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Liu D, Chen C, Zhang T. Image-Based Polygonal Lattices for Mechanical Modeling of Biological Materials: 2D Demonstrations. ACS Biomater Sci Eng 2021. [PMID: 34060803 DOI: 10.1021/acsbiomaterials.0c01772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Understanding the structure-property relationship of biological materials, such as bones, teeth, cells, and biofilms, is critical for diagnosing diseases and developing bioinspired materials and structures. The intrinsic multiphase heterogeneity with interfaces places great challenges for mechanical modeling. Here, we develop an image-based polygonal lattice model for simulating the mechanical deformation of biological materials with complicated shapes and interfaces. The proposed lattice model maintains the uniform meshes inside the homogeneous phases and restricts the irregular polygonal meshes near the boundaries or interfaces. This approach significantly simplifies the mesh generation from images of biological structures with complicated geometries. The conventional finite element simulations validate this polygonal lattice model. We further demonstrate that the image-based polygonal lattices generate meshes from images of composite structures with multiple inclusions and capture the nonlinear mechanical deformation. We conclude the paper by highlighting a few future research directions that will benefit from the functionalities of polygonal lattice modeling.
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Affiliation(s)
- Di Liu
- Department of Mechanical and Aerospace Engineering, Syracuse University, Syracuse, New York 13244, United States.,BioInspired Syracuse, Syracuse University, Syracuse, New York 13244, United States
| | - Chao Chen
- Department of Mechanical and Aerospace Engineering, Syracuse University, Syracuse, New York 13244, United States.,BioInspired Syracuse, Syracuse University, Syracuse, New York 13244, United States
| | - Teng Zhang
- Department of Mechanical and Aerospace Engineering, Syracuse University, Syracuse, New York 13244, United States.,BioInspired Syracuse, Syracuse University, Syracuse, New York 13244, United States
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2
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Pan J, Li J, Hong G, Bai J. A mapping discrete element method for nonlinear dynamics of vibrating plate-particle coupling system. POWDER TECHNOL 2021. [DOI: 10.1016/j.powtec.2021.03.022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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3
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Cui Z, Huang Y. Exploration of the Structure–Property Relationship of Polymer‐Based Composites by Monte‐Carlo‐Coupled Viscoelastic Lattice Spring Model. ADVANCED THEORY AND SIMULATIONS 2021. [DOI: 10.1002/adts.202000202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Zhiwei Cui
- Key Laboratory of Specially Functional Polymeric Materials and Related Technology School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Yongmin Huang
- Key Laboratory of Specially Functional Polymeric Materials and Related Technology School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
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4
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Afra B, Amiri Delouei A, Mostafavi M, Tarokh A. Fluid-structure interaction for the flexible filament's propulsion hanging in the free stream. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2020.114941] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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5
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Yu Y, Wang W, He H, Lu T. Modeling multiscale evolution of numerous voids in shocked brittle material. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 89:043309. [PMID: 24827366 DOI: 10.1103/physreve.89.043309] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2013] [Indexed: 06/03/2023]
Abstract
The influence of the evolution of numerous voids on macroscopic properties of materials is a multiscale problem that challenges computational research. A shock-wave compression model for brittle material, which can obtain both microscopic evolution and macroscopic shock properties, was developed using discrete element methods (lattice model). Using a model interaction-parameter-mapping procedure, qualitative features, as well as trends in the calculated shock-wave profiles, are shown to agree with experimental results. The shock wave splits into an elastic wave and a deformation wave in porous brittle materials, indicating significant shock plasticity. Void collapses in the deformation wave were the natural reason for volume shrinkage and deformation. However, media slippage and rotation deformations indicated by complex vortex patterns composed of relative velocity vectors were also confirmed as an important source of shock plasticity. With increasing pressure, the contribution from slippage deformation to the final plastic strain increased. Porosity was found to determine the amplitude of the elastic wave; porosity and shock stress together determine propagation speed of the deformation wave, as well as stress and strain on the final equilibrium state. Thus, shock behaviors of porous brittle material can be systematically designed for specific applications.
