1
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Dutta D, Sharma P, Gomila RM, Frontera A, Barcelo-Oliver M, Verma AK, Gogoi M, Bhattacharyya MK. Solvent driven structural topologies involving unconventional O H(methanol)⋯π contact and anti-cooperative HB⋯anion-π⋯HB assemblies with unusual enclathration of dual guest (H2O)4 cores in Mn(II) and Ni(II) coordination compounds: Antiproliferative evaluation and theoretical studies. Polyhedron 2021. [DOI: 10.1016/j.poly.2021.115503] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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2
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Nath H, Sharma P, Frontera A, Verma AK, Das A, Barceló-Oliver M, Bhattacharyya MK. Energetically significant unconventional O H⋯π contacts involving discrete guest (H2O)8 clusters in a fumarato bridged polymeric supramolecular host of Ni(II) phenanthroline: Antiproliferative evaluation and theoretical studies. Polyhedron 2020. [DOI: 10.1016/j.poly.2019.114266] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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3
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Bosmans V, Poater J, Hammink R, Tinnemans P, Bickelhaupt FM, Mecinović J. Probing Through-Space Polar−π Interactions in 2,6-Diarylphenols. J Org Chem 2019; 84:3632-3637. [DOI: 10.1021/acs.joc.8b03147] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Vera Bosmans
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
| | - Jordi Poater
- ICREA, Passeig Lluís Companys 23, 08010 Barcelona, Spain
- Departament de Química Inorgànica i Orgànica & IQTCUB, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Roel Hammink
- Department of Tumor Immunology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Geert Grooteplein 26, 6525 GA, Nijmegen, The Netherlands
| | - Paul Tinnemans
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
| | - F. Matthias Bickelhaupt
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
- Department of Theoretical Chemistry, Amsterdam Center for Multiscale Modeling, Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
| | - Jasmin Mecinović
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense, Denmark
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Searles K, Tran BL, Pink M, Chen CH, Mindiola DJ. 3d Early Transition Metal Complexes Supported by a New Sterically Demanding Aryloxide Ligand. Inorg Chem 2013; 52:11126-35. [DOI: 10.1021/ic401363p] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Keith Searles
- Department of Chemistry and
the Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Ba L. Tran
- Department of Chemistry and
the Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Maren Pink
- Department of Chemistry and
the Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Chun-Hsing Chen
- Department of Chemistry and
the Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Daniel J. Mindiola
- Department of Chemistry and
the Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
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5
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Crystalline inclusion compounds of new hydroxy hosts featuring a pentaaryl substituted cyclopentadienol framework. J INCL PHENOM MACRO 2010. [DOI: 10.1007/s10847-010-9850-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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6
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Takahashi O, Yamasaki K, Kohno Y, Ueda K, Suezawa H, Nishio M. The origin of the generalized anomeric effect: possibility of CH/n and CH/pi hydrogen bonds. Carbohydr Res 2009; 344:1225-9. [PMID: 19467651 DOI: 10.1016/j.carres.2009.04.011] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2008] [Revised: 04/08/2009] [Accepted: 04/13/2009] [Indexed: 10/20/2022]
Abstract
Ab initio MO calculations were carried out at the MP4/6-311++G(3df,3pd)//MP2/6-311++G(3df,3pd) level to investigate the conformational Gibbs energy of a series of methyl ethers CH(3)O-CH(2)-X (X=OH, OCH(3), F, Cl, Br, CN, C triple bond CH, C(6)H(5), CHO). It was found that the Gibbs energy of the gauche conformers is lower in every case than that of the corresponding anti conformers. In the more stable gauche conformers, the interatomic distance between X and the hydrogen atom was shorter than the sum of the van der Waals radii. The natural bonding orbital (NBO) charges of group X were more negative in the gauche conformers than in the anti conformers. We suggest that the CH/n and CH/pi hydrogen bonds play an important role in stabilizing the gauche conformation of these compounds.
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Affiliation(s)
- Osamu Takahashi
- Department of Chemistry, Graduate School of Science, Hiroshima University, Kagamiyama, Higashi-Hiroshima-shi 739-8526, Japan.
