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Krishnamurthy P, Pothiraj R, Suthanthiram B, Somasundaram SM, Subbaraya U. Phylogenomic classification and synteny network analyses deciphered the evolutionary landscape of aldo-keto reductase (AKR) gene superfamily in the plant kingdom. Gene 2022; 816:146169. [PMID: 35026291 DOI: 10.1016/j.gene.2021.146169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 10/29/2021] [Accepted: 12/15/2021] [Indexed: 11/18/2022]
Abstract
Aldo-keto reductase-domain (PF00248) containing proteins (AKRs) are NAD(P)(H)-dependent oxidoreductases of a multigene superfamily that mediate versatile functions in plants ranging from detoxification, metal chelation, potassium ion efflux to specialized metabolism. To uncover the complete repertoire of AKR gene superfamily in plants, a systematic kingdom-wide identification, phylogeny reconstruction, classification and synteny network clustering analyses were performed in this study using 74 diverse plant genomes. Plant AKRs were omnipresent, legitimately classified into 4 groups (based on phylogeny) and 14 subgroups (based on the ≥ 60% of protein sequence identity). Species composition of AKR subgroups highlights their distinct emergence during plant evolution. Loss of AKR subgroups among plants was apparent and that various lineage-, order/family- and species-specific losses were observed. The subgroups IA, IVB and IVF were flourished and diversified well during plant evolution, likely related to the complexity of plant's specialized metabolism and environmental adaptation. About 65% of AKRs were in genomic synteny regions across the plant kingdom and the AKRs relevant to important functions (e.g. vitamin B6 metabolism) were in profoundly conserved angiosperm-wide synteny communities. This study underscores the evolutionary landscape of plant AKRs and provides a comprehensive resource to facilitate the functional characterization of them.
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Affiliation(s)
| | - Ramanujam Pothiraj
- Crop Improvement Division, ICAR National Research Centre for Banana, Tiruchirappalli 620 102, India
| | - Backiyarani Suthanthiram
- Crop Improvement Division, ICAR National Research Centre for Banana, Tiruchirappalli 620 102, India
| | | | - Uma Subbaraya
- Crop Improvement Division, ICAR National Research Centre for Banana, Tiruchirappalli 620 102, India
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Dominguez PG, Niittylä T. Mobile forms of carbon in trees: metabolism and transport. TREE PHYSIOLOGY 2022; 42:458-487. [PMID: 34542151 PMCID: PMC8919412 DOI: 10.1093/treephys/tpab123] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 07/16/2021] [Accepted: 09/12/2021] [Indexed: 05/26/2023]
Abstract
Plants constitute 80% of the biomass on earth, and almost two-thirds of this biomass is found in wood. Wood formation is a carbon (C)-demanding process and relies on C transport from photosynthetic tissues. Thus, understanding the transport process is of major interest for understanding terrestrial biomass formation. Here, we review the molecules and mechanisms used to transport and allocate C in trees. Sucrose is the major form in which C is transported in plants, and it is found in the phloem sap of all tree species investigated so far. However, in several tree species, sucrose is accompanied by other molecules, notably polyols and the raffinose family of oligosaccharides. We describe the molecules that constitute each of these transport groups, and their distribution across different tree species. Furthermore, we detail the metabolic reactions for their synthesis, the mechanisms by which trees load and unload these compounds in and out of the vascular system, and how they are radially transported in the trunk and finally catabolized during wood formation. We also address a particular C recirculation process between phloem and xylem that occurs in trees during the annual cycle of growth and dormancy. A search of possible evolutionary drivers behind the diversity of C-carrying molecules in trees reveals no consistent differences in C transport mechanisms between angiosperm and gymnosperm trees. Furthermore, the distribution of C forms across species suggests that climate-related environmental factors will not explain the diversity of C transport forms. However, the consideration of C-transport mechanisms in relation to tree-rhizosphere coevolution deserves further attention. To conclude the review, we identify possible future lines of research in this field.
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Affiliation(s)
- Pia Guadalupe Dominguez
- Instituto de Agrobiotecnología y Biología Molecular (IABIMO), Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Hurlingham, Buenos Aires B1686IGC, Argentina
| | - Totte Niittylä
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 90183, Sweden
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Aly R, Matzrafi M, Bari VK. Using biotechnological approaches to develop crop resistance to root parasitic weeds. PLANTA 2021; 253:97. [PMID: 33844068 DOI: 10.1007/s00425-021-03616-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2020] [Accepted: 03/25/2021] [Indexed: 06/12/2023]
Abstract
New transgenic and biotechnological approaches may serve as a key component in achieving crop resistance to root parasitic weeds. Root parasitic weeds inflict severe damage to numerous crops, reducing yield quantity and quality. A lack of new sources of resistance limits our ability to manage newly developing, more virulent races. Having no effective means to control the parasites in most crops, innovative biotechnological solutions are needed. Several novel biotechnological strategies using regulatory RNA molecules, the CRISPR/Cas9 system, and T-DNA insertions have been acknowledged for engineering resistance against parasitic weeds. Significant breakthroughs have been made over the years in deciphering the plant genome and its functions, including the genomes of parasitic weeds. However, the basis of biotechnological strategies to generate host resistance to root parasitic weeds needs to be further developed. Gene-silencing and editing tools should be used to target key processes of host-parasite interactions, such as strigolactone biosynthesis and signaling, haustorium development, and degradation and penetration of the host cell wall. In this review, we summarize and discuss the main areas of research leading to the discovery and functional analysis of genes involved in host-induced gene silencing that target key parasite genes, transgenic host modification, and host gene editing to generate sustainable resistance to root parasitic weeds.
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Affiliation(s)
- Radi Aly
- Department of Plant Pathology and Weed Research, Newe Ya'ar Research Center, Agricultural Research Organization (ARO), Ramat Yishay, Israel.
| | - Maor Matzrafi
- Department of Plant Pathology and Weed Research, Newe Ya'ar Research Center, Agricultural Research Organization (ARO), Ramat Yishay, Israel.
| | - Vinay Kumar Bari
- Department of Plant Pathology and Weed Research, Newe Ya'ar Research Center, Agricultural Research Organization (ARO), Ramat Yishay, Israel
- Department of Biochemistry, School of Basic Sciences, Central University of Punjab, VPO-Ghudda, Bathinda, India
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UV-B Radiation Affects Photosynthesis-Related Processes of Two Italian Olea europaea (L.) Varieties Differently. PLANTS 2020; 9:plants9121712. [PMID: 33291829 PMCID: PMC7762067 DOI: 10.3390/plants9121712] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Revised: 12/01/2020] [Accepted: 12/03/2020] [Indexed: 12/20/2022]
Abstract
Given the economical importance of the olive tree it is essential to study its responses to stress agents such as excessive UV-B radiation, to understand the defense mechanisms and to identify the varieties that are able to cope with it. In the light of the analysis carried out in this study, we argue that UV-B radiation represents a dangerous source of stress for the olive tree, especially in the current increasingly changing environmental conditions. Both the varieties considered (Giarraffa and Olivastra Seggianese), although resistant to the strong treatment to which they were exposed, showed, albeit in different ways and at different times, evident effects. The two varieties have different response times and the Giarraffa variety seems better suited to prolonged UV-B stress, possible due to a more efficient and quick activation of the antioxidant response (e.g., flavonoids use to counteract reactive oxygen species) and because of its capacity to maintain the photosynthetic efficiency as well as a relatively higher content of mannitol. Moreover, pigments reduction after a long period of UV-B exposure can also be an adaptation mechanism triggered by Giarraffa to reduce energy absorption under UV-B stress. Olivastra Seggianese seems less suited to overcome UV-B stress for a long period (e.g., higher reduction of Fv/Fm) and has a higher requirement for sugars (e.g., glucose) possible to counteract stress and to restore energy.
