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Yamaguchi YY, Terada Y. Reconstruction of phase dynamics from macroscopic observations based on linear and nonlinear response theories. Phys Rev E 2024; 109:024217. [PMID: 38491619 DOI: 10.1103/physreve.109.024217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 01/22/2024] [Indexed: 03/18/2024]
Abstract
We propose a method to reconstruct the phase dynamics in rhythmical interacting systems from macroscopic responses to weak inputs by developing linear and nonlinear response theories, which predict the responses in a given system. By solving an inverse problem, the method infers an unknown system: the natural frequency distribution, the coupling function, and the time delay which is inevitable in real systems. In contrast to previous methods, our method requires neither strong invasiveness nor microscopic observations. We demonstrate that the method reconstructs two phase systems from observed responses accurately. The qualitative methodological advantages demonstrated by our quantitative numerical examinations suggest its broad applicability in various fields, including brain systems, which are often observed through macroscopic signals such as electroencephalograms and functional magnetic response imaging.
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Affiliation(s)
| | - Yu Terada
- Department of Neurobiology, University of California San Diego, La Jolla, California 92093, USA
- Institute for Physics of Intelligence, Department of Physics, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
- Laboratory for Neural Computation and Adaptation, RIKEN Center for Brain Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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2
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Xu C, Jin X, Wu Y. Relaxation dynamics of phase oscillators with generic heterogeneous coupling. Phys Rev E 2023; 107:024206. [PMID: 36932595 DOI: 10.1103/physreve.107.024206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 02/01/2023] [Indexed: 06/18/2023]
Abstract
The coupled phase oscillator model serves as a paradigm that has been successfully used to shed light on the collective dynamics occurring in large ensembles of interacting units. It was widely known that the system experiences a continuous (second-order) phase transition to synchronization by gradually increasing the homogeneous coupling among the oscillators. As the interest in exploring synchronized dynamics continues to grow, the heterogeneous patterns between phase oscillators have received ample attention during the past years. Here, we consider a variant of the Kuramoto model with quenched disorder in their natural frequencies and coupling. Correlating these two types of heterogeneity via a generic weighted function, we systematically investigate the impacts of the heterogeneous strategies, the correlation function, and the natural frequency distribution on the emergent dynamics. Importantly, we develop an analytical treatment for capturing the essential dynamical properties of the equilibrium states. In particular, we uncover that the critical threshold corresponding to the onset of synchronization is unaffected by the location of the inhomogeneity, which, however, does depend crucially on the value of the correlation function at its center. Furthermore, we reveal that the relaxation dynamics of the incoherent state featuring the responses to external perturbations is significantly shaped by all the considered effects, thereby leading to various decaying mechanisms of the order parameters in the subcritical region. Moreover, we untangle that synchronization is facilitated by the out-coupling strategy in the supercritical region. Our study is a step forward in highlighting the potential importance of the inhomogeneous patterns involved in the complex systems, and could thus provide theoretical insights for profoundly understanding the generic statistical mechanical properties of the steady states toward synchronization.
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Affiliation(s)
- Can Xu
- Institute of Systems Science and College of Information Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Xin Jin
- School of Physics and Electronic Engineering, Jiangsu Normal University, Xuzhou 221116, China
| | - Yonggang Wu
- School of Mathematical Sciences, Huaqiao University, Quanzhou 362021, China
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3
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Strength-dependent perturbation of whole-brain model working in different regimes reveals the role of fluctuations in brain dynamics. PLoS Comput Biol 2022; 18:e1010662. [PMID: 36322525 PMCID: PMC9629648 DOI: 10.1371/journal.pcbi.1010662] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 10/17/2022] [Indexed: 01/15/2023] Open
Abstract
Despite decades of research, there is still a lack of understanding of the role and generating mechanisms of the ubiquitous fluctuations and oscillations found in recordings of brain dynamics. Here, we used whole-brain computational models capable of presenting different dynamical regimes to reproduce empirical data's turbulence level. We showed that the model's fluctuations regime fitted to turbulence more faithfully reproduces the empirical functional connectivity compared to oscillatory and noise regimes. By applying global and local strength-dependent perturbations and subsequently measuring the responsiveness of the model, we revealed each regime's computational capacity demonstrating that brain dynamics is shifted towards fluctuations to provide much-needed flexibility. Importantly, fluctuation regime stimulation in a brain region within a given resting state network modulates that network, aligned with previous empirical and computational studies. Furthermore, this framework generates specific, testable empirical predictions for human stimulation studies using strength-dependent rather than constant perturbation. Overall, the whole-brain models fitted to the level of empirical turbulence together with functional connectivity unveil that the fluctuation regime best captures empirical data, and the strength-dependent perturbative framework demonstrates how this regime provides maximal flexibility to the human brain.
