1
|
Goswami S, Jensen S, Yang Y, Holzmann M, Pierleoni C, Ceperley DM. High temperature melting of dense molecular hydrogen from machine-learning interatomic potentials trained on quantum Monte Carlo. J Chem Phys 2025; 162:054118. [PMID: 39907135 DOI: 10.1063/5.0250686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2024] [Accepted: 01/16/2025] [Indexed: 02/06/2025] Open
Abstract
We present results and discuss methods for computing the melting temperature of dense molecular hydrogen using a machine learned model trained on quantum Monte Carlo data. In this newly trained model, we emphasize the importance of accurate total energies in the training. We integrate a two phase method for estimating the melting temperature with estimates from the Clausius-Clapeyron relation to provide a more accurate melting curve from the model. We make detailed predictions of the melting temperature, solid and liquid volumes, latent heat, and internal energy from 50 to 180 GPa for both classical hydrogen and quantum hydrogen. At pressures of roughly 173 GPa and 1635 K, we observe molecular dissociation in the liquid phase. We compare with previous simulations and experimental measurements.
Collapse
Affiliation(s)
- Shubhang Goswami
- The Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA
| | - Scott Jensen
- The Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA
| | - Yubo Yang
- Center for Computational Quantum Physics, Flatiron Institute, New York, New York 10010, USA
- Department of Physics and Astronomy, Hofstra University, Hempstead, New York 11549, USA
| | | | - Carlo Pierleoni
- Department of Physical and Chemical Sciences, University of L'Aquila, Via Vetoio 10, I-67010 L'Aquila, Italy
| | - David M Ceperley
- The Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, USA
| |
Collapse
|
2
|
Annarelli A, Alfè D, Zen A. A brief introduction to the diffusion Monte Carlo method and the fixed-node approximation. J Chem Phys 2024; 161:241501. [PMID: 39786903 DOI: 10.1063/5.0232424] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Accepted: 12/11/2024] [Indexed: 01/12/2025] Open
Abstract
Quantum Monte Carlo (QMC) methods represent a powerful family of computational techniques for tackling complex quantum many-body problems and performing calculations of stationary state properties. QMC is among the most accurate and powerful approaches to the study of electronic structure, but its application is often hindered by a steep learning curve; hence it is rarely addressed in undergraduate and postgraduate classes. This tutorial is a step toward filling this gap. We offer an introduction to the diffusion Monte Carlo (DMC) method, which aims to solve the imaginary time Schrödinger equation through stochastic sampling of the configuration space. Starting from the theoretical foundations, the discussion leads naturally to the formulation of a step-by-step algorithm. To illustrate how the method works in simplified scenarios, examples such as the harmonic oscillator and the hydrogen atom are provided. The discussion extends to the fixed-node approximation, a crucial approach for addressing the fermionic sign problem in multi-electron systems. In particular, we examine the influence of trial wave function nodal surfaces on the accuracy of DMC energy by evaluating results from a non-interacting two-fermion system. Extending the method to excited states is feasible in principle, but some additional considerations are needed, supported by practical insights. By addressing the fundamental concepts from a hands-on perspective, we hope this tutorial will serve as a valuable guide for researchers and students approaching DMC for the first time.