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Ramu VS, Preethi V, Nisarga KN, Srivastava KR, Sheshshayee MS, Mysore KS, Udayakumar M. Carbonyl Cytotoxicity Affects Plant Cellular Processes and Detoxifying Enzymes Scavenge These Compounds to Improve Stress Tolerance. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:6237-6247. [PMID: 32401508 DOI: 10.1021/acs.jafc.0c02005] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Oxidative stress is ubiquitous in environmental stresses and prevails over the cellular metabolic and phenotypic responses in plants. Reactive oxygen species (ROS) generated under stress affect macromolecules to form another group of toxic compounds called reactive carbonyl compounds (RCCs). These molecules have a longer half-life than ROS and cause carbonyl stress that affects cellular metabolism, cellular homeostasis, and crop productivity. The later effect of oxidative stress in terms of the generation of RCCs and glycation products and their effects on plant processes have not been explored well in plant biology. Therefore, how these molecules are produced and a few important effects of RCCs on plants have been discussed in this review article. Further, the plant adaptive detoxification mechanisms of RCCs have been discussed. The enzymes that were identified in plants to detoxify these cytotoxic compounds have broad substrate specificity and the potential for use in breeding programs. The review should provide a comprehensive understanding of the cytotoxic compounds beyond ROS and subsequently their mitigation strategies for crop improvement programs.
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Affiliation(s)
- Vemanna S Ramu
- Laboratory of Plant Functional Genomics, Regional Center for Biotechnology, Faridabad, Haryana 121001, India
| | - V Preethi
- Department of Crop Physiology, University of Agriculture Sciences, GKVK, Bengaluru 560065, India
| | - K N Nisarga
- Department of Crop Physiology, University of Agriculture Sciences, GKVK, Bengaluru 560065, India
| | | | - M S Sheshshayee
- Department of Crop Physiology, University of Agriculture Sciences, GKVK, Bengaluru 560065, India
| | | | - M Udayakumar
- Department of Crop Physiology, University of Agriculture Sciences, GKVK, Bengaluru 560065, India
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Farrokhi Z, Alizadeh H, Alizadeh H, Mehrizi FA. Host-Induced Silencing of Some Important Genes Involved in Osmoregulation of Parasitic Plant Phelipanche aegyptiaca. Mol Biotechnol 2019; 61:929-937. [PMID: 31564035 DOI: 10.1007/s12033-019-00215-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Broomrape is an obligate root-parasitic weed that acts as a competitive sink for host photoassimilates. Disruption of essential processes for growth of broomrape using host plant-mediated systemic signals can help to implement more specific and effective management plans of this parasite. Accordingly, we tested the possibility of transient silencing three involved genes (PaM6PR, PaCWI, and PaSUS1) in osmoregulation process of broomrape using syringe agroinfiltration of dsRNA constructs in tomato. The highest decrease in mRNA levels, enzyme activity, and amount of total reducing sugars was observed in Phelipanche aegyptiaca when grown on agroinfiltrated tomato plants by PaM6PR dsRNA construct than control. In addition, PaSUS1 dsRNA construct showed high reduction in mRNA abundance (32-fold fewer than control). The lowest decrease in mRNA levels was observed after infiltration of PaCWI dsRNA construct (eightfold fewer than control). While the highest reduction in PaM6PR and PaSUS1 expression levels was detected in the parasite at 3 days post-infiltration (dpi), the maximum reduction in both of the total reducing sugars amount and M6PR and SUS1 activities was observed at 8 dpi. On the contrary, CWI activity, PaCWI expression level, and amount of total reducing sugars in broomrape shoots simultaneously decreased at the day 3 after the dsRNA construct infiltration against PaCWI. On the whole, our results indicated that the three studied genes especially PaM6PR may constitute appropriate targets for the development of transgenic resistance in host plants using silencing strategy.
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Affiliation(s)
- Zahra Farrokhi
- Department of Agronomy & Plant Breeding, College of Agriculture & Natural Resources, University of Tehran, Karaj, Iran
| | - Hassan Alizadeh
- Department of Agronomy & Plant Breeding, College of Agriculture & Natural Resources, University of Tehran, Karaj, Iran.
| | - Houshang Alizadeh
- Department of Agronomy & Plant Breeding, College of Agriculture & Natural Resources, University of Tehran, Karaj, Iran
| | - Fariba Abooei Mehrizi
- Department of Agronomy & Plant Breeding, College of Agriculture & Natural Resources, University of Tehran, Karaj, Iran
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Suekawa M, Fujikawa Y, Esaka M. Two G-box-like elements essential to high gene expression of SlAKR4B in tomato leaves. Biosci Biotechnol Biochem 2018; 82:425-432. [PMID: 29384041 DOI: 10.1080/09168451.2018.1429887] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Aldo-keto reductases (AKRs) play important roles in aldehyde detoxification as well as primary and secondary metabolism in plants. We previously reported inducible expression of a Solanum lycopersicum AKR4B (SlAKR4B) in tomato leaves treated with salicylic acid and jasmonic acid, and high promoter activity of SlAKR4B in tomato leaf protoplasts. In this study, we investigated the expression response of SlAKR4B in the tomato leaves with infiltration treatment and the cis-element(s) involved in high promoter activity. Gene expression analysis in tomato leaf protoplasts and buffer-infiltrated tomato leaves suggested that cell damage caused the increased expression of SlAKR4B. Promoter activity of SlAKR4B was significantly reduced by mutation of two G-box like elements. It is suggested that the two G-box like elements are responsible for the high promoter activity.
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Affiliation(s)
- Marina Suekawa
- a Graduate School of Biosphere Sciences , Hiroshima University , Higashi-Hiroshima , Japan
| | - Yukichi Fujikawa
- a Graduate School of Biosphere Sciences , Hiroshima University , Higashi-Hiroshima , Japan
| | - Muneharu Esaka
- a Graduate School of Biosphere Sciences , Hiroshima University , Higashi-Hiroshima , Japan
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Tekaya M, El-Gharbi S, Chehab H, Attia F, Hammami M, Mechri B. Long-term field evaluation of the changes in fruit and olive oil chemical compositions after agronomic application of olive mill wastewater with rock phosphate. Food Chem 2018; 239:664-670. [PMID: 28873619 DOI: 10.1016/j.foodchem.2017.07.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Revised: 06/23/2017] [Accepted: 07/02/2017] [Indexed: 10/19/2022]
Abstract
The objectives of this study were to determine the long-term effects of agronomic application of olive mill wastewater (OMW) with rock phosphate (RP) in a field of olive trees, on olive fruits and oil quality. The results revealed that olive fruits of OMW-RP amended plants had higher contents of polyphenols and mannitol indicating that agronomic application of OMW with RP generated an oxidative stress. Land spreading of OMW with RP altered the relative proportions of individual sugars in leaves and fruits. Consequently, the oil content decreased significantly, and a marked decrease in the contents of carotenoids and chlorophylls was also observed. Changes also took place in the composition of fatty acids, particularly by the increase of linoleic acid and the decrease of oleic acid. Our results suggested that the use of OMW in combination with RP is expected to have a major negative impact on olive fruit and oil quality.
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Affiliation(s)
- Meriem Tekaya
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019 Monastir, Tunisia.
| | - Sinda El-Gharbi
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019 Monastir, Tunisia
| | - Hechmi Chehab
- The Olive Tree Institute, Unit Specializing in Sousse, Ibn Khaldoun Street B.P. 14, 4061 Sousse, Tunisia
| | - Faouzi Attia
- Agricultural Research Team, Agronutrition, Carbon, France
| | - Mohamed Hammami
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019 Monastir, Tunisia
| | - Beligh Mechri
- Laboratory of Biochemistry, USCR Mass Spectrometry, LR-NAFS/LR12ES05 Nutrition Functional Foods and Vascular Health, Faculty of Medicine, University of Monastir, 5019 Monastir, Tunisia
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Dumschott K, Richter A, Loescher W, Merchant A. Post photosynthetic carbon partitioning to sugar alcohols and consequences for plant growth. PHYTOCHEMISTRY 2017; 144:243-252. [PMID: 28985572 DOI: 10.1016/j.phytochem.2017.09.019] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Revised: 09/22/2017] [Accepted: 09/26/2017] [Indexed: 05/06/2023]
Abstract
The occurrence of sugar alcohols is ubiquitous among plants. Physiochemical properties of sugar alcohols suggest numerous primary and secondary functions in plant tissues and are often well documented. In addition to functions arising from physiochemical properties, the synthesis of sugar alcohols may have significant influence over photosynthetic, respiratory, and developmental processes owing to their function as a large sink for photosynthates. Sink strength is demonstrated by the high concentrations of sugar alcohols found in plant tissues and their ability to be readily transported. The plant scale distribution and physiochemical function of these compounds renders them strong candidates for functioning as stress metabolites. Despite this, several aspects of sugar alcohol biosynthesis and function are poorly characterised namely: 1) the quantitative characterisation of carbon flux into the sugar alcohol pool; 2) the molecular control governing sugar alcohol biosynthesis on a quantitative basis; 3) the role of sugar alcohols in plant growth and ecology; and 4) consequences of sugar alcohol synthesis for yield production and yield quality. We highlight the need to adopt new approaches to investigating sugar alcohol biosynthesis using modern technologies in gene expression, metabolic flux analysis and agronomy. Combined, these approaches will elucidate the impact of sugar alcohol biosynthesis on growth, stress tolerance, yield and yield quality.
