However, in spite of such break-up (i.e., disappearance) of the 3-cluster states, (non-cluster) burst synchronization persists in the whole population, which is well visualized in the raster plot of burst onset times where bursting stripes (composed of burst onset times and indicating burst synchronization) appear successively. With further increase in J 0 , intercluster hoppings are intensified, and bursting stripes also become dispersed more and more due to a destructive role of synaptic inhibition to spoil the burst synchronization. Eventually, when passing a higher threshold J h ∗ ( ≃ 17.8 ) a transition to desynchronization occurs via complete overlap between the bursting stripes. Finally, we also investigate the effects of stochastic noise on both 3-cluster burst synchronization and intercluster hoppings.
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9
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Suppression of Phase Synchronization in Scale-Free Neural Networks Using External Pulsed Current Protocols. MATHEMATICAL AND COMPUTATIONAL APPLICATIONS 2019. [DOI: 10.3390/mca24020046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The synchronization of neurons is fundamental for the functioning of the brain since its lack or excess may be related to neurological disorders, such as autism, Parkinson’s and neuropathies such as epilepsy. In this way, the study of synchronization, as well as its suppression in coupled neurons systems, consists of an important multidisciplinary research field where there are still questions to be answered. Here, through mathematical modeling and numerical approach, we simulated a neural network composed of 5000 bursting neurons in a scale-free connection scheme where non-trivial synchronization phenomenon is observed. We proposed two different protocols to the suppression of phase synchronization, which is related to deep brain stimulation and delayed feedback control. Through an optimization process, it is possible to suppression the abnormal synchronization in the neural network.
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10
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Budzinski RC, Boaretto BRR, Prado TL, Lopes SR. Phase synchronization and intermittent behavior in healthy and Alzheimer-affected human-brain-based neural network. Phys Rev E 2019; 99:022402. [PMID: 30934289 DOI: 10.1103/physreve.99.022402] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2018] [Indexed: 06/09/2023]
Abstract
We study the dynamical proprieties of phase synchronization and intermittent behavior of neural systems using a network of networks structure based on an experimentally obtained human connectome for healthy and Alzheimer-affected brains. We consider a network composed of 78 neural subareas (subnetworks) coupled with a mean-field potential scheme. Each subnetwork is characterized by a small-world topology, composed of 250 bursting neurons simulated through a Rulkov model. Using the Kuramoto order parameter we demonstrate that healthy and Alzheimer-affected brains display distinct phase synchronization and intermittence properties as a function of internal and external coupling strengths. In general, for the healthy case, each subnetwork develops a substantial level of internal synchronization before a global stable phase-synchronization state has been established. For the unhealthy case, despite the similar internal subnetwork synchronization levels, we identify higher levels of global phase synchronization occurring even for relatively small internal and external coupling. Using recurrence quantification analysis, namely the determinism of the mean-field potential, we identify regions where the healthy and unhealthy networks depict nonstationary behavior, but the results denounce the presence of a larger region or intermittent dynamics for the case of Alzheimer-affected networks. A possible theoretical explanation based on two locally stable but globally unstable states is discussed.
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Affiliation(s)
- R C Budzinski
- Departamento de Física, Universidade Federal do Paraná, 81531-980, Curitiba, PR, Brazil
| | - B R R Boaretto
- Departamento de Física, Universidade Federal do Paraná, 81531-980, Curitiba, PR, Brazil
| | - T L Prado
- Instituto de Engenharia, Ciência e Tecnologia, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 39440-000 Janaúba, MG, Brazil
| | - S R Lopes
- Departamento de Física, Universidade Federal do Paraná, 81531-980, Curitiba, PR, Brazil
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11
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Ionic Imbalances and Coupling in Synchronization of Responses in Neurons. J 2019. [DOI: 10.3390/j2010003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Most neurodegenerative diseases (NDD) are a result of changes in the chemical composition of neurons. For example, Alzheimer’s disease (AD) is the product of Aβ peptide deposition which results in changes in the ion concentration. These changes in ion concentration affect the responses of the neuron to stimuli and often result in inducing excessive excitation or inhibition. This paper investigates the dynamics of a single neuron as ion changes occur. These changes are incorporated using the Nernst equation. Within the central and peripheral nervous system, signals and hence rhythms, are propagated through the coupling of the neurons. It was found that under certain conditions the coupling strength between two neurons could mitigate changes in ion concentration. By defining the state of perfect synchrony, it was shown that the effect of ion imbalance in coupled neurons was reduced while in uncoupled neurons these changes had a more significant impact on the neuronal behavior.
