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Lopes MA, Goltsev AV. Distinct dynamical behavior in Erdős-Rényi networks, regular random networks, ring lattices, and all-to-all neuronal networks. Phys Rev E 2019; 99:022303. [PMID: 30934305 DOI: 10.1103/physreve.99.022303] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2018] [Indexed: 01/20/2023]
Abstract
Neuronal network dynamics depends on network structure. In this paper we study how network topology underpins the emergence of different dynamical behaviors in neuronal networks. In particular, we consider neuronal network dynamics on Erdős-Rényi (ER) networks, regular random (RR) networks, ring lattices, and all-to-all networks. We solve analytically a neuronal network model with stochastic binary-state neurons in all the network topologies, except ring lattices. Given that apart from network structure, all four models are equivalent, this allows us to understand the role of network structure in neuronal network dynamics. While ER and RR networks are characterized by similar phase diagrams, we find strikingly different phase diagrams in the all-to-all network. Neuronal network dynamics is not only different within certain parameter ranges, but it also undergoes different bifurcations (with a richer repertoire of bifurcations in ER and RR compared to all-to-all networks). This suggests that local heterogeneity in the ratio between excitation and inhibition plays a crucial role on emergent dynamics. Furthermore, we also observe one subtle discrepancy between ER and RR networks, namely, ER networks undergo a neuronal activity jump at lower noise levels compared to RR networks, presumably due to the degree heterogeneity in ER networks that is absent in RR networks. Finally, a comparison between network oscillations in RR networks and ring lattices shows the importance of small-world properties in sustaining stable network oscillations.
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Affiliation(s)
- M A Lopes
- Living Systems Institute, University of Exeter, Devon EX4, United Kingdom.,Centre for Biomedical Modelling and Analysis, University of Exeter, Devon EX4, United Kingdom.,EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Devon EX4, United Kingdom.,Department of Physics and I3N, University of Aveiro, 3810-193 Aveiro, Portugal
| | - A V Goltsev
- Department of Physics and I3N, University of Aveiro, 3810-193 Aveiro, Portugal.,A.F. Ioffe Physico-Technical Institute, 194021 St. Petersburg, Russia
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Lopes MA, Richardson MP, Abela E, Rummel C, Schindler K, Goodfellow M, Terry JR. An optimal strategy for epilepsy surgery: Disruption of the rich-club? PLoS Comput Biol 2017; 13:e1005637. [PMID: 28817568 PMCID: PMC5560820 DOI: 10.1371/journal.pcbi.1005637] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2017] [Accepted: 06/20/2017] [Indexed: 01/05/2023] Open
Abstract
Surgery is a therapeutic option for people with epilepsy whose seizures are not controlled by anti-epilepsy drugs. In pre-surgical planning, an array of data modalities, often including intra-cranial EEG, is used in an attempt to map regions of the brain thought to be crucial for the generation of seizures. These regions are then resected with the hope that the individual is rendered seizure free as a consequence. However, post-operative seizure freedom is currently sub-optimal, suggesting that the pre-surgical assessment may be improved by taking advantage of a mechanistic understanding of seizure generation in large brain networks. Herein we use mathematical models to uncover the relative contribution of regions of the brain to seizure generation and consequently which brain regions should be considered for resection. A critical advantage of this modeling approach is that the effect of different surgical strategies can be predicted and quantitatively compared in advance of surgery. Herein we seek to understand seizure generation in networks with different topologies and study how the removal of different nodes in these networks reduces the occurrence of seizures. Since this a computationally demanding problem, a first step for this aim is to facilitate tractability of this approach for large networks. To do this, we demonstrate that predictions arising from a neural mass model are preserved in a lower dimensional, canonical model that is quicker to simulate. We then use this simpler model to study the emergence of seizures in artificial networks with different topologies, and calculate which nodes should be removed to render the network seizure free. We find that for scale-free and rich-club networks there exist specific nodes that are critical for seizure generation and should therefore be removed, whereas for small-world networks the strategy should instead focus on removing sufficient brain tissue. We demonstrate the validity of our approach by analysing intra-cranial EEG recordings from a database comprising 16 patients who have undergone epilepsy surgery, revealing rich-club structures within the obtained functional networks. We show that the postsurgical outcome for these patients was better when a greater proportion of the rich club was removed, in agreement with our theoretical predictions.
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Affiliation(s)
- Marinho A. Lopes
- Living Systems Institute, University of Exeter, Exeter, United Kingdom
- Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
- * E-mail:
| | - Mark P. Richardson
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
- Institute of Psychiatry, Psychology and Neuroscience, Kings College London, London, United Kingdom
| | - Eugenio Abela
- Institute of Psychiatry, Psychology and Neuroscience, Kings College London, London, United Kingdom
- Support Center for Advanced Neuroimaging (SCAN), University of Bern, Bern, Switzerland
| | - Christian Rummel
- Support Center for Advanced Neuroimaging (SCAN), University of Bern, Bern, Switzerland
| | | | - Marc Goodfellow
- Living Systems Institute, University of Exeter, Exeter, United Kingdom
- Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
| | - John R. Terry
- Living Systems Institute, University of Exeter, Exeter, United Kingdom
- Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
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Pietras B, Daffertshofer A. Ott-Antonsen attractiveness for parameter-dependent oscillatory systems. CHAOS (WOODBURY, N.Y.) 2016; 26:103101. [PMID: 27802676 DOI: 10.1063/1.4963371] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
The Ott-Antonsen (OA) ansatz [Ott and Antonsen, Chaos 18, 037113 (2008); Chaos 19, 023117 (2009)] has been widely used to describe large systems of coupled phase oscillators. If the coupling is sinusoidal and if the phase dynamics does not depend on the specific oscillator, then the macroscopic behavior of the systems can be fully described by a low-dimensional dynamics. Does the corresponding manifold remain attractive when introducing an intrinsic dependence between an oscillator's phase and its dynamics by additional, oscillator specific parameters? To answer this, we extended the OA ansatz and proved that parameter-dependent oscillatory systems converge to the OA manifold given certain conditions. Our proof confirms recent numerical findings that already hinted at this convergence. Furthermore, we offer a thorough mathematical underpinning for networks of so-called theta neurons, where the OA ansatz has just been applied. In a final step, we extend our proof by allowing for time-dependent and multi-dimensional parameters as well as for network topologies other than global coupling. This renders the OA ansatz an excellent starting point for the analysis of a broad class of realistic settings.
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Affiliation(s)
- Bastian Pietras
- Faculty of Behavioural and Movement Sciences, MOVE Research Institute Amsterdam and Institute for Brain and Behavior Amsterdam, Vrije Universiteit Amsterdam, van der Boechorststraat 9, Amsterdam 1081 BT, The Netherlands
| | - Andreas Daffertshofer
- Faculty of Behavioural and Movement Sciences, MOVE Research Institute Amsterdam and Institute for Brain and Behavior Amsterdam, Vrije Universiteit Amsterdam, van der Boechorststraat 9, Amsterdam 1081 BT, The Netherlands
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