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Affiliation(s)
- Yin Yu
- National Key Laboratory of Shock Wave and Detonation Physics, Institute of Fluid Physics, CAEP, 621900, Mianyang, People's Republic of China and Department of Physics and Key Laboratory for Radiation Physics and Technology of Ministry of Education, Sichuan University, 610064, Chengdu, People's Republic of China
| | - Wenqiang Wang
- National Key Laboratory of Shock Wave and Detonation Physics, Institute of Fluid Physics, CAEP, 621900, Mianyang, People's Republic of China
| | - Hongliang He
- National Key Laboratory of Shock Wave and Detonation Physics, Institute of Fluid Physics, CAEP, 621900, Mianyang, People's Republic of China
| | - Tiecheng Lu
- Department of Physics and Key Laboratory for Radiation Physics and Technology of Ministry of Education, Sichuan University, 610064, Chengdu, People's Republic of China
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6
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Duki SF, Kolmakov GV, Yashin VV, Kowalewski T, Matyjaszewski K, Balazs AC. Modeling the nanoscratching of self-healing materials. J Chem Phys 2011; 134:084901. [DOI: 10.1063/1.3556744] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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7
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Mesoscale modeling of the influence of morphology on the mechanical properties of proton exchange membranes. POLYMER 2011. [DOI: 10.1016/j.polymer.2010.11.013] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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8
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9
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Gusev AA, Lurie SA. Loss Amplification Effect in Multiphase Materials with Viscoelastic Interfaces. Macromolecules 2009. [DOI: 10.1021/ma900426v] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Andrei A. Gusev
- Institute of Polymers, Department of Materials, ETH Zürich, 8093 Zürich, Switzerland
| | - Sergey A. Lurie
- Institute of Applied Mechanics, The Russian Academy of Sciences, 117334 Moscow, Russia
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Merabia S, Sotta P, Long DR. A Microscopic Model for the Reinforcement and the Nonlinear Behavior of Filled Elastomers and Thermoplastic Elastomers (Payne and Mullins Effects). Macromolecules 2008. [DOI: 10.1021/ma8014728] [Citation(s) in RCA: 213] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Samy Merabia
- Laboratoire de Physique des Solides, CNRS and Université de Paris XI, Bat. 510, 91405 Orsay Cédex, France, and Laboratoire Polymeres et Matériaux Avancés, CNRS/Rhodia, 85 avenue des Freres Perret, F-69192 Saint-Fons, France
| | - Paul Sotta
- Laboratoire de Physique des Solides, CNRS and Université de Paris XI, Bat. 510, 91405 Orsay Cédex, France, and Laboratoire Polymeres et Matériaux Avancés, CNRS/Rhodia, 85 avenue des Freres Perret, F-69192 Saint-Fons, France
| | - Didier R. Long
- Laboratoire de Physique des Solides, CNRS and Université de Paris XI, Bat. 510, 91405 Orsay Cédex, France, and Laboratoire Polymeres et Matériaux Avancés, CNRS/Rhodia, 85 avenue des Freres Perret, F-69192 Saint-Fons, France
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11
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12
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Gorban AN, Zinovyev AY. Elastic Maps and Nets for Approximating Principal Manifolds and Their Application to Microarray Data Visualization. LECTURE NOTES IN COMPUTATIONAL SCIENCE AND ENGINEE 2008. [DOI: 10.1007/978-3-540-73750-6_4] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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13
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Gusev AA. Micromechanical Mechanism of Reinforcement and Losses in Filled Rubbers. Macromolecules 2006. [DOI: 10.1021/ma061308z] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Andrei A. Gusev
- Institute of Polymers, Department of Materials, ETH Zürich, 8093 Zürich, Switzerland
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Long D, Sotta P. Nonlinear and Plastic Behavior of Soft Thermoplastic and Filled Elastomers Studied by Dissipative Particle Dynamics. Macromolecules 2006. [DOI: 10.1021/ma061306e] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Didier Long
- Laboratoire de Physique des Solides, Université de Paris XI/CNRS, Bât. 510, 91405 Orsay Cédex, France
| | - Paul Sotta
- Laboratoire de Physique des Solides, Université de Paris XI/CNRS, Bât. 510, 91405 Orsay Cédex, France
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Nukala PKVV, Simunović S. Comment on "finite element mapping for spring network representations of the mechanics of solids". PHYSICAL REVIEW LETTERS 2006; 96:199401; author reply 199402. [PMID: 16803149 DOI: 10.1103/physrevlett.96.199401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2005] [Indexed: 05/10/2023]
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16
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Dubus C, Sekimoto K, Fournier JB. General up to next-nearest-neighbour elasticity of triangular lattices in three dimensions. Proc Math Phys Eng Sci 2006. [DOI: 10.1098/rspa.2006.1694] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
We establish the most general form of the discrete elasticity of a two-dimensional triangular lattice embedded in three dimensions, taking into account up to next-nearest-neighbour interactions. Besides crystalline system, this is relevant to biological physics (e.g. red blood cell cytoskeleton) and soft matter (e.g. percolating gels, etc.). In order to correctly impose the rotational invariance of the bulk terms, it turns out to be necessary to take into account explicitly the elasticity associated with the vertices located at the edges of the lattice. We find that some terms that were suspected in the literature to violate rotational symmetry are, in fact, admissible.