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Affiliation(s)
- Kathryn Dumschott
- Faculty of Agriculture and Environment, The University of Sydney, Sydney, NSW, 2006, Australia.
| | - Andreas Richter
- Department of Microbiology and Ecosystem Science, University of Vienna, Vienna, Austria
| | - Wayne Loescher
- Department of Horticulture, Michigan State University, MI, USA
| | - Andrew Merchant
- Faculty of Agriculture and Environment, The University of Sydney, Sydney, NSW, 2006, Australia
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Lloret A, Martínez-Fuentes A, Agustí M, Badenes ML, Ríos G. Chromatin-associated regulation of sorbitol synthesis in flower buds of peach. PLANT MOLECULAR BIOLOGY 2017; 95:507-517. [PMID: 29038917 DOI: 10.1007/s11103-017-0669-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Accepted: 10/09/2017] [Indexed: 05/08/2023]
Abstract
PpeS6PDH gene is postulated to mediate sorbitol synthesis in flower buds of peach concomitantly with specific chromatin modifications. Perennial plants have evolved an adaptive mechanism involving protection of meristems within specialized structures named buds in order to survive low temperatures and water deprivation during winter. A seasonal period of dormancy further improves tolerance of buds to environmental stresses through specific mechanisms poorly known at the molecular level. We have shown that peach PpeS6PDH gene is down-regulated in flower buds after dormancy release, concomitantly with changes in the methylation level at specific lysine residues of histone H3 (H3K27 and H3K4) in the chromatin around the translation start site of the gene. PpeS6PDH encodes a NADPH-dependent sorbitol-6-phosphate dehydrogenase, the key enzyme for biosynthesis of sorbitol. Consistently, sorbitol accumulates in dormant buds showing higher PpeS6PDH expression. Moreover, PpeS6PDH gene expression is affected by cold and water deficit stress. Particularly, its expression is up-regulated by low temperature in buds and leaves, whereas desiccation treatment induces PpeS6PDH in buds and represses the gene in leaves. These data reveal the concurrent participation of chromatin modification mechanisms, transcriptional regulation of PpeS6PDH and sorbitol accumulation in flower buds of peach. In addition to its role as a major translocatable photosynthate in Rosaceae species, sorbitol is a widespread compatible solute and cryoprotectant, which suggests its participation in tolerance to environmental stresses in flower buds of peach.
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Affiliation(s)
- Alba Lloret
- Instituto Valenciano de Investigaciones Agrarias (IVIA), Carretera CV-315, Km 10.7, Moncada, 46113, Valencia, Spain
| | - Amparo Martínez-Fuentes
- Instituto Agroforestal Mediterráneo, Universitat Politécnica de Valéncia, Camino Vera s/n, 46022, Valencia, Spain
| | - Manuel Agustí
- Instituto Agroforestal Mediterráneo, Universitat Politécnica de Valéncia, Camino Vera s/n, 46022, Valencia, Spain
| | - María Luisa Badenes
- Instituto Valenciano de Investigaciones Agrarias (IVIA), Carretera CV-315, Km 10.7, Moncada, 46113, Valencia, Spain
| | - Gabino Ríos
- Instituto Valenciano de Investigaciones Agrarias (IVIA), Carretera CV-315, Km 10.7, Moncada, 46113, Valencia, Spain.
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Khalil SRM, Ibrahim AS, Hussien BA, Hussien EA, Tawfik MS. Cloning of a functional mannose-6-phosphate reductase (M6PR) gene homolog from Egyptian celery plants ( Apium graveolens): overexpression in non-mannitol producing plants resulted in mannitol accumulation in transgenic individuals. 3 Biotech 2017; 7:341. [PMID: 28955638 PMCID: PMC5608648 DOI: 10.1007/s13205-017-0975-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Accepted: 09/12/2017] [Indexed: 10/18/2022] Open
Abstract
Salinity is a major limiting factor affecting crops production, survival and distribution worldwide. Engineering dehydration stress tolerance in commercial crops is a trait of economic importance, especially in saline-affected areas. In this work, we are reporting the cloning of the M6PR gene homolog (encoding a key enzyme, mannose-6-phosphate reductase, for mannitol biosynthesis in celery) from Egyptian celery plants. Using RACE technique, the full-length Egyptian-M6PR gene (1333 bp) was cloned into pRI-201AN plant expression vector. Analysis of the cloned gene revealed that both American and Egyptian clones had both start and stop codons in frame and was found to be 930 base long. The newly cloned EM6PR gene was found to be 126 base longer than its American counterpart at the non-coding region. Six differences at nucleotide level between the Egyptian and American sequences were observed, three of which in the coding region resulting in three polymorphic amino acids differences (tryptophan vs. leucine, glutamine vs. histidine and isoleucine vs. leucine). The newly cloned gene was introduced to tobacco via Agrobacterium and PCR analysis of T0 plants indicated the presence of the EM6PR gene into 10 out of 38 tobacco individuals. Moreover, RT-PCR analysis confirmed the presence of EM6PR transcripts in 9 out of the 10 PCR positive plants. GC/MS analysis of some RT positive individuals indicated the accumulation of mannitol in transgenics tobacco, while mannitol was absent in non-transgenic controls.
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Affiliation(s)
- Shaimaa R. M. Khalil
- Oil Crops Biotechnology Lab, Agricultural Genetic Engineering Research Institute (AGERI), Agriculture Research Center (ARC), Giza, 12619 Egypt
| | - Amr S. Ibrahim
- Plant Genomic Laboratory, Agricultural Genetic Engineering Research Institute (AGERI), Agriculture Research Center (ARC), Giza, 12619 Egypt
| | - Basita A. Hussien
- Department of Genetics, Faculty of Agriculture, Cairo University, Giza, Egypt
| | - Ebtissam A. Hussien
- Department of Genetics, Faculty of Agriculture, Cairo University, Giza, Egypt
| | - Mohamed S. Tawfik
- Oil Crops Biotechnology Lab, Agricultural Genetic Engineering Research Institute (AGERI), Agriculture Research Center (ARC), Giza, 12619 Egypt
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Li MY, Hou XL, Wang F, Tan GF, Xu ZS, Xiong AS. Advances in the research of celery, an important Apiaceae vegetable crop. Crit Rev Biotechnol 2017; 38:172-183. [PMID: 28423952 DOI: 10.1080/07388551.2017.1312275] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Celery (Apium graveolens L.), one of the most important vegetables in Apiaceae family, is cultivated worldwide and utilized in food and cosmetic industries because it is an excellent source of vitamins, phenolic compounds, volatile oils and other nutrients. Celery extracts possess various medicinal properties, such as antibacterial, anti-inflammatory and lowering blood glucose and serum lipid levels. With the rapid advancements in molecular biology and sequencing technology, studies on celery have been performed. Numerous molecular markers and regulatory genes have been discovered and applied to improve celery. Research advances, including genetic breeding, genomics research, function genes and chemical composition, regarding celery are reviewed in this paper. Further exploration and application trends are briefly described. This review provides a reference for basic and applied research on celery, an important Apiaceae vegetable crop.