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Boaretto BRR, Budzinski RC, Prado TL, Kurths J, Lopes SR. Neuron dynamics variability and anomalous phase synchronization of neural networks. CHAOS (WOODBURY, N.Y.) 2018; 28:106304. [PMID: 30384616 DOI: 10.1063/1.5023878] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2018] [Accepted: 07/05/2018] [Indexed: 06/08/2023]
Abstract
Anomalous phase synchronization describes a synchronization phenomenon occurring even for the weakly coupled network and characterized by a non-monotonous dependence of the synchronization strength on the coupling strength. Its existence may support a theoretical framework to some neurological diseases, such as Parkinson's and some episodes of seizure behavior generated by epilepsy. Despite the success of controlling or suppressing the anomalous phase synchronization in neural networks applying external perturbations or inducing ambient changes, the origin of the anomalous phase synchronization as well as the mechanisms behind the suppression is not completely known. Here, we consider networks composed of N = 2000 coupled neurons in a small-world topology for two well known neuron models, namely, the Hodgkin-Huxley-like and the Hindmarsh-Rose models, both displaying the anomalous phase synchronization regime. We show that the anomalous phase synchronization may be related to the individual behavior of the coupled neurons; particularly, we identify a strong correlation between the behavior of the inter-bursting-intervals of the neurons, what we call neuron variability, to the ability of the network to depict anomalous phase synchronization. We corroborate the ideas showing that external perturbations or ambient parameter changes that eliminate anomalous phase synchronization and at the same time promote small changes in the individual dynamics of the neurons, such that an increasing individual variability of neurons implies a decrease of anomalous phase synchronization. Finally, we demonstrate that this effect can be quantified using a well known recurrence quantifier, the "determinism." Moreover, the results obtained by the determinism are based on only the mean field potential of the network, turning these measures more suitable to be used in experimental situations.
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Affiliation(s)
- B R R Boaretto
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Brazil
| | - R C Budzinski
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Brazil
| | - T L Prado
- Instituto de Engenharia, Ciência e Tecnologia, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 39440-000 Janaúba, Brazil
| | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research - Telegraphenberg A 31, 14473 Potsdam, Germany
| | - S R Lopes
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Brazil
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Tchaptchet A. Activity patterns with silent states in a heterogeneous network of gap-junction coupled Huber-Braun model neurons. CHAOS (WOODBURY, N.Y.) 2018; 28:106327. [PMID: 30384629 DOI: 10.1063/1.5040266] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Accepted: 09/26/2018] [Indexed: 06/08/2023]
Abstract
A mathematical model of a network of nearest neighbor gap-junction coupled neurons has been used to examine the impact of neuronal heterogeneity on the networks' activity during increasing coupling strength. Heterogeneity has been introduced by Huber-Braun model neurons with randomization of the temperature as a scaling factor. This leads to neurons of an enormous diversity of impulse pattern, including burst discharges, chaotic activity, and two different types of tonic firing-all of them experimentally observed in the peripheral as well as central nervous system. When the network is composed of all these types of neurons, randomly selected, a particular phenomenon can be observed. At a certain coupling strength, the network goes into a completely silent state. Examination of voltage traces and inter-spike intervals of individual neurons suggests that all neurons, irrespective of their original pattern, go through a well-known bifurcation scenario, resembling those of single neurons especially on external current injection. All the originally spontaneously firing neurons can achieve constant membrane potentials at which all intrinsic and gap-junction currents are balanced. With limited diversity, i.e., taking out neurons of specific patterns from the lower and upper temperature range, spontaneous firing can be reinstalled with further increasing coupling strength, especially when the tonic firing regimes are missing. Reinstalled firing develops from slowly increasing subthreshold oscillations leading to tonic firing activity with already fairly well synchronized action potentials, while the subthreshold potentials can still be significantly different. Full in phase synchronization is not achieved. Additional studies are needed elucidating the underlying mechanisms and the conditions under which such particular transitions can appear.