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Affiliation(s)
- Cyril Dubus
- Laboratoire Matière et Systèmes ComplexesUMR 7057 CNRS & Université Paris 7, 2 place Jussieu, 75251 Paris cedex 05, France
- Laboratoire de Physico-Chimie ThéoriqueUMR 7083 CNRS, ESPCI, 10 rue Vauquelin, 75231 Paris cedex 05, France
| | - Ken Sekimoto
- Laboratoire Matière et Systèmes ComplexesUMR 7057 CNRS & Université Paris 7, 2 place Jussieu, 75251 Paris cedex 05, France
- Laboratoire de Physico-Chimie ThéoriqueUMR 7083 CNRS, ESPCI, 10 rue Vauquelin, 75231 Paris cedex 05, France
| | - Jean-Baptiste Fournier
- Laboratoire Matière et Systèmes ComplexesUMR 7057 CNRS & Université Paris 7, 2 place Jussieu, 75251 Paris cedex 05, France
- Laboratoire de Physico-Chimie ThéoriqueUMR 7083 CNRS, ESPCI, 10 rue Vauquelin, 75231 Paris cedex 05, France
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Alexeev A, Verberg R, Balazs AC. Motion of compliant capsules on corrugated surfaces: A means of sorting by mechanical properties. ACTA ACUST UNITED AC 2006. [DOI: 10.1002/polb.20899] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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18
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Buxton GA, Verberg R, Jasnow D, Balazs AC. Newtonian fluid meets an elastic solid: coupling lattice Boltzmann and lattice-spring models. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 71:056707. [PMID: 16089691 DOI: 10.1103/physreve.71.056707] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2004] [Indexed: 05/03/2023]
Abstract
We integrate the lattice Boltzmann model (LBM) and lattice spring model (LSM) to capture the coupling between a compliant bounding surface and the hydrodynamic response of an enclosed fluid. We focus on an elastic, spherical shell filled with a Newtonian fluid where no-slip boundary conditions induce the interaction. We calculate the "breathing mode" oscillations for this system and find good agreement with analytical solutions. Furthermore, we simulate the impact of the fluid-filled, elastic shell on a hard wall and on an adhesive surface. Understanding the dynamics of fluid-filled shells, especially near adhesive surfaces, can be particularly important in the design of microcapsules for pharmaceutical and other technological applications. Our studies reveal that the binding of these capsules to specific surfaces can be sensitive to the physical properties of both the outer shell and the enclosed fluid. The integrated LBM-LSM methodology opens up the possibility of accurately and efficiently capturing the dynamic coupling between fluid flow and a compliant bounding surface in a broad variety of systems.
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Affiliation(s)
- Gavin A Buxton
- Chemical and Petroleum Engineering Department, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA
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Buxton GA, Balazs AC. Micromechanical Simulation of the Deformation and Fracture of Polymer Blends. Macromolecules 2004. [DOI: 10.1021/ma048470r] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Gavin A. Buxton
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
| | - Anna C. Balazs
- Department of Chemical and Petroleum Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261
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