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Affiliation(s)
- Meng-Yao Li
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
| | - Xi-Lin Hou
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
| | - Feng Wang
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
| | - Guo-Fei Tan
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
| | - Zhi-Sheng Xu
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
| | - Ai-Sheng Xiong
- a State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture , Nanjing Agricultural University , Nanjing , China
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Dubey NK, Eizenberg H, Leibman D, Wolf D, Edelstein M, Abu-Nassar J, Marzouk S, Gal-On A, Aly R. Enhanced Host-Parasite Resistance Based on Down-Regulation of Phelipanche aegyptiaca Target Genes Is Likely by Mobile Small RNA. FRONTIERS IN PLANT SCIENCE 2017; 8:1574. [PMID: 28955363 PMCID: PMC5601039 DOI: 10.3389/fpls.2017.01574] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2016] [Accepted: 08/28/2017] [Indexed: 05/06/2023]
Abstract
RNA silencing refers to diverse mechanisms that control gene expression at transcriptional and post-transcriptional levels which can also be used in parasitic pathogens of plants that Broomrapes (Orobanche/Phelipanche spp.) are holoparasitic plants that subsist on the roots of a variety of agricultural crops and cause severe negative effects on the yield and yield quality of those crops. Effective methods for controlling parasitic weeds are scarce, with only a few known cases of genetic resistance. In the current study, we suggest an improved strategy for the control of parasitic weeds based on trans-specific gene-silencing of three parasite genes at once. We used two strategies to express dsRNA containing selected sequences of three Phelipanche aegyptiaca genes PaACS, PaM6PR, and PaPrx1 (pma): transient expression using Tobacco rattle virus (TRV:pma) as a virus-induced gene-silencing vector and stable expression in transgenic tomato Solanum lycopersicum (Mill.) plants harboring a hairpin construct (pBINPLUS35:pma). siRNA-mediated transgene-silencing (20-24 nt) was detected in the host plants. Our results demonstrate that the quantities of PaACS and PaM6PR transcripts from P. aegyptiaca tubercles grown on transgenic tomato or on TRV-infected Nicotiana benthamiana plants were significantly reduced. However, only partial reductions in the quantity of PaPrx1 transcripts were observed in the parasite tubercles grown on tomato and on N. benthamiana plants. Concomitant with the suppression of the target genes, there were significant decreases in the number and weight of the parasite tubercles that grew on the host plants, in both the transient and the stable experimental systems. The results of the work carried out using both strategies point to the movement of mobile exogenous siRNA from the host to the parasite, leading to the impaired expression of essential parasite target genes.
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Affiliation(s)
- Neeraj K. Dubey
- Department of Plant Pathology and Weed Research, Newe Ya’ar Research Center, Agricultural Research Organization, Volcani CenterRamat Yishay, Israel
| | - Hanan Eizenberg
- Department of Plant Pathology and Weed Research, Newe Ya’ar Research Center, Agricultural Research Organization, Volcani CenterRamat Yishay, Israel
| | - Diana Leibman
- Department of Plant Pathology and Weed Research, Agricultural Research Organization, Volcani CenterRishon LeZion, Israel
| | - Dalia Wolf
- Department of Plant Science, Agricultural Research Organization, Volcani CenterRishon LeZion, Israel
| | - Menahem Edelstein
- Department of Plant Science, Agricultural Research Organization, Volcani CenterRishon LeZion, Israel
| | - Jackline Abu-Nassar
- Department of Plant Pathology and Weed Research, Newe Ya’ar Research Center, Agricultural Research Organization, Volcani CenterRamat Yishay, Israel
| | - Sally Marzouk
- Department of Plant Pathology and Weed Research, Newe Ya’ar Research Center, Agricultural Research Organization, Volcani CenterRamat Yishay, Israel
| | - Amit Gal-On
- Department of Plant Pathology and Weed Research, Agricultural Research Organization, Volcani CenterRishon LeZion, Israel
| | - Radi Aly
- Department of Plant Pathology and Weed Research, Newe Ya’ar Research Center, Agricultural Research Organization, Volcani CenterRamat Yishay, Israel
- *Correspondence: Radi Aly,
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Meena M, Prasad V, Zehra A, Gupta VK, Upadhyay RS. Mannitol metabolism during pathogenic fungal-host interactions under stressed conditions. Front Microbiol 2015; 6:1019. [PMID: 26441941 PMCID: PMC4585237 DOI: 10.3389/fmicb.2015.01019] [Citation(s) in RCA: 84] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2015] [Accepted: 09/08/2015] [Indexed: 12/03/2022] Open
Abstract
Numerous plants and fungi produce mannitol, which may serve as an osmolyte or metabolic store; furthermore, mannitol also acts as a powerful quencher of reactive oxygen species (ROS). Some phytopathogenic fungi use mannitol to stifle ROS-mediated plant resistance. Mannitol is essential in pathogenesis to balance cell reinforcements produced by both plants and animals. Mannitol likewise serves as a source of reducing power, managing coenzymes, and controlling cytoplasmic pH by going about as a sink or hotspot for protons. The metabolic pathways for mannitol biosynthesis and catabolism have been characterized in filamentous fungi by direct diminishment of fructose-6-phosphate into mannitol-1-phosphate including a mannitol-1-phosphate phosphatase catalyst. In plants mannitol is integrated from mannose-6-phosphate to mannitol-1-phosphate, which then dephosphorylates to mannitol. The enzyme mannitol dehydrogenase plays a key role in host–pathogen interactions and must be co-localized with pathogen-secreted mannitol to resist the infection.
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Affiliation(s)
- Mukesh Meena
- Department of Botany, Banaras Hindu University Varanasi, India
| | - Vishal Prasad
- Institute of Environment and Sustainable Development, Banaras Hindu University Varanasi, India
| | - Andleeb Zehra
- Department of Botany, Banaras Hindu University Varanasi, India
| | - Vijai K Gupta
- Molecular Glycobiotechnology Group, Discipline of Biochemistry, School of Natural Sciences, National University of Ireland Galway Galway, Ireland
| | - Ram S Upadhyay
- Department of Botany, Banaras Hindu University Varanasi, India
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15
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Sengupta D, Naik D, Reddy AR. Plant aldo-keto reductases (AKRs) as multi-tasking soldiers involved in diverse plant metabolic processes and stress defense: A structure-function update. JOURNAL OF PLANT PHYSIOLOGY 2015; 179:40-55. [PMID: 25840343 DOI: 10.1016/j.jplph.2015.03.004] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2014] [Revised: 03/06/2015] [Accepted: 03/08/2015] [Indexed: 05/18/2023]
Abstract
The aldo-keto reductase (AKR) superfamily comprises of a large number of primarily monomeric protein members, which reduce a broad spectrum of substrates ranging from simple sugars to potentially toxic aldehydes. Plant AKRs can be broadly categorized into four important functional groups, which highlight their roles in diverse plant metabolic reactions including reactive aldehyde detoxification, biosynthesis of osmolytes, secondary metabolism and membrane transport. Further, multiple overlapping functional aspects of plant AKRs including biotic and abiotic stress defense, production of commercially important secondary metabolites, iron acquisition from soil, plant-microbe interactions etc. are discussed as subcategories within respective major groups. Owing to the broad substrate specificity and multiple stress tolerance of the well-characterized AKR4C9 from Arabidopsis thaliana, protein sequences of all the homologues of AKR4C9 (A9-like proteins) from forty different plant species (Phytozome database) were analyzed. The analysis revealed that all A9-like proteins possess strictly conserved key catalytic residues (D-47, Y-52 and K-81) and belong to the pfam00248 and cl00470 AKR superfamilies. Based on structural homology of the three flexible loops of AKR4C9 (Loop A, B and C) responsible for broad substrate specificity, A9-like proteins found in Brassica rapa, Phaseolus vulgaris, Cucumis sativus, Populus trichocarpa and Solanum lycopersicum were predicted to have a similar range of substrate specificity. Thus, plant AKRs can be considered as potential breeding targets for developing stress tolerant varieties in the future. The present review provides a consolidated update on the current research status of plant AKRs with an emphasis on important functional aspects as well as their potential future prospects and an insight into the overall structure-function relationships of A9-like proteins.
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Affiliation(s)
- Debashree Sengupta
- Department of Environmental Biotechnology and Ecological Sciences, Indian Institute of Advanced Research, Gandhinagar 382007, Gujarat, India; Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500046, India
| | - Dhiraj Naik
- Department of Environmental Biotechnology and Ecological Sciences, Indian Institute of Advanced Research, Gandhinagar 382007, Gujarat, India
| | - Attipalli R Reddy
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad 500046, India.