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Affiliation(s)
- Aubin Tchaptchet
- Institute of Physiology, Faculty of Medicine, Philipps University of Marburg, 35037 Marburg, Germany
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Kim SY, Lim W. Burst synchronization in a scale-free neuronal network with inhibitory spike-timing-dependent plasticity. Cogn Neurodyn 2018; 13:53-73. [PMID: 30728871 DOI: 10.1007/s11571-018-9505-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Revised: 08/19/2018] [Accepted: 08/28/2018] [Indexed: 01/09/2023] Open
Abstract
We are concerned about burst synchronization (BS), related to neural information processes in health and disease, in the Barabási-Albert scale-free network (SFN) composed of inhibitory bursting Hindmarsh-Rose neurons. This inhibitory neuronal population has adaptive dynamic synaptic strengths governed by the inhibitory spike-timing-dependent plasticity (iSTDP). In previous works without considering iSTDP, BS was found to appear in a range of noise intensities for fixed synaptic inhibition strengths. In contrast, in our present work, we take into consideration iSTDP and investigate its effect on BS by varying the noise intensity. Our new main result is to find occurrence of a Matthew effect in inhibitory synaptic plasticity: good BS gets better via LTD, while bad BS get worse via LTP. This kind of Matthew effect in inhibitory synaptic plasticity is in contrast to that in excitatory synaptic plasticity where good (bad) synchronization gets better (worse) via LTP (LTD). We note that, due to inhibition, the roles of LTD and LTP in inhibitory synaptic plasticity are reversed in comparison with those in excitatory synaptic plasticity. Moreover, emergences of LTD and LTP of synaptic inhibition strengths are intensively investigated via a microscopic method based on the distributions of time delays between the pre- and the post-synaptic burst onset times. Finally, in the presence of iSTDP we investigate the effects of network architecture on BS by varying the symmetric attachment degree l ∗ and the asymmetry parameter Δ l in the SFN.
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Affiliation(s)
- Sang-Yoon Kim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
| | - Woochang Lim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu, 42411 Korea
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Corso G, Prado TDL, Lima GZDS, Kurths J, Lopes SR. Quantifying entropy using recurrence matrix microstates. CHAOS (WOODBURY, N.Y.) 2018; 28:083108. [PMID: 30180629 DOI: 10.1063/1.5042026] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2018] [Accepted: 07/16/2018] [Indexed: 05/28/2023]
Abstract
We conceive a new recurrence quantifier for time series based on the concept of information entropy, in which the probabilities are associated with the presence of microstates defined on the recurrence matrix as small binary submatrices. The new methodology to compute the entropy of a time series has advantages compared to the traditional entropies defined in the literature, namely, a good correlation with the maximum Lyapunov exponent of the system and a weak dependence on the vicinity threshold parameter. Furthermore, the new method works adequately even for small segments of data, bringing consistent results for short and long time series. In a case where long time series are available, the new methodology can be employed to obtain high precision results since it does not demand large computational times related to the analysis of the entire time series or recurrence matrices, as is the case of other traditional entropy quantifiers. The method is applied to discrete and continuous systems.