Collapse
Affiliation(s)
- Alfonso Annarelli
- Dipartimento di Fisica Ettore Pancini, Università di Napoli Federico II, Monte S. Angelo, I-80126 Napoli, Italy
| | - Dario Alfè
- Dipartimento di Fisica Ettore Pancini, Università di Napoli Federico II, Monte S. Angelo, I-80126 Napoli, Italy
- Department of Earth Sciences, University College London, Gower Street, London WC1E 6BT, United Kingdom
- Thomas Young Centre and London Centre for Nanotechnology, 17-19 Gordon Street, London WC1H 0AH, United Kingdom
| | - Andrea Zen
- Dipartimento di Fisica Ettore Pancini, Università di Napoli Federico II, Monte S. Angelo, I-80126 Napoli, Italy
- Department of Earth Sciences, University College London, Gower Street, London WC1E 6BT, United Kingdom
| |
Collapse
|
3
|
Landinez Borda EJ, Berard KO, Lopez A, Rubenstein B. Gaussian processes for finite size extrapolation of many-body simulations. Faraday Discuss 2024; 254:500-528. [PMID: 39282946 DOI: 10.1039/d4fd00051j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2024]
Abstract
Key to being able to accurately model the properties of realistic materials is being able to predict their properties in the thermodynamic limit. Nevertheless, because most many-body electronic structure methods scale as a high-order polynomial, or even exponentially, with system size, directly simulating large systems in their thermodynamic limit rapidly becomes computationally intractable. As a result, researchers typically estimate the properties of large systems that approach the thermodynamic limit by extrapolating the properties of smaller, computationally-accessible systems based on relatively simple scaling expressions. In this work, we employ Gaussian processes to more accurately and efficiently extrapolate many-body simulations to their thermodynamic limit. We train our Gaussian processes on Smooth Overlap of Atomic Positions (SOAP) descriptors to extrapolate the energies of one-dimensional hydrogen chains obtained using two high-accuracy many-body methods: coupled cluster theory and Auxiliary Field Quantum Monte Carlo (AFQMC). In so doing, we show that Gaussian processes trained on relatively short 10-30-atom chains can predict the energies of both homogeneous and inhomogeneous hydrogen chains in their thermodynamic limit with sub-milliHartree accuracy. Unlike standard scaling expressions, our GPR-based approach is highly generalizable given representative training data and is not dependent on systems' geometries or dimensionality. This work highlights the potential for machine learning to correct for the finite size effects that routinely complicate the interpretation of finite size many-body simulations.
Collapse
Affiliation(s)
| | - Kenneth O Berard
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA.
| | - Annette Lopez
- Department of Physics, Brown University, Providence, Rhode Island 02912, USA
| | - Brenda Rubenstein
- Department of Chemistry, Brown University, Providence, Rhode Island 02912, USA.
| |
Collapse
|
4
|
Slootman E, Poltavsky I, Shinde R, Cocomello J, Moroni S, Tkatchenko A, Filippi C. Accurate Quantum Monte Carlo Forces for Machine-Learned Force Fields: Ethanol as a Benchmark. J Chem Theory Comput 2024; 20:6020-6027. [PMID: 39003522 PMCID: PMC11270822 DOI: 10.1021/acs.jctc.4c00498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 05/31/2024] [Accepted: 06/03/2024] [Indexed: 07/15/2024]
Abstract
Quantum Monte Carlo (QMC) is a powerful method to calculate accurate energies and forces for molecular systems. In this work, we demonstrate how we can obtain accurate QMC forces for the fluxional ethanol molecule at room temperature by using either multideterminant Jastrow-Slater wave functions in variational Monte Carlo or just a single determinant in diffusion Monte Carlo. The excellent performance of our protocols is assessed against high-level coupled cluster calculations on a diverse set of representative configurations of the system. Finally, we train machine-learning force fields on the QMC forces and compare them to models trained on coupled cluster reference data, showing that a force field based on the diffusion Monte Carlo forces with a single determinant can faithfully reproduce coupled cluster power spectra in molecular dynamics simulations.