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Homeologous genes involved in mannitol synthesis reveal unequal contributions in response to abiotic stress in Coffea arabica. Mol Genet Genomics 2014; 289:951-63. [PMID: 24861101 DOI: 10.1007/s00438-014-0864-y] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2013] [Accepted: 05/06/2014] [Indexed: 01/10/2023]
Abstract
Polyploid plants can exhibit transcriptional modulation in homeologous genes in response to abiotic stresses. Coffea arabica, an allotetraploid, accounts for 75% of the world's coffee production. Extreme temperatures, salinity and drought limit crop productivity, which includes coffee plants. Mannitol is known to be involved in abiotic stress tolerance in higher plants. This study aimed to investigate the transcriptional responses of genes involved in mannitol biosynthesis and catabolism in C. arabica leaves under water deficit, salt stress and high temperature. Mannitol concentration was significantly increased in leaves of plants under drought and salinity, but reduced by heat stress. Fructose content followed the level of mannitol only in heat-stressed plants, suggesting the partitioning of the former into other metabolites during drought and salt stress conditions. Transcripts of the key enzymes involved in mannitol biosynthesis, CaM6PR, CaPMI and CaMTD, were modulated in distinct ways depending on the abiotic stress. Our data suggest that changes in mannitol accumulation during drought and salt stress in leaves of C. arabica are due, at least in part, to the increased expression of the key genes involved in mannitol biosynthesis. In addition, the homeologs of the Coffea canephora subgenome did not present the same pattern of overall transcriptional response, indicating differential regulation of these genes by the same stimulus. In this way, this study adds new information on the differential expression of C. arabica homeologous genes under adverse environmental conditions showing that abiotic stresses can influence the homeologous gene regulation pattern, in this case, mainly on those involved in mannitol pathway.
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Calmes B, Guillemette T, Teyssier L, Siegler B, Pigné S, Landreau A, Iacomi B, Lemoine R, Richomme P, Simoneau P. Role of mannitol metabolism in the pathogenicity of the necrotrophic fungus Alternaria brassicicola. FRONTIERS IN PLANT SCIENCE 2013; 4:131. [PMID: 23717316 PMCID: PMC3652318 DOI: 10.3389/fpls.2013.00131] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2013] [Accepted: 04/20/2013] [Indexed: 05/29/2023]
Abstract
In this study, the physiological functions of fungal mannitol metabolism in the pathogenicity and protection against environmental stresses were investigated in the necrotrophic fungus Alternaria brassicicola. Mannitol metabolism was examined during infection of Brassica oleracea leaves by sequential HPLC quantification of the major soluble carbohydrates and expression analysis of genes encoding two proteins of mannitol metabolism, i.e., a mannitol dehydrogenase (AbMdh), and a mannitol-1-phosphate dehydrogenase (AbMpd). Knockout mutants deficient for AbMdh or AbMpd and a double mutant lacking both enzyme activities were constructed. Their capacity to cope with various oxidative and drought stresses and their pathogenic behavior were evaluated. Metabolic and gene expression profiling indicated an increase in mannitol production during plant infection. Depending on the mutants, distinct pathogenic processes, such as leaf and silique colonization, sporulation, survival on seeds, were impaired by comparison to the wild-type. This pathogenic alteration could be partly explained by the differential susceptibilities of mutants to oxidative and drought stresses. These results highlight the importance of mannitol metabolism with respect to the ability of A. brassicicola to efficiently accomplish key steps of its pathogenic life cycle.
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Affiliation(s)
- Benoit Calmes
- SFR 4207 QUASAV, UMR 1345 IRHS, Université d'AngersAngers Cedex, France
- SFR 4207 QUASAV, INRA, UMR 1345 IRHSAngers Cedex, France
- SFR 4207 QUASAV, Agrocampus-Ouest, UMR 1345 IRHSAngers Cedex, France
| | - Thomas Guillemette
- SFR 4207 QUASAV, UMR 1345 IRHS, Université d'AngersAngers Cedex, France
- SFR 4207 QUASAV, INRA, UMR 1345 IRHSAngers Cedex, France
- SFR 4207 QUASAV, Agrocampus-Ouest, UMR 1345 IRHSAngers Cedex, France
| | - Lény Teyssier
- SFR 4207 QUASAV, UMR 1345 IRHS, Université d'AngersAngers Cedex, France
- SFR 4207 QUASAV, INRA, UMR 1345 IRHSAngers Cedex, France
- SFR 4207 QUASAV, Agrocampus-Ouest, UMR 1345 IRHSAngers Cedex, France
| | - Benjamin Siegler
- Plateforme d'Ingénierie et Analyses Moléculaires, Université d'AngersAngers Cedex, France
| | - Sandrine Pigné
- SFR 4207 QUASAV, UMR 1345 IRHS, Université d'AngersAngers Cedex, France
- SFR 4207 QUASAV, INRA, UMR 1345 IRHSAngers Cedex, France
- SFR 4207 QUASAV, Agrocampus-Ouest, UMR 1345 IRHSAngers Cedex, France
| | - Anne Landreau
- SONAS EA 921, SFR 4207, QUASAV UFR des Sciences Pharmaceutiques et d'Ingénierie de la Santé, Université d'AngersAngers Cedex, France
| | | | - Rémi Lemoine
- Ecologie, Biologie des Interactions, UMR 7267 CNRS/Université de PoitiersPoitiers, France
| | - Pascal Richomme
- SONAS EA 921, SFR 4207, QUASAV UFR des Sciences Pharmaceutiques et d'Ingénierie de la Santé, Université d'AngersAngers Cedex, France
| | - Philippe Simoneau
- SFR 4207 QUASAV, UMR 1345 IRHS, Université d'AngersAngers Cedex, France
- SFR 4207 QUASAV, INRA, UMR 1345 IRHSAngers Cedex, France
- SFR 4207 QUASAV, Agrocampus-Ouest, UMR 1345 IRHSAngers Cedex, France
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Chan Z, Bigelow PJ, Loescher W, Grumet R. Comparison of salt stress resistance genes in transgenic Arabidopsis thaliana indicates that extent of transcriptomic change may not predict secondary phenotypic or fitness effects. PLANT BIOTECHNOLOGY JOURNAL 2012; 10:284-300. [PMID: 22070784 DOI: 10.1111/j.1467-7652.2011.00661.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Engineered abiotic stress resistance is an important target for increasing agricultural productivity. There are concerns, however, regarding possible ecological impacts of transgenic crops. In contrast to the first wave of transgenic crops, many abiotic stress resistance genes can initiate complex downstream changes. Transcriptome profiling has been suggested as a comprehensive non-targeted approach to examine the secondary effects. We compared phenotypic and transcriptomic effects of constitutive expression of genes intended to confer salt stress tolerance by three different mechanisms: a transcription factor, CBF3/DREB1a; a metabolic gene, M6PR, for mannitol biosynthesis; and the Na⁺/H⁺ antiporter, SOS1. Transgenic CBF3, M6PR and SOS1 Arabidopsis thaliana were grown together in the growth chamber, greenhouse and field. In the absence of salt, M6PR and SOS1 lines performed comparably with wild type; CBF3 lines exhibited dwarfing as reported previously. All three transgenes conferred fitness advantage when subjected to 100 mm NaCl in the growth chamber. CBF3 and M6PR affected transcription of numerous abiotic stress-related genes as measured by Affymetrix microarray analysis. M6PR additionally modified expression of biotic stress and oxidative stress genes. Transcriptional effects of SOS1 in the absence of salt were smaller and primarily limited to redox-related genes. The extent of transcriptome change, however, did not correlate with the effects on growth and reproduction. Thus, the magnitude of global transcriptome differences may not predict phenotypic differences upon which environment and selection act to influence fitness. These observations have implications for interpretation of transcriptome analyses in the context of risk assessment and emphasize the importance of evaluation within a phenotypic context.