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Takahashi O, Yamasaki K, Kohno Y, Ueda K, Suezawa H, Nishio M. Origin of the axial-alkyl preference of (R)-α-phellandrene and related compounds investigated by high-level ab initio MO calculations. Importance of the CH/π hydrogen bond. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.04.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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8
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Dickie DA, MacIntosh IS, Ino DD, He Q, Labeodan OA, Jennings MC, Schatte G, Walsby CJ, Clyburne JA. Synthesis of the bulkym-terphenyl phenol Ar*OH (Ar* = C6H3-2,6-Mes2, Mes = 2,4,6-trimethylphenyl) and the preparation and structural characterization of several of its metal complexes. CAN J CHEM 2008. [DOI: 10.1139/v07-131] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The bulky m-terphenyl phenol Ar*OH 1 (Ar* = C6H3-2,6-Mes2, Mes = 2,4,6-trimethylphenyl) was synthesized via the treatment of Ar*Li with nitrobenzene. The phenol 1 is prepared in modest to good yield using this method. Attempts were also made to prepare 1 through oxidation of the bulky boronic acid Ar*B(OH)2with Oxone®, but this reaction was not suitable for preparative-scale reactions. Side products of the reaction between Ar*Li and nitrobenzene were identified as Ar*[N(O)Ph] and [C6H5N(O)]2and were characterized by X-ray crystallography and EPR spectroscopy. A variety of main-group and transition-metal complexes of Ar*OH were prepared, namely Sn(OAr*)2, Ge(OAr*)2, [N(SiMe3)2]Ge(OAr*), [Me2Al(OAr*)]2, and Ti(NMe2)(OAr*)2. All compounds were characterized spectroscopically and most were studied by single-crystal X-ray diffraction as well.Key words: m-terphenyl, main-group compounds, X-ray crystallography, multinuclear NMR spectroscopy, EPR spectroscopy.
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Jalarvo N, Desmedt A, Lechner RE, Mezei F. The dynamical properties of the aromatic hydrogen bond in NH4(C6H5)4B from quasielastic neutron scattering. J Chem Phys 2006; 125:184513. [PMID: 17115771 DOI: 10.1063/1.2374888] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
NH(4)(C(6)H(5))(4)B represents a prototypical system for understanding aromatic H bonds. In NH(4)(C(6)H(5))(4)B an ammonium cation is trapped in an aromatic cage of four phenyl rings and each phenyl ring serves as a hydrogen bond acceptor for the ammonium ion as donor. Here the dynamical properties of the aromatic hydrogen bond in NH(4)(C(6)H(5))(4)B were studied by quasielastic incoherent neutron scattering in a broad temperature range (20< or =T< or =350 K). We show that in the temperature range from 67 to 350 K the ammonium ions perform rotational jumps around C(3) axes. The correlation time for this motion is the lifetime of the "transient" H bonds. It varies from 1.5 ps at T=350 K to 150 ps at T=67 K. The activation energy was found to be 3.14 kJ mol, which means only 1.05 kJ mol per single H bond for reorientations around the C(3) symmetry axis of the ammonium group. This result shows that the ammonium ions have to overcome an exceptionally low barrier to rotate and thereby break their H bonds. In addition, at temperatures above 200 K local diffusive reorientational motions of the phenyl rings, probably caused by interaction with ammonium-group reorientations, were found within the experimental observation time window. At room temperature a reorientation angle of 8.4 degrees +/-2 degrees and a correlation time of 22+/-8 ps were determined for the latter. The aromatic H bonds are extremely short lived due to the low potential barriers allowing for molecular motions with a reorientational character of the donors. The alternating rupture and formation of H bonds causes very strong damping of the librational motion of the acceptors, making the transient H bond appear rather flexible.
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Affiliation(s)
- Niina Jalarvo
- Department SF1, Hahn-Meitner Institut, Glienickerstrasse 100, D14109 Berlin, Germany.