Collapse
Affiliation(s)
- E. Slootman
- MESA+
Institute for Nanotechnology, University
of Twente, P.O. Box 217,
7500 AE Enschede, The Netherlands
| | - I. Poltavsky
- Department
of Physics and Materials Science, University
of Luxembourg, L-1511 Luxembourg City, Luxembourg
| | - R. Shinde
- MESA+
Institute for Nanotechnology, University
of Twente, P.O. Box 217,
7500 AE Enschede, The Netherlands
| | - J. Cocomello
- MESA+
Institute for Nanotechnology, University
of Twente, P.O. Box 217,
7500 AE Enschede, The Netherlands
| | - S. Moroni
- CNR-IOM
DEMOCRITOS, Istituto Officina dei Materiali,
and SISSA Scuola Internazionale Superiore di Studi Avanzati, Via Bonomea 265, I-34136 Trieste, Italy
| | - A. Tkatchenko
- Department
of Physics and Materials Science, University
of Luxembourg, L-1511 Luxembourg City, Luxembourg
| | - C. Filippi
- MESA+
Institute for Nanotechnology, University
of Twente, P.O. Box 217,
7500 AE Enschede, The Netherlands
| |
Collapse
|
5
|
Yang S, Lee JU, Chang MH, Kang HG, Oda T. Improved reliability and availability of fundamental properties for all hydrogen isotopologues by Gaussian process regression using data from experiments and path-integral simulations. INTERNATIONAL JOURNAL OF HYDROGEN ENERGY 2024; 73:392-401. [DOI: 10.1016/j.ijhydene.2024.06.054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2025]
|
6
|
Hadad RE, Roy A, Rabani E, Redmer R, Baer R. Stochastic density functional theory combined with Langevin dynamics for warm dense matter. Phys Rev E 2024; 109:065304. [PMID: 39020867 DOI: 10.1103/physreve.109.065304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Accepted: 05/17/2024] [Indexed: 07/19/2024]
Abstract
This study overviews and extends a recently developed stochastic finite-temperature Kohn-Sham density functional theory to study warm dense matter using Langevin dynamics, specifically under periodic boundary conditions. The method's algorithmic complexity exhibits nearly linear scaling with system size and is inversely proportional to the temperature. Additionally, a linear-scaling stochastic approach is introduced to assess the Kubo-Greenwood conductivity, demonstrating exceptional stability for dc conductivity. Utilizing the developed tools, we investigate the equation of state, radial distribution, and electronic conductivity of hydrogen at a temperature of 30 000 K. As for the radial distribution functions, we reveal a transition of hydrogen from gaslike to liquidlike behavior as its density exceeds 4g/cm^{3}. As for the electronic conductivity as a function of the density, we identified a remarkable isosbestic point at frequencies around 7 eV, which may be an additional signature of a gas-liquid transition in hydrogen at 30 000 K.
Collapse
Affiliation(s)
| | | | - Eran Rabani
- Department of Chemistry, University of California, Berkeley, California 94720, USA; Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA; and The Raymond and Beverly Sackler Center of Computational Molecular and Materials Science, Tel Aviv University, Tel Aviv 69978, Israel
| | | | | |
Collapse
|
7
|
Zhou Y, Lopez GE, Giovambattista N. The Harmonic and Gaussian Approximations in the Potential Energy Landscape Formalism for Quantum Liquids. J Chem Theory Comput 2024; 20:1847-1861. [PMID: 38323779 PMCID: PMC11166017 DOI: 10.1021/acs.jctc.3c01085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2024]
Abstract
The potential energy landscape (PEL) formalism has been used in the past to describe the behavior of classical low-temperature liquids and glasses. Here, we extend the PEL formalism to describe the behavior of liquids and glasses that obey quantum mechanics. In particular, we focus on the (i) harmonic and (ii) Gaussian approximations of the PEL, which have been commonly used to describe classical systems, and show how these approximations can be applied to quantum liquids/glasses. Contrary to the case of classical liquids/glasses, the PEL of quantum liquids is temperature-dependent, and hence, the main expressions resulting from approximations (i) and (ii) depend on the nature (classical vs quantum) of the system. The resulting theoretical expressions from the PEL formalism are compared with results from path-integral Monte Carlo (PIMC) simulations of a monatomic model liquid. In the PIMC simulations, every atom of the quantum liquid is represented by a ring-polymer. Our PIMC simulations show that at the local minima of the PEL (inherent structures, or IS), sampled over a wide range of temperatures and volumes, the ring-polymers are collapsed. This considerably facilitates the description of quantum liquids using the PEL formalism. Specifically, the normal modes of the ring-polymer system/quantum liquid at an IS can be calculated analytically if the normal modes of the classical liquid counterpart are known (as obtained, e.g., from classical MC or molecular dynamics simulations of the corresponding atomic liquid).