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Affiliation(s)
- Gilberto Corso
- Departamento de Biofísica e Farmacologia, Universidade Federal do Rio Grande do Norte, Natal 59078-970, Brazil
| | - Thiago de Lima Prado
- Instituto de Engenharia, Ciência e Tecnologia, Universidade Federal dos Vales do Jequitinhonha e Mucuri, Janaúba 39440-000, Brazil
| | | | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research, Telegraphenberg A 31, 14473 Potsdam, Germany
| | - Sergio Roberto Lopes
- Potsdam Institute for Climate Impact Research, Telegraphenberg A 31, 14473 Potsdam, Germany
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Yamamoto H, Kubota S, Shimizu FA, Hirano-Iwata A, Niwano M. Effective Subnetwork Topology for Synchronizing Interconnected Networks of Coupled Phase Oscillators. Front Comput Neurosci 2018; 12:17. [PMID: 29643771 PMCID: PMC5882810 DOI: 10.3389/fncom.2018.00017] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Accepted: 03/06/2018] [Indexed: 11/13/2022] Open
Abstract
A system consisting of interconnected networks, or a network of networks (NoN), appears diversely in many real-world systems, including the brain. In this study, we consider NoNs consisting of heterogeneous phase oscillators and investigate how the topology of subnetworks affects the global synchrony of the network. The degree of synchrony and the effect of subnetwork topology are evaluated based on the Kuramoto order parameter and the minimum coupling strength necessary for the order parameter to exceed a threshold value, respectively. In contrast to an isolated network in which random connectivity is favorable for achieving synchrony, NoNs synchronize with weaker interconnections when the degree distribution of subnetworks is heterogeneous, suggesting the major role of the high-degree nodes. We also investigate a case in which subnetworks with different average natural frequencies are coupled to show that direct coupling of subnetworks with the largest variation is effective for synchronizing the whole system. In real-world NoNs like the brain, the balance of synchrony and asynchrony is critical for its function at various spatial resolutions. Our work provides novel insights into the topological basis of coordinated dynamics in such networks.
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Affiliation(s)
- Hideaki Yamamoto
- Frontier Research Institute for Interdisciplinary Sciences, Tohoku University, Sendai, Japan
| | - Shigeru Kubota
- Graduate School of Science and Engineering, Yamagata University, Yamagata, Japan
| | - Fabio A Shimizu
- Research Institute of Electrical Communication, Tohoku University, Sendai, Japan
| | - Ayumi Hirano-Iwata
- Research Institute of Electrical Communication, Tohoku University, Sendai, Japan.,Advanced Institute for Materials Research, Tohoku University, Sendai, Japan
| | - Michio Niwano
- Research Institute of Electrical Communication, Tohoku University, Sendai, Japan
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17
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Effect of spike-timing-dependent plasticity on stochastic burst synchronization in a scale-free neuronal network. Cogn Neurodyn 2018; 12:315-342. [PMID: 29765480 DOI: 10.1007/s11571-017-9470-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2017] [Revised: 11/29/2017] [Accepted: 12/26/2017] [Indexed: 01/02/2023] Open
Abstract
We consider an excitatory population of subthreshold Izhikevich neurons which cannot fire spontaneously without noise. As the coupling strength passes a threshold, individual neurons exhibit noise-induced burstings. This neuronal population has adaptive dynamic synaptic strengths governed by the spike-timing-dependent plasticity (STDP). However, STDP was not considered in previous works on stochastic burst synchronization (SBS) between noise-induced burstings of sub-threshold neurons. Here, we study the effect of additive STDP on SBS by varying the noise intensity D in the Barabási-Albert scale-free network (SFN). One of our main findings is a Matthew effect in synaptic plasticity which occurs due to a positive feedback process. Good burst synchronization (with higher bursting measure) gets better via long-term potentiation (LTP) of synaptic strengths, while bad burst synchronization (with lower bursting measure) gets worse via long-term depression (LTD). Consequently, a step-like rapid transition to SBS occurs by changing D, in contrast to a relatively smooth transition in the absence of STDP. We also investigate the effects of network architecture on SBS by varying the symmetric attachment degree [Formula: see text] and the asymmetry parameter [Formula: see text] in the SFN, and Matthew effects are also found to occur by varying [Formula: see text] and [Formula: see text]. Furthermore, emergences of LTP and LTD of synaptic strengths are investigated in details via our own microscopic methods based on both the distributions of time delays between the burst onset times of the pre- and the post-synaptic neurons and the pair-correlations between the pre- and the post-synaptic instantaneous individual burst rates (IIBRs). Finally, a multiplicative STDP case (depending on states) with soft bounds is also investigated in comparison with the additive STDP case (independent of states) with hard bounds. Due to the soft bounds, a Matthew effect with some quantitative differences is also found to occur for the case of multiplicative STDP.