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Affiliation(s)
- Zhulong Chan
- Plant Breeding, Genetics and Biotechnology Program and Department of Horticulture, Plant and Soil Sciences Building, Michigan State University, East Lansing MI, USA
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19
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Suitability of non-lethal marker and marker-free systems for development of transgenic crop plants: Present status and future prospects. Biotechnol Adv 2011; 29:703-14. [DOI: 10.1016/j.biotechadv.2011.05.019] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2010] [Revised: 05/30/2011] [Accepted: 05/31/2011] [Indexed: 12/16/2022]
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20
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Conde A, Silva P, Agasse A, Conde C, Gerós H. Mannitol transport and mannitol dehydrogenase activities are coordinated in Olea europaea under salt and osmotic stresses. PLANT & CELL PHYSIOLOGY 2011; 52:1766-75. [PMID: 21893515 DOI: 10.1093/pcp/pcr121] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The intracellular accumulation of organic compatible solutes functioning as osmoprotectants, such as polyols, is an important response mechanism of several plants to drought and salinity. In Olea europaea a mannitol transport system (OeMaT1) was previously characterized as a key player in plant response to salinity. In the present study, heterotrophic sink models, such as olive cell suspensions and fruit tissues, and source leaves were used for analytical, biochemical and molecular studies. The kinetic parameters of mannitol dehydrogenase (MTD) determined in cells growing in mannitol, at 25°C and pH 9.0, were as follows: K(m), 54.5 mM mannitol; and V(max), 0.47 μmol h⁻¹ mg⁻¹ protein. The corresponding cDNA was cloned and named OeMTD1. OeMTD1 expression was correlated with MTD activity, OeMaT1 expression and carrier-mediated mannitol transport in mannitol- and sucrose-grown cells. Furthermore, sucrose-grown cells displayed only residual OeMTD activity, even though high levels of OeMTD1 transcription were observed. There is evidence that OeMTD is regulated at both transcriptional and post-transcriptional levels. MTD activity and OeMTD1 expression were repressed after Na+, K+ and polyethylene glycol (PEG) treatments, in both mannitol- and sucrose-grown cells. In contrast, salt and drought significantly increased mannitol transport activity and OeMaT1 expression. Taken together, these studies support that olive trees cope with salinity and drought by coordinating mannitol transport with intracellular metabolism.
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Affiliation(s)
- Artur Conde
- Centro de Investigação e de Tecnologias Agro-Ambientais e Biológicas (CITAB), Portugal
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21
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Song GQ, Sink KC, Ma Y, Herlache T, Hancock JF, Loescher WH. A novel mannose-based selection system for plant transformation using celery mannose-6-phosphate reductase gene. PLANT CELL REPORTS 2010; 29:163-72. [PMID: 20033814 DOI: 10.1007/s00299-009-0809-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2009] [Revised: 12/07/2009] [Accepted: 12/08/2009] [Indexed: 05/28/2023]
Abstract
To investigate its potential application as a selectable marker for plant transformation, the mannitol producing, celery mannose-6-phosphate reductase gene (M6PR) was transformed into Arabidopsis and tobacco using Agrobacterium tumefaciens-mediated transformation. Mannose-tolerance assays in transgenic materials revealed that the M6PR can act as a selectable marker gene in either a positive or a negative selection mode depending on the plant species. For mannose sensitive species, such as Arabidopsis, expression of M6PR enhanced mannose tolerance and provided a positive selection for transgenic seeds. On medium containing 2 g/L mannose, transgenic seeds germinated, whereas wild type (WT) seeds did not. For mannose-tolerant species, expression of M6PR increased mannose sensitivity in tobacco and enabled a negative selection for transgenic leaves and seeds. Mannose at 30 g/L blanched leaf explants from all 29 transgenic tobacco events with M6PR. In contrast, 30 g/L mannose did not inhibit shoot regeneration from leaf explants of WT or transgenic plants with either an antisense M6PR or a plasmid control. Similarly, mannose at 30 g/L inhibited seed germination of transgenic tobacco seeds with M6PR but not that of WT or transgenic tobacco with either the antisense M6PR or the plasmid control. Northern blot confirmed transcripts of the M6PR in transgenic tobacco, and accumulation of mannitol verified activity of the M6PR in tobacco leaves. Either positive or negative selection using the celery M6PR is versatile for plant transformation. Additionally, the celery M6PR is a potential target gene for improving salt-tolerance in plants due to mannitol accumulation.
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Affiliation(s)
- Guo-Qing Song
- Plant Biotechnology Resource and Outreach Center, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA
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Aly R, Cholakh H, Joel DM, Leibman D, Steinitz B, Zelcer A, Naglis A, Yarden O, Gal-On A. Gene silencing of mannose 6-phosphate reductase in the parasitic weed Orobanche aegyptiaca through the production of homologous dsRNA sequences in the host plant. PLANT BIOTECHNOLOGY JOURNAL 2009; 7:487-98. [PMID: 19490480 DOI: 10.1111/j.1467-7652.2009.00418.x] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Orobanche spp. (broomrape) are parasitic plants which subsist on the roots of a wide range of hosts, including tomato, causing severe losses in yield quality and quantity. Large amounts of mannitol accumulate in this parasitic weed during development. Mannose 6-phosphate reductase (M6PR) is a key enzyme in mannitol biosynthesis, and it has been suggested that mannitol accumulation may be very important for Orobanche development. Therefore, the Orobanche M6PR gene is a potential target for efforts to control this parasite. Transgenic tomato plants were produced bearing a gene construct containing a specific 277-bp fragment from Orobanche aegyptiaca M6PR-mRNA, in an inverted-repeat configuration. M6PR-siRNA was detected in three independent transgenic tomato lines in the R1 generation, but was not detected in the parasite. Quantitative RT-PCR analysis showed that the amount of endogenous M6PR mRNA in the tubercles and underground shoots of O. aegyptiaca grown on transgenic host plants was reduced by 60%-80%. Concomitant with M6PR mRNA suppression, there was a significant decrease in mannitol level and a significant increase in the percentage of dead O. aegyptiaca tubercles on the transgenic host plants. The detection of mir390, which is involved with cytoplasmic dsRNA processing, is the first indication of the existence of gene-silencing mechanisms in Orobanche spp. Gene silencing mechanisms are probably involved with the production of decreased levels of M6PR mRNA in the parasites grown on the transformed tomato lines.
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Affiliation(s)
- Radi Aly
- Department of Plant Pathology and Weed Research, ARO, The Volcani Center, Newe-Yaar Research Center, Ramat Yishay, Israel.
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Simpson PJ, Tantitadapitak C, Reed AM, Mather OC, Bunce CM, White SA, Ride JP. Characterization of two novel aldo-keto reductases from Arabidopsis: expression patterns, broad substrate specificity, and an open active-site structure suggest a role in toxicant metabolism following stress. J Mol Biol 2009; 392:465-80. [PMID: 19616008 DOI: 10.1016/j.jmb.2009.07.023] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2009] [Revised: 06/26/2009] [Accepted: 07/09/2009] [Indexed: 11/17/2022]
Abstract
Aldo-keto reductases (AKRs) are widely distributed in nature and play numerous roles in the metabolism of steroids, sugars, and other carbonyls. They have also frequently been implicated in the metabolism of exogenous and endogenous toxicants, including those stimulated by stress. Although the Arabidopsis genome includes at least 21 genes with the AKR signature, very little is known of their functions. In this study, we have screened the Arabidopsis thaliana genomic sequence for genes with significant homology to members of the mammalian AKR1 family and identified four homologues for further study. Following alignment of the predicted protein sequences with representatives from the AKR superfamily, the proteins were ascribed not to the AKR1 family but to the AKR4C subfamily, with the individual designations of AKR4C8, AKR4C9, AKR4C10, and AKR4C11. Expression of two of the genes, AKR4C8 and AKR4C9, has been shown to be coordinately regulated and markedly induced by various forms of stress. The genes have been overexpressed in bacteria, and recombinant proteins have been purified and crystallized. Both enzymes display NADPH-dependent reduction of carbonyl compounds, typical of the superfamily, but will accept a very wide range of substrates, reducing a range of steroids, sugars, and aliphatic and aromatic aldehydes/ketones, although there are distinct differences between the two enzymes. We have obtained high-resolution crystal structures of AKR4C8 (1.4 A) and AKR4C9 (1.25 A) in ternary complexes with NADP(+) and acetate. Three extended loops, present in all AKRs and responsible for defining the cofactor- and substrate-binding sites, are shorter in the 4C subfamily compared to other AKRs. Consequently, the crystal structures reveal open and accommodative substrate-binding sites, which correlates with their broad substrate specificity. It is suggested that the primary role of these enzymes may be to detoxify a range of toxic aldehydes and ketones produced during stress, although the precise nature of the principal natural substrates remains to be determined.