Collapse
Affiliation(s)
- Yang Zhou
- Department of Physics, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States
- Ph.D. Program in Physics, The Graduate Center of the City University of New York, New York, New York 10016, United States
| | - Gustavo E Lopez
- Department of Chemistry, Lehman College of the City University of New York, Bronx, New York 10468, United States
- Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, New York, New York 10016, United States
| | - Nicolas Giovambattista
- Department of Physics, Brooklyn College of the City University of New York, Brooklyn, New York 11210, United States
- Ph.D. Program in Physics, The Graduate Center of the City University of New York, New York, New York 10016, United States
- Ph.D. Program in Chemistry, The Graduate Center of the City University of New York, New York, New York 10016, United States
| |
Collapse
|
8
|
Mouhat F, Peria M, Morresi T, Vuilleumier R, Saitta AM, Casula M. Thermal dependence of the hydrated proton and optimal proton transfer in the protonated water hexamer. Nat Commun 2023; 14:6930. [PMID: 37903819 PMCID: PMC10616126 DOI: 10.1038/s41467-023-42366-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 09/25/2023] [Indexed: 11/01/2023] Open
Abstract
Water is a key ingredient for life and plays a central role as solvent in many biochemical reactions. However, the intrinsically quantum nature of the hydrogen nucleus, revealing itself in a large variety of physical manifestations, including proton transfer, gives rise to unexpected phenomena whose description is still elusive. Here we study, by a combination of state-of-the-art quantum Monte Carlo methods and path-integral molecular dynamics, the structure and hydrogen-bond dynamics of the protonated water hexamer, the fundamental unit for the hydrated proton. We report a remarkably low thermal expansion of the hydrogen bond from zero temperature up to 300 K, owing to the presence of short-Zundel configurations, characterised by proton delocalisation and favoured by the synergy of nuclear quantum effects and thermal activation. The hydrogen bond strength progressively weakens above 300 K, when localised Eigen-like configurations become relevant. Our analysis, supported by the instanton statistics of shuttling protons, reveals that the near-room-temperature range from 250 K to 300 K is optimal for proton transfer in the protonated water hexamer.
Collapse
Affiliation(s)
- Félix Mouhat
- Saint Gobain Research Paris, 39, Quai Lucien Lefranc, 93300, Aubervilliers, France
| | - Matteo Peria
- IMPMC, Sorbonne Université, CNRS, MNHN, UMR 7590, 4 Place Jussieu, 75252, Paris, France
| | - Tommaso Morresi
- ECT*-Fondazione Bruno Kessler*, 286 Strada delle Tabarelle, 38123, Trento, Italy
| | - Rodolphe Vuilleumier
- PASTEUR, Département de Chimie, École normale supérieure, PSL Research University, Sorbonne Université, CNRS, 24 Rue Lhomond, 75005, Paris, France
| | - Antonino Marco Saitta
- IMPMC, Sorbonne Université, CNRS, MNHN, UMR 7590, 4 Place Jussieu, 75252, Paris, France
| | - Michele Casula
- IMPMC, Sorbonne Université, CNRS, MNHN, UMR 7590, 4 Place Jussieu, 75252, Paris, France.
| |
Collapse
|
9
|
Xie H, Li ZH, Wang H, Zhang L, Wang L. Deep Variational Free Energy Approach to Dense Hydrogen. PHYSICAL REVIEW LETTERS 2023; 131:126501. [PMID: 37802941 DOI: 10.1103/physrevlett.131.126501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 08/01/2023] [Accepted: 08/14/2023] [Indexed: 10/08/2023]
Abstract
We developed a deep generative model-based variational free energy approach to the equations of state of dense hydrogen. We employ a normalizing flow network to model the proton Boltzmann distribution and a fermionic neural network to model the electron wave function at given proton positions. By jointly optimizing the two neural networks we reached a comparable variational free energy to the previous coupled electron-ion Monte Carlo calculation. The predicted equation of state of dense hydrogen under planetary conditions is denser than the findings of ab initio molecular dynamics calculation and empirical chemical model. Moreover, direct access to the entropy and free energy of dense hydrogen opens new opportunities in planetary modeling and high-pressure physics research.
Collapse
Affiliation(s)
- Hao Xie
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Zi-Hang Li
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Sciences, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Han Wang
- Laboratory of Computational Physics, Institute of Applied Physics and Computational Mathematics, Fenghao East Road 2, Beijing 100094, China
| | - Linfeng Zhang
- DP Technology, Beijing 100080, China
- AI for Science Institute, Beijing 100080, China
| | - Lei Wang
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
| |
Collapse
|