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4
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Escrichs A, Perl YS, Uribe C, Camara E, Türker B, Pyatigorskaya N, López-González A, Pallavicini C, Panda R, Annen J, Gosseries O, Laureys S, Naccache L, Sitt JD, Laufs H, Tagliazucchi E, Kringelbach ML, Deco G. Unifying turbulent dynamics framework distinguishes different brain states. Commun Biol 2022; 5:638. [PMID: 35768641 PMCID: PMC9243255 DOI: 10.1038/s42003-022-03576-6] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Accepted: 06/10/2022] [Indexed: 12/21/2022] Open
Abstract
Significant advances have been made by identifying the levels of synchrony of the underlying dynamics of a given brain state. This research has demonstrated that non-conscious dynamics tend to be more synchronous than in conscious states, which are more asynchronous. Here we go beyond this dichotomy to demonstrate that different brain states are underpinned by dissociable spatiotemporal dynamics. We investigated human neuroimaging data from different brain states (resting state, meditation, deep sleep and disorders of consciousness after coma). The model-free approach was based on Kuramoto's turbulence framework using coupled oscillators. This was extended by a measure of the information cascade across spatial scales. Complementarily, the model-based approach used exhaustive in silico perturbations of whole-brain models fitted to these measures. This allowed studying of the information encoding capabilities in given brain states. Overall, this framework demonstrates that elements from turbulence theory provide excellent tools for describing and differentiating between brain states.
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Grants
- A.E and Y.S.P. are supported by the HBP SGA3 Human Brain Project Specific Grant Agreement 3 (grant agreement no. 945539), funded by the EU H2020 FET Flagship programme. Y.S.P is supported by European Union’s Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant 896354. G.D. is supported Spanish national research project (ref. PID2019-105772GB-I00 MCIU AEI) funded by the Spanish Ministry of Science, Innovation and Universities (MCIU), State Research Agency (AEI); HBP SGA3 Human Brain Project Specific Grant Agreement 3 (grant agreement no. 945539), funded by the EU H2020 FET Flagship programme; SGR Research Support Group support (ref. 2017 SGR 1545), funded by the Catalan Agency for Management of University and Research Grants (AGAUR); Neurotwin Digital twins for model-driven non-invasive electrical brain stimulation (grant agreement ID: 101017716) funded by the EU H2020 FET Proactive programme; euSNN European School of Network Neuroscience (grant agreement ID: 860563) funded by the EU H2020 MSCA-ITN Innovative Training Networks; CECH The Emerging Human Brain Cluster (Id. 001-P-001682) within the framework of the European Research Development Fund Operational Program of Catalonia 2014-2020; Brain-Connects: Brain Connectivity during Stroke Recovery and Rehabilitation (id. 201725.33) funded by the Fundacio La Marato TV3; Corticity, FLAG–ERA JTC 2017 (ref. PCI2018-092891) funded by the Spanish Ministry of Science, Innovation and Universities (MCIU), State Research Agency (AEI). MLK is supported by the Center for Music in the Brain, funded by the Danish National Research Foundation (DNRF117), and Centre for Eudaimonia and Human Flourishing at Linacre College funded by the Pettit and Carlsberg Foundations. The study was supported by the University and University Hospital of Liège, the Belgian National Funds for Scientific Research (FRS-FNRS), the European Space Agency (ESA) and the Belgian Federal Science Policy Office (BELSPO) in the framework of the PRODEX Programme, the BIAL Foundation, the Mind Science Foundation, the fund Generet of the King Baudouin Foundation, the Mind-Care foundation and AstraZeneca Foundation, the National Natural Science Foundation of China (Joint Research Project 81471100) and the European Foundation of Biomedical Research FERB Onlus. RP is research fellow, OG is research associate, and SL is research director at FRS-FNRS. The authors thank all the patients and participants, the whole staff from the Radiodiagnostic and Nuclear departments of the University Hospital of Liège.