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Wang YW, Yang W, Xiao JW, Zeng ZG. Impulsive Multisynchronization of Coupled Multistable Neural Networks With Time-Varying Delay. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2017; 28:1560-1571. [PMID: 27071198 DOI: 10.1109/tnnls.2016.2544788] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
This paper studies the synchronization problem of coupled delayed multistable neural networks (NNs) with directed topology. To begin with, several sufficient conditions are developed in terms of algebraic inequalities such that every subnetwork has multiple locally exponentially stable periodic orbits or equilibrium points. Then two new concepts named dynamical multisynchronization (DMS) and static multisynchronization (SMS) are introduced to describe the two novel kinds of synchronization manifolds. Using the impulsive control strategy and the Razumikhin-type technique, some sufficient conditions for both the DMS and the SMS of the controlled coupled delayed multistable NNs with fixed and switching topologies are derived, respectively. Simulation examples are presented to illustrate the effectiveness of the proposed results.
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Budzinski RC, Boaretto BRR, Prado TL, Lopes SR. Detection of nonstationary transition to synchronized states of a neural network using recurrence analyses. Phys Rev E 2017; 96:012320. [PMID: 29347270 DOI: 10.1103/physreve.96.012320] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2017] [Indexed: 06/07/2023]
Abstract
We study the stability of asymptotic states displayed by a complex neural network. We focus on the loss of stability of a stationary state of networks using recurrence quantifiers as tools to diagnose local and global stabilities as well as the multistability of a coupled neural network. Numerical simulations of a neural network composed of 1024 neurons in a small-world connection scheme are performed using the model of Braun et al. [Int. J. Bifurcation Chaos 08, 881 (1998)IJBEE40218-127410.1142/S0218127498000681], which is a modified model from the Hodgkin-Huxley model [J. Phys. 117, 500 (1952)]. To validate the analyses, the results are compared with those produced by Kuramoto's order parameter [Chemical Oscillations, Waves, and Turbulence (Springer-Verlag, Berlin Heidelberg, 1984)]. We show that recurrence tools making use of just integrated signals provided by the networks, such as local field potential (LFP) (LFP signals) or mean field values bring new results on the understanding of neural behavior occurring before the synchronization states. In particular we show the occurrence of different stationary and nonstationarity asymptotic states.
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Affiliation(s)
- R C Budzinski
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Paraná, Brazil
| | - B R R Boaretto
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Paraná, Brazil
| | - T L Prado
- Instituto de Engenharia, Ciência e Tecnologia, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 39100-000 Janaúba, Minas Gerais, Brazil
| | - S R Lopes
- Departamento de Física, Universidade Federal do Paraná, 81531-980 Curitiba, Paraná, Brazil
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20
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Kim SY, Lim W. Effect of intermodular connection on fast sparse synchronization in clustered small-world neural networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:052716. [PMID: 26651732 DOI: 10.1103/physreve.92.052716] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2015] [Indexed: 06/05/2023]
Abstract
We consider a clustered network with small-world subnetworks of inhibitory fast spiking interneurons and investigate the effect of intermodular connection on the emergence of fast sparsely synchronized rhythms by varying both the intermodular coupling strength J(inter) and the average number of intermodular links per interneuron M(syn)(inter). In contrast to the case of nonclustered networks, two kinds of sparsely synchronized states such as modular and global synchronization are found. For the case of modular sparse synchronization, the population behavior reveals the modular structure, because the intramodular dynamics of subnetworks make some mismatching. On the other hand, in the case of global sparse synchronization, the population behavior is globally identical, independently of the cluster structure, because the intramodular dynamics of subnetworks make perfect matching. We introduce a realistic cross-correlation modularity measure, representing the matching degree between the instantaneous subpopulation spike rates of the subnetworks, and examine whether the sparse synchronization is global or modular. Depending on its magnitude, the intermodular coupling strength J(inter) seems to play "dual" roles for the pacing between spikes in each subnetwork. For large J(inter), due to strong inhibition it plays a destructive role to "spoil" the pacing between spikes, while for small J(inter) it plays a constructive role to "favor" the pacing between spikes. Through competition between the constructive and the destructive roles of J(inter), there exists an intermediate optimal J(inter) at which the pacing degree between spikes becomes maximal. In contrast, the average number of intermodular links per interneuron M(syn)(inter) seems to play a role just to favor the pacing