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Affiliation(s)
- Paul J Simpson
- School of Biosciences, University of Birmingham, Edgbaston, Birmingham, UK
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25
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Kato A, Inouhe M. Mannose accommodation of Vigna angularis cells on solid agar medium involves its possible conversion to sucrose mediated by enhanced phosphomannose isomerase activity. JOURNAL OF PLANT RESEARCH 2008; 121:339-349. [PMID: 18301863 DOI: 10.1007/s10265-008-0150-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2007] [Accepted: 01/18/2008] [Indexed: 05/26/2023]
Abstract
Mannose is an unusable carbon source for many plants. In our study we compared the effects of mannose and sucrose on growth and sucrose levels in azuki bean (Vigna angularis) cells grown in liquid media and in solid media. The suspension cells grew actively in a liquid medium containing 90 mM sucrose but not in that containing 90 mM mannose, where the intracellular sucrose levels were reduced to 20% or less of those in sucrose-grown cells. These results suggested that the limited conversion of mannose to sucrose resulted in cell growth inhibition. When sucrose-grown suspension cells (1 x 10(5)) were transferred onto agar medium containing mannose, they grew little initially, but, after a month lag period, they started to form many callus colonies at a high apparent variation rate (1.3 x 10(-3)). Time-course studies for sugar and enzyme analysis revealed that the mannose-accommodated cells were capable of converting mannose to sucrose, with enhanced phosphomannose isomerase activity. The mannose-accommodated cells actively grew in liquid medium with sucrose but lost their ability to grow with mannose again, suggesting a specific trait of callus culture for mannose utilization. The possible differences in the metabolic activities and other physiological characteristics are discussed between callus and suspension cells.
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Affiliation(s)
- Aki Kato
- Biology and Environmental Sciences, Graduate School of Science and Engineering, Ehime University, Matsuyama, Ehime, 790-8577, Japan
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Wolucka BA, Van Montagu M. The VTC2 cycle and the de novo biosynthesis pathways for vitamin C in plants: an opinion. PHYTOCHEMISTRY 2007; 68:2602-13. [PMID: 17950389 DOI: 10.1016/j.phytochem.2007.08.034] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2007] [Accepted: 08/22/2007] [Indexed: 05/18/2023]
Abstract
The recent identification of the VTC2 enzyme (GDP-l-galactose: hexose 1-phosphate guanylyltransferase) that forms with the GDP-mannose 3'',5'' epimerase an energy-conserving hub for the production of GDP-hexoses and l-galactose 1-phosphate [Laing et al., Proc. Natl. Acad. Sci. USA 104, 2007, 9534-9539], is a major breakthrough in our understanding of the biosynthesis of l-ascorbic acid (vitamin C) in plants. The observation that the VTC2 enzyme can use glucose 1-phosphate and GDP-d-glucose as substrates, and the long-known existence of an enigmatic GDP-d-mannose 2''-epimerase activity, have led us to the proposal of an extended VTC2 cycle that links photosynthesis with the biosynthesis of vitamin C and the cell-wall metabolism in plants. An evolutionary scenario is discussed for the acquisition of genes of eubacterial origin for the de novo synthesis of l-ascorbic acid in green algae and plants.
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Affiliation(s)
- Beata A Wolucka
- Laboratory of Mycobacterial Biochemistry, Institute of Public Health, 642 Engeland Street, B-1180 Brussels, Belgium.
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Juchaux-Cachau M, Landouar-Arsivaud L, Pichaut JP, Campion C, Porcheron B, Jeauffre J, Noiraud-Romy N, Simoneau P, Maurousset L, Lemoine R. Characterization of AgMaT2, a plasma membrane mannitol transporter from celery, expressed in phloem cells, including phloem parenchyma cells. PLANT PHYSIOLOGY 2007; 145:62-74. [PMID: 17631523 PMCID: PMC1976583 DOI: 10.1104/pp.107.103143] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2007] [Accepted: 07/03/2007] [Indexed: 05/16/2023]
Abstract
A second mannitol transporter, AgMaT2, was identified in celery (Apium graveolens L. var. dulce), a species that synthesizes and transports mannitol. This transporter was successfully expressed in two different heterologous expression systems: baker's yeast (Saccharomyces cerevisiae) cells and tobacco (Nicotiana tabacum) plants (a non-mannitol-producing species). Data indicated that AgMaT2 works as an H(+)/mannitol cotransporter with a weak selectivity toward other polyol molecules. When expressed in tobacco, AgMaT2 decreased the sensitivity to the mannitol-secreting pathogenic fungi Alternaria longipes, suggesting a role for polyol transporters in defense mechanisms. In celery, in situ hybridization showed that AgMaT2 was expressed in the phloem of leaflets, petioles from young and mature leaves, floral stems, and roots. In the phloem of petioles and leaflets, AgMaT2, as localized with specific antibodies, was present in the plasma membrane of three ontologically related cell types: sieve elements, companion cells, and phloem parenchyma cells. These new data are discussed in relation to the physiological role of AgMaT2 in regulating mannitol fluxes in celery petioles.
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Affiliation(s)
- Marjorie Juchaux-Cachau
- Unité Mixte de Recherche, Centre National de la Recherche Scientifique, 6161 Transport des Assimilats, Université de Poitiers, Bâtiment Botanique, 86022 Poitiers cedex, France
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Sickler CM, Edwards GE, Kiirats O, Gao Z, Loescher W. Response of mannitol-producing Arabidopsis thaliana to abiotic stress. FUNCTIONAL PLANT BIOLOGY : FPB 2007; 34:382-391. [PMID: 32689365 DOI: 10.1071/fp06274] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2006] [Accepted: 02/15/2007] [Indexed: 06/11/2023]
Abstract
In celery, mannitol is a primary photosynthetic product that is associated with celery's exceptional salt tolerance. Arabidopsis plants transformed with celery's mannose-6-phosphate reductase (M6PR) gene produce mannitol and grow normally in the absence of stress. Daily analysis of the increase in growth (fresh and dry weight, leaf number, leaf area per plant and specific leaf weight) over a 12-day period showed less effect of salt (100 mm NaCl) on the M2 transformant than wild type (WT). Following a 12-day treatment of WT, M2 and M5 plants with 100 or 200 mm NaCl the total shoot fresh weight, leaf number, and leaf area were significantly greater in transformants than in WT plants. The efficiency of use of energy for photochemistry by PSII was measured daily under growth conditions. In WT plants treated with 100 mm NaCl, the PSII yield begin decreasing after 6 days with a 50% loss in yield after 12 days, indicating a severe loss in PSII efficiency; whereas, there was no effect on the transformants. Under atmospheric levels of CO2, growth with 200 mm NaCl caused an increase in the substomatal levels of CO2 in WT plants but not in transformants. It also caused a marked decrease in carboxylation efficiency under limiting levels of CO2 in WT compared with transformants. When stress was imposed and growth reduced by withholding water for 12 days, which resulted in a similar decrease in relative water content to salt-treated plants, there were no differences among the genotypes in PSII yields or growth. The results suggest mannitol, which is known to be a compatible solute and antioxidant, protects photosynthesis against salt-related damage to chloroplasts.
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Affiliation(s)
- Christine M Sickler
- School of Biological Sciences and Center for Integrated Biotechnology, Washington State University, Pullman, WA 99164-4236, USA
| | - Gerald E Edwards
- School of Biological Sciences and Center for Integrated Biotechnology, Washington State University, Pullman, WA 99164-4236, USA
| | - Olavi Kiirats
- School of Biological Sciences and Center for Integrated Biotechnology, Washington State University, Pullman, WA 99164-4236, USA
| | - Zhifang Gao
- Department of Horticulture, Michigan State University, East Lansing, MI 48824 1325, USA
| | - Wayne Loescher
- Department of Horticulture, Michigan State University, East Lansing, MI 48824 1325, USA
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Gavidia I, Pérez-Bermúdez P, Seitz HU. Cloning and expression of two novel aldo-keto reductases from Digitalis purpurea leaves. EUROPEAN JOURNAL OF BIOCHEMISTRY 2002; 269:2842-50. [PMID: 12071946 DOI: 10.1046/j.1432-1033.2002.02931.x] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The aldo-keto reductase (AKR) superfamily comprises proteins that catalyse mainly the reduction of carbonyl groups or carbon-carbon double bonds of a wide variety of substrates including steroids. Such types of reactions have been proposed to occur in the biosynthetic pathway of the cardiac glycosides produced by Digitalis plants. Two cDNAs encoding leaf-specific AKR proteins (DpAR1 and DpAR2) were isolated from a D. purpurea cDNA library using the rat Delta4-3-ketosteroid 5beta-reductase clone. Both cDNAs encode 315 amino acid proteins showing 98.4% identity. DpAR proteins present high identities (68-80%) with four Arabidopsis clones and a 67% identity with the aldose/aldehyde reductase from Medicago sativa. A molecular phylogenetic tree suggests that these seven proteins belong to a new subfamily of the AKR superfamily. Southern analysis indicated that DpARs are encoded by a family of at most five genes. RNA-blot analyses demonstrated that the expression of DpAR genes is developmentally regulated and is restricted to leaves. The expression of DpAR genes has also been induced by wounding, elevated salt concentrations, drought stress and heat-shock treatment. The isolated cDNAs were expressed in Escherichia coli and the recombinant proteins purified. The expressed enzymes present reductase activity not only for various sugars but also for steroids, preferring NADH as a cofactor. These studies indicate the presence of plant AKR proteins with ketosteroid reductase activity. The function of the enzymes in cardenolide biosynthesis is discussed.