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Affiliation(s)
- Anira Escrichs
- Computational Neuroscience Group, Center for Brain and Cognition, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Catalonia, Spain.
| | - Yonatan Sanz Perl
- Computational Neuroscience Group, Center for Brain and Cognition, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Catalonia, Spain.
- Universidad de San Andrés, Buenos Aires, Argentina.
- Institut du Cerveau et de la Moelle épinière, ICM, Paris, France.
| | - Carme Uribe
- Medical Psychology Unit, Department of Medicine, Institute of Neuroscience, University of Barcelona, Barcelona, Catalonia, Spain
- Institute of Biomedical Research August Pi i Sunyer (IDIBAPS), Barcelona, Catalonia, Spain
| | - Estela Camara
- Cognition and Brain Plasticity Unit, Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain
- Department of Cognition, Development and Educational Psychology, University of Barcelona, Barcelona, Spain
| | - Basak Türker
- Institut du Cerveau et de la Moelle épinière, ICM, Paris, France
- Inserm U 1127, Paris, France
- CNRS UMR 7225, Paris, France
| | - Nadya Pyatigorskaya
- Institut du Cerveau et de la Moelle épinière, ICM, Paris, France
- Inserm U 1127, Paris, France
- CNRS UMR 7225, Paris, France
- Department of Neuroradiology, AP-HP, Hôpital Pitié-Salpêtrière, Sorbonne Université, Paris, France
| | - Ane López-González
- Computational Neuroscience Group, Center for Brain and Cognition, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Catalonia, Spain
| | - Carla Pallavicini
- Fundación para la Lucha contra las Enfermedades Neurológicas de la Infancia (FLENI), Buenos Aires, Argentina
- Department of Physics, University of Buenos Aires, Buenos Aires, Argentina
| | - Rajanikant Panda
- Coma Science Group, GIGA Consciousness, University of Liège, Liège, Belgium
- Centre du Cerveau, University Hospital of Liège, Liège, Belgium
| | - Jitka Annen
- Coma Science Group, GIGA Consciousness, University of Liège, Liège, Belgium
- Centre du Cerveau, University Hospital of Liège, Liège, Belgium
| | - Olivia Gosseries
- Coma Science Group, GIGA Consciousness, University of Liège, Liège, Belgium
- Centre du Cerveau, University Hospital of Liège, Liège, Belgium
| | - Steven Laureys
- Coma Science Group, GIGA Consciousness, University of Liège, Liège, Belgium
- Centre du Cerveau, University Hospital of Liège, Liège, Belgium
- Joint International Research Unit on Consciousness, CERVO Brain Research Centre, U Laval CANADA, Québec, QC, Canada
- International Consciousness Science Institute, Hangzhou Normal University, Hangzhou, China
| | - Lionel Naccache
- Institut du Cerveau et de la Moelle épinière, ICM, Paris, France
- Inserm U 1127, Paris, France
- CNRS UMR 7225, Paris, France
| | - Jacobo D Sitt
- Institut du Cerveau et de la Moelle épinière, ICM, Paris, France
- Inserm U 1127, Paris, France
- CNRS UMR 7225, Paris, France
| | - Helmut Laufs
- Department of Neurology, Christian Albrechts University, Kiel, Germany
- Department of Neurology and Brain Imaging Center, Goethe University, Frankfurt am Main, Germany
| | - Enzo Tagliazucchi
- Department of Physics, University of Buenos Aires, Buenos Aires, Argentina
- Latin American Brain Health Institute (BrainLat), Universidad Adolfo Ibañez, Santiago, Chile
| | - Morten L Kringelbach
- Department of Psychiatry, University of Oxford, Oxford, UK.