between spikes. With increasing M(syn)(inter), the pacing degree between spikes increases monotonically thanks to the increase in the degree of effectiveness of global communication between spikes. Furthermore, we employ the realistic sub- and whole-population order parameters, based on the instantaneous sub- and whole-population spike rates, to determine the threshold values for the synchronization-unsynchronization transition in the sub- and whole populations, and the degrees of global and modular sparse synchronization are also measured in terms of the realistic sub- and whole-population statistical-mechanical spiking measures defined by considering both the occupation and the pacing degrees of spikes. It is expected that our results could have implications for the role of the brain plasticity in some functional behaviors associated with population synchronization.
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Affiliation(s)
- Sang-Yoon Kim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu 705-115, Korea
| | - Woochang Lim
- Institute for Computational Neuroscience and Department of Science Education, Daegu National University of Education, Daegu 705-115, Korea
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Liu H, Song Y, Xue F, Li X. Effects of bursting dynamic features on the generation of multi-clustered structure of neural network with symmetric spike-timing-dependent plasticity learning rule. CHAOS (WOODBURY, N.Y.) 2015; 25:113108. [PMID: 26627568 DOI: 10.1063/1.4935281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
In this paper, the generation of multi-clustered structure of self-organized neural network with different neuronal firing patterns, i.e., bursting or spiking, has been investigated. The initially all-to-all-connected spiking neural network or bursting neural network can be self-organized into clustered structure through the symmetric spike-timing-dependent plasticity learning for both bursting and spiking neurons. However, the time consumption of this clustering procedure of the burst-based self-organized neural network (BSON) is much shorter than the spike-based self-organized neural network (SSON). Our results show that the BSON network has more obvious small-world properties, i.e., higher clustering coefficient and smaller shortest path length than the SSON network. Also, the results of larger structure entropy and activity entropy of the BSON network demonstrate that this network has higher topological complexity and dynamical diversity, which benefits for enhancing information transmission of neural circuits. Hence, we conclude that the burst firing can significantly enhance the efficiency of clustering procedure and the emergent clustered structure renders the whole network more synchronous and therefore more sensitive to weak input. This result is further confirmed from its improved performance on stochastic resonance. Therefore, we believe that the multi-clustered neural network which self-organized from the bursting dynamics has high efficiency in information processing.
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Affiliation(s)
- Hui Liu
- Key Laboratory of Dependable Service Computing in Cyber Physical Society of Ministry of Education, Chongqing University, Chongqing 400044, China
| | - Yongduan Song
- Key Laboratory of Dependable Service Computing in Cyber Physical Society of Ministry of Education, Chongqing University, Chongqing 400044, China
| | - Fangzheng Xue
- Key Laboratory of Dependable Service Computing in Cyber Physical Society of Ministry of Education, Chongqing University, Chongqing 400044, China
| | - Xiumin Li
- Key Laboratory of Dependable Service Computing in Cyber Physical Society of Ministry of Education, Chongqing University, Chongqing 400044, China
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22
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Follmann R, Rosa E, Stein W. Dynamics of signal propagation and collision in axons. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:032707. [PMID: 26465498 DOI: 10.1103/physreve.92.032707] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2015] [Indexed: 06/05/2023]
Abstract
Long-range communication in the nervous system is usually carried out with the propagation of action potentials along the axon of nerve cells. While typically thought of as being unidirectional, it is not uncommon for axonal propagation of action potentials to happen in both directions. This is the case because action potentials can be initiated at multiple "ectopic" positions along the axon. Two ectopic action potentials generated at distinct sites, and traveling toward each other, will collide. As neuronal information is encoded in the frequency of action potentials, action potential collision and annihilation may affect the way in which neuronal information is received, processed, and transmitted. We investigate action potential propagation and collision using an axonal multicompartment model based on the Hodgkin-Huxley equations. We characterize propagation speed, refractory period, excitability, and action potential collision for slow (type I) and fast (type II) axons. In addition, our studies include experimental measurements of action potential propagation in axons of two biological systems. Both computational and experimental results unequivocally indicate that colliding action potentials do not pass each other; they are reciprocally annihilated.