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Affiliation(s)
- Isabel Gavidia
- Center of Plant Molecular Biology (ZMBP), University of Tübingen, Germany.
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Delavault P, Simier P, Thoiron S, Véronési C, Fer A, Thalouarn P. Isolation of mannose 6-phosphate reductase cDNA, changes in enzyme activity and mannitol content in broomrape (Orobanche ramosa) parasitic on tomato roots. PHYSIOLOGIA PLANTARUM 2002; 115:48-55. [PMID: 12010466 DOI: 10.1034/j.1399-3054.2002.1150105.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
We are interested in developing a control strategy efficient at the early stages of subterranean development of Orobanche in the inhibition of mannose 6-phosphate reductase (M6PR, EC 1.1.1.224), the key enzyme of mannitol production in the parasite. We examined M6PR gene expression during pre-conditioning, germination, procaulome growth, underground shoot development and emergence of Orobanche ramosa L. attached to tomato roots, the enzyme activity at each of the above stages and the level of stored mannitol in the parasite. A 1120-pb length cDNA isolated by 3' and 5'RACE was identified as a M6PR sequence by cDNA expression in E. coli and M6PR activity measurement. Only one M6PR gene was detected in O. ramosa following southern blot analysis. M6PR expression, analysed by RT-PCR, was constant from the pre-conditioned seed to the emergence of broomrape, i.e. M6PR expression is constitutive in Orobanche. M6PR activity was also detected in pre-conditioned seeds and attachment to tomato roots resulted in a two-fold increase in enzyme activity during tubercle enlargement and crown root formation. Hexose and mannitol accumulation was strongly enhanced in the attached parasite, with accumulation primarily in the shoot. These results support the prospect of utilizing M6PR inhibitors as early applied herbicides to control this parasite in the early stages of its development.
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Affiliation(s)
- Philippe Delavault
- Groupe de Physiologie et Pathologie Végétales, Faculté des Sciences et des Techniques, BP 92208, 2 rue de la Houssinière F44322 Nantes cedex 03, France These authors contributed equally to this work
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Noiraud N, Maurousset L, Lemoine R. Identification of a mannitol transporter, AgMaT1, in celery phloem. THE PLANT CELL 2001; 13:695-705. [PMID: 11251106 PMCID: PMC135512 DOI: 10.1105/tpc.13.3.695] [Citation(s) in RCA: 93] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2000] [Accepted: 01/19/2001] [Indexed: 05/20/2023]
Abstract
A celery petiole phloem cDNA library was constructed and used to identify a cDNA that gives Saccharomyces cerevisiae cells the ability to grow on mannitol and transport radiolabeled mannitol in a manner consistent with a proton symport mechanism. This cDNA was named AgMaT1 (Apium graveolens mannitol transporter 1). The expression profile in source leaves and phloem was in agreement with a role for mannitol in phloem loading in celery. The identification in eukaryotes of a mannitol transporter is important because mannitol is not only a primary photosynthetic product in species such as celery but is also considered a compatible solute and antioxidant implicated in resistance to biotic and abiotic stress.
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Affiliation(s)
- N Noiraud
- Laboratoire de Physiologie et Biochimie Végétales, Centre National de la Recherche Scientifique Unité Mixte de Recherches 6161, 40 Avenue du Recteur Pineau, F-86022 Poitiers Cedex, France
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Gao Z, Loescher WH. NADPH supply and mannitol biosynthesis. Characterization, cloning, and regulation of the non-reversible glyceraldehyde-3-phosphate dehydrogenase in celery leaves. PLANT PHYSIOLOGY 2000; 124:321-30. [PMID: 10982446 PMCID: PMC59146 DOI: 10.1104/pp.124.1.321] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2000] [Accepted: 05/22/2000] [Indexed: 05/20/2023]
Abstract
Mannitol, a sugar alcohol, is a major primary photosynthetic product in celery (Apium graveolens L. cv Giant Pascal). We report here on purification, characterization, and cDNA cloning of cytosolic non-reversible glyceraldehyde-3-P dehydrogenase (nr-G3PDH, EC 1.2.1. 9), the apparent key contributor of the NADPH required for mannitol biosynthesis in celery leaves. As determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, purified nr-G3PDH showed a molecular mass of 53 kD. A 1,734-bp full-length cDNA clone (accession no. AF196292) encoding nr-G3PDH was identified using polymerase chain reaction and rapid amplification of cDNA ends techniques. The cDNA clone has an open reading frame of 1,491 bp encoding 496 amino acid residues with a calculated molecular weight of 53,172. K(m) values for the celery nr-G3PDH were low (6.8 microM for NADP(+) and 29 microM for D-glyceraldehyde-3-P). NADPH, 3-phosphoglycerate, and ATP were competitive inhibitors, and cytosolic levels of these three metabolites (as determined by nonaqueous fractionation) were all above the concentrations necessary to inhibit activity in vitro, suggesting that nr-G3PDH may be regulated through feedback inhibition by one or more metabolites. We also determined a tight association between activities of nr-G3PDH and mannose-6-P reductase and mRNA expression levels in response to both leaf development and salt treatment. Collectively, our data clearly show metabolic, developmental, and environmental regulation of nr-G3PDH, and also suggest that the supply of NADPH necessary for mannitol biosynthesis is under tight metabolic control.
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Affiliation(s)
- Z Gao
- Department of Horticulture, Michigan State University, East Lansing, Michigan 48824-1325, USA
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Noiraud N, Delrot S, Lemoine R. The sucrose transporter of celery. Identification and expression during salt stress. PLANT PHYSIOLOGY 2000; 122:1447-55. [PMID: 10759540 PMCID: PMC58979 DOI: 10.1104/pp.122.4.1447] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/1999] [Accepted: 01/06/2000] [Indexed: 05/18/2023]
Abstract
In celery (Apium graveolens L.), long-distance transport of reduced carbon occurs both in the form of sucrose (Suc) and mannitol. The presence of mannitol has been related to the resistance of celery to salt stress. To investigate the transport events occurring during salt stress, we have cloned the H(+)/Suc transporter of celery AgSUT1 (A. graveolens Suc uptake transport 1) from a mature leaf cDNA library. The function of the encoded protein was confirmed by expression in yeast. AgSUT1 is a H(+)/Suc transporter with a high affinity for Suc (K(m) of 139 microM). Another closely related cDNA (AgSUT2) was also identified. AgSUT1 is mainly expressed in mature leaves and phloem of petioles, but also in sink organs such as roots. When celery plants were subjected to salt stress conditions (30 d watering with 300 mM NaCl) favoring mannitol accumulation (J.D. Everard, R. Gucci, S.C. Kann, J.A. Flore, W.H. Loescher [1994] Plant Physiol 106: 281-292), AgSUT1 expression was decreased in all organs, but markedly in roots. The results are discussed in relation to the physiology of celery.
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Affiliation(s)
- N Noiraud
- Laboratoire de Physiologie et Biochimie Végétales, Centre National de la Recherche Scientifique Equipe Supérieure Associée 6161, 40, Avenue du Recteur Pineau, F-86022 Poitiers cedex, France
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Moing A. Sugar alcohols as carbohydrate reserves in some higher plants. DEVELOPMENTS IN CROP SCIENCE 2000. [DOI: 10.1016/s0378-519x(00)80017-3] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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