- Center for Music in the Brain, Department of Clinical Medicine, Aarhus University, DK, Jutland, Denmark.
- Centre for Eudaimonia and Human Flourishing, University of Oxford, Oxford, UK.
| | - Gustavo Deco
- Computational Neuroscience Group, Center for Brain and Cognition, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Catalonia, Spain.
- Institució Catalana de la Recerca i Estudis Avancats (ICREA), Barcelona, Catalonia, Spain.
- Department of Neuropsychology, Max Planck Institute for human Cognitive and Brain Sciences, Leipzig, Germany.
- School of Psychological Sciences, Monash University, Melbourne, Australia.
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5
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Yoneda R, Harada K, Yamaguchi YY. Critical exponents in coupled phase-oscillator models on small-world networks. Phys Rev E 2021; 102:062212. [PMID: 33465963 DOI: 10.1103/physreve.102.062212] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 11/23/2020] [Indexed: 11/07/2022]
Abstract
A coupled phase-oscillator model consists of phase oscillators, each of which has the natural frequency obeying a probability distribution and couples with other oscillators through a given periodic coupling function. This type of model is widely studied since it describes the synchronization transition, which emerges between the nonsynchronized state and partially synchronized states. The synchronization transition is characterized by several critical exponents, and we focus on the critical exponent defined by coupling strength dependence of the order parameter for revealing universality classes. In a typical interaction represented by the perfect graph, an infinite number of universality classes is yielded by dependency on the natural frequency distribution and the coupling function. Since the synchronization transition is also observed in a model on a small-world network, whose number of links is proportional to the number of oscillators, a natural question is whether the infinite number of universality classes remains in small-world networks irrespective of the order of links. Our numerical results suggest that the number of universality classes is reduced to one and the critical exponent is shared in the considered models having coupling functions up to second harmonics with unimodal and symmetric natural frequency distributions.
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Affiliation(s)
- Ryosuke Yoneda
- Graduate School of Informatics, Kyoto University, Kyoto 606-8501, Japan
| | - Kenji Harada
- Graduate School of Informatics, Kyoto University, Kyoto 606-8501, Japan
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Xu C, Gao J, Xiang H, Jia W, Guan S, Zheng Z. Dynamics of phase oscillators with generalized frequency-weighted coupling. Phys Rev E 2017; 94:062204. [PMID: 28085426 DOI: 10.1103/physreve.94.062204] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2016] [Indexed: 11/07/2022]
Abstract
Heterogeneous coupling patterns among interacting elements are ubiquitous in real systems ranging from physics, chemistry to biology communities, which have attracted much attention during recent years. In this paper, we extend the Kuramoto model by considering a particular heterogeneous coupling scheme in an ensemble of phase oscillators, where each oscillator pair interacts with different coupling strength that is weighted by a general function of the natural frequency. The Kuramoto theory for the transition to synchronization can be explicitly generalized, such as the expression for the critical coupling strength. Also, a self-consistency approach is developed to predict the stationary states in the thermodynamic limit. Moreover, Landau damping effects are further revealed by means of linear stability analysis and resonance poles theory below the critical threshold, which turns to be far more generic. Our theoretical analysis and numerical results are consistent with each other, which can help us understand the synchronization transition in general networks with heterogenous couplings.