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Affiliation(s)
- Rosangela Follmann
- School of Biological Sciences, Illinois State University, Normal, Illinois 61790, USA
| | - Epaminondas Rosa
- Department of Physics, Illinois State University, Normal, Illinois 61790, USA
| | - Wolfgang Stein
- School of Biological Sciences, Illinois State University, Normal, Illinois 61790, USA
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23
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Do Brain Networks Evolve by Maximizing Their Information Flow Capacity? PLoS Comput Biol 2015; 11:e1004372. [PMID: 26317592 PMCID: PMC4552863 DOI: 10.1371/journal.pcbi.1004372] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2015] [Accepted: 06/02/2015] [Indexed: 11/19/2022] Open
Abstract
We propose a working hypothesis supported by numerical simulations that brain networks evolve based on the principle of the maximization of their internal information flow capacity. We find that synchronous behavior and capacity of information flow of the evolved networks reproduce well the same behaviors observed in the brain dynamical networks of Caenorhabditis elegans and humans, networks of Hindmarsh-Rose neurons with graphs given by these brain networks. We make a strong case to verify our hypothesis by showing that the neural networks with the closest graph distance to the brain networks of Caenorhabditis elegans and humans are the Hindmarsh-Rose neural networks evolved with coupling strengths that maximize information flow capacity. Surprisingly, we find that global neural synchronization levels decrease during brain evolution, reflecting on an underlying global no Hebbian-like evolution process, which is driven by no Hebbian-like learning behaviors for some of the clusters during evolution, and Hebbian-like learning rules for clusters where neurons increase their synchronization.
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Ferrari FAS, Viana RL, Lopes SR, Stoop R. Phase synchronization of coupled bursting neurons and the generalized Kuramoto model. Neural Netw 2015; 66:107-18. [PMID: 25828961 DOI: 10.1016/j.neunet.2015.03.003] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2014] [Revised: 02/24/2015] [Accepted: 03/03/2015] [Indexed: 11/30/2022]
Abstract
Bursting neurons fire rapid sequences of action potential spikes followed by a quiescent period. The basic dynamical mechanism of bursting is the slow currents that modulate a fast spiking activity caused by rapid ionic currents. Minimal models of bursting neurons must include both effects. We considered one of these models and its relation with a generalized Kuramoto model, thanks to the definition of a geometrical phase for bursting and a corresponding frequency. We considered neuronal networks with different connection topologies and investigated the transition from a non-synchronized to a partially phase-synchronized state as the coupling strength is varied. The numerically determined critical coupling strength value for this transition to occur is compared with theoretical results valid for the generalized Kuramoto model.
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Affiliation(s)
- F A S Ferrari
- Department of Physics, Federal University of Paraná, 81531-990 Curitiba, Paraná, Brazil
| | - R L Viana
- Department of Physics, Federal University of Paraná, 81531-990 Curitiba, Paraná, Brazil.
| | - S R Lopes
- Department of Physics, Federal University of Paraná, 81531-990 Curitiba, Paraná, Brazil
| | - R Stoop
- Institute of Neuroinformatics, University of Zürich and Eidgenössische Technische Hochschule Zürich, 8057 Zürich, Switzerland
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