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Affiliation(s)
- Can Xu
- Department of Physics and the Beijing-Hong Kong-Singapore Joint Center for Nonlinear and Complex Systems (Beijing), Beijing Normal University, Beijing 100875, China.,Institute of Systems Science and College of Information Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Jian Gao
- Department of Physics and the Beijing-Hong Kong-Singapore Joint Center for Nonlinear and Complex Systems (Beijing), Beijing Normal University, Beijing 100875, China.,Johann Bernoulli Institute for Mathematics and Computer Science, University of Groningen, Groningen, P.O. Box 407, 9700 AK, The Netherlands
| | - Hairong Xiang
- Department of Physics and the Beijing-Hong Kong-Singapore Joint Center for Nonlinear and Complex Systems (Beijing), Beijing Normal University, Beijing 100875, China
| | - Wenjing Jia
- Department of Physics and the Beijing-Hong Kong-Singapore Joint Center for Nonlinear and Complex Systems (Beijing), Beijing Normal University, Beijing 100875, China
| | - Shuguang Guan
- Department of Physics, East China Normal University, Shanghai 200241, China
| | - Zhigang Zheng
- Institute of Systems Science and College of Information Science and Engineering, Huaqiao University, Xiamen 361021, China
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Kryukov AK, Petrov VS, Osipov GV, Kurths J. Multistability of synchronous regimes in rotator ensembles. CHAOS (WOODBURY, N.Y.) 2015; 25:123121. [PMID: 26723160 DOI: 10.1063/1.4938181] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We study collective dynamics in rotator ensembles and focus on the multistability of synchronous regimes in a chain of coupled rotators. We provide a detailed analysis of the number of coexisting regimes and estimate in particular, the synchronization boundary for different types of individual frequency distribution. The number of wave-based regimes coexisting for the same parameters and its dependence on the chain length are estimated. We give an analytical estimation for the synchronization frequency of the in-phase regime for a uniform individual frequency distribution.
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Affiliation(s)
- A K Kryukov
- Department of Control Theory, Nizhny Novgorod State University, 23, Gagarin Avenue, 603950 Nizhny Novgorod, Russia
| | - V S Petrov
- Department of Control Theory, Nizhny Novgorod State University, 23, Gagarin Avenue, 603950 Nizhny Novgorod, Russia
| | - G V Osipov
- Department of Control Theory, Nizhny Novgorod State University, 23, Gagarin Avenue, 603950 Nizhny Novgorod, Russia
| | - J Kurths
- Institute of Applied Physics, Russian Academy of Sciences, 603950 Nizhny Novgorod, Russia
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Hong H, Chaté H, Tang LH, Park H. Finite-size scaling, dynamic fluctuations, and hyperscaling relation in the Kuramoto model. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 92:022122. [PMID: 26382359 DOI: 10.1103/physreve.92.022122] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2015] [Indexed: 06/05/2023]
Abstract
We revisit the Kuramoto model to explore the finite-size scaling (FSS) of the order parameter and its dynamic fluctuations near the onset of the synchronization transition, paying particular attention to effects induced by the randomness of the intrinsic frequencies of oscillators. For a population of size N, we study two ways of sampling the intrinsic frequencies according to the same given unimodal distribution g(ω). In the "random" case, frequencies are generated independently in accordance with g(ω), which gives rise to oscillator number fluctuation within any given frequency interval. In the "regular" case, the N frequencies are generated in a deterministic manner that minimizes the oscillator number fluctuations, leading to quasiuniformly spaced frequencies in the population. We find that the two samplings yield substantially different finite-size properties with clearly distinct scaling exponents. Moreover, the hyperscaling relation between the order parameter and its fluctuations is valid in the regular case, but it is violated in the random case. In this last case, a self-consistent mean-field theory that completely ignores dynamic fluctuations correctly predicts the FSS exponent of the order parameter but not its critical amplitude.
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Affiliation(s)
- Hyunsuk Hong
- Department of Physics and Research Institute of Physics and Chemistry, Chonbuk National University, Jeonju 561-756, Korea
| | - Hugues Chaté
- Service de Physique de l'Etat Condensé, CEA-Saclay, CNRS UMR 3680, 91191 Gif-sur-Yvette, France
- Beijing Computational Science Research Center, Beijing 100084, China
| | - Lei-Han Tang
- Beijing Computational Science Research Center, Beijing 100084, China
- Department of Physics, Hong Kong Baptist University, Kowloon Tong, Hong Kong SAR, China
| | - Hyunggyu Park
- School of Physics and QUC, Korea Institute for Advanced Study, Seoul 130-722, Korea
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