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Chetkina LA, Belsky VK. Conformational features and geometry of molecules in crystals of bridging ortho,ortho-bisphenols and related compounds: A review. CRYSTALLOGR REP+ 2005. [DOI: 10.1134/1.1996731] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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11
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Orian L, Ganis P, Santi S, Ceccon A. Molecular conformations and π-hydrogen bonds in anti- and syn-binuclear Rh(I) complexes of as-indacene-diide: a computational study. J Organomet Chem 2005. [DOI: 10.1016/j.jorganchem.2004.09.078] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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12
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Stanciu C, Olmstead M, Phillips A, Stender M, Power P. Synthesis and Characterization of the Very Bulky Phenols Ar*OH and Ar′OH (Ar* = C6H3-2,6-Trip2, Trip = C6H2-2,4,6-iPr3; Ar′ = C6H3-2,6-Dipp2, Dipp = C6H3-2,6-iPr2) and Their Lithium and Sodium Derivatives (LiOAr′)2 and (NaOAr*)2. Eur J Inorg Chem 2003. [DOI: 10.1002/ejic.200300306] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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13
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Kaji H, Tai T, Horii F. One- and Two-Dimensional MAS 13C NMR Analyses of Molecular Motions in Poly(2-hydroxypropyl Ether of Bisphenol-A). Macromolecules 2001. [DOI: 10.1021/ma010444v] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hironori Kaji
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Toshihiro Tai
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
| | - Fumitaka Horii
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
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14
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1,1-Diphenylpropanol: an intramolecular OH⋯π(phenyl) interaction under influence of crystalline forces. J Mol Struct 2001. [DOI: 10.1016/s0022-2860(00)00866-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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15
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Tada EB, Novaki LP, El Seoud OA. Solvatochromism in pure and binary solvent mixtures: effects of the molecular structure of the zwitterionic probe. J PHYS ORG CHEM 2000. [DOI: 10.1002/1099-1395(200011)13:11<679::aid-poc299>3.0.co;2-r] [Citation(s) in RCA: 79] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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16
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Twamley B, Haubrich ST, Power PP. Element Derivatives of Sterically Encumbering Terphenyl Ligands. ADVANCES IN ORGANOMETALLIC CHEMISTRY 1999. [DOI: 10.1016/s0065-3055(08)60619-x] [Citation(s) in RCA: 136] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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17
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Cooperative hydrogen bond cycles involving OH⋯π and CH⋯O hydrogen bonds as found in a hydrated dialkyne. J Mol Struct 1996. [DOI: 10.1016/s0022-2860(96)09337-4] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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18
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Nishio M, Umezawa Y, Hirota M, Takeuchi Y. The CH/π interaction: Significance in molecular recognition. Tetrahedron 1995. [DOI: 10.1016/0040-4020(94)01066-9] [Citation(s) in RCA: 514] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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19
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Copp SB, Holman KT, Sangster JOS, Subramanian S, Zaworotko MJ. Supramolecular chemistry of [{M(CO)3(µ3-OH)}4](M = Mn or Re): a modular approach to crystal engineering of superdiamondoid networks. ACTA ACUST UNITED AC 1995. [DOI: 10.1039/dt9950002233] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Steiner T, Starikov EB, Amado AM, Teixeira-Dias JJC. Weak hydrogen bonding. Part 2. The hydrogen bonding nature of short C–H ⋯π contacts: crystallographic, spectroscopic and quantum mechanical studies of some terminal alkynes. ACTA ACUST UNITED AC 1995. [DOI: 10.1039/p29950001321] [Citation(s) in RCA: 126] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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21
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Crystallographic evidence for intermolecular hydrogen bonding between aryl groups and OH groups in silanols. J Organomet Chem 1992. [DOI: 10.1016/0022-328x(92)83258-j] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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22
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Structure of phenolic polymer stabilizers. VI. Crystal structure of 2,2?-methylenebis(4-chloro-6-tert-butylphenol) and 2,2?-methylenebis(4-bromo-6-tert-butylphenol). J STRUCT CHEM+ 1989. [DOI: 10.1007/bf00748194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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23
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Structure of phenolic polymer stabilizers. J STRUCT CHEM+ 1987. [DOI: 10.1007/bf00748521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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24
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Structure of 1,1-diphenylpropan-1-ol with intramolecular OH...? hydrogen bond. J STRUCT CHEM+ 1985. [DOI: 10.1007/bf00754245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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25
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Ueji S, Nakatsu K, Yoshioka H, Kinoshita K. X-ray and IR studies on crystal and molecular structure of 4-nitro-2,6-diphenylphenol. Stereochemistry of bifurcated OH⋯π hydrogen bonds. Tetrahedron Lett 1982. [DOI: 10.1016/s0040-4039(00)87052-5] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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26
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Boussard G, Marraud M. R??le des electrons ? des fonctions amide et ester dans les peptides et depsipeptides. Biopolymers 1981; 20:169-185. [DOI: 10.1002/bip.1981.360200112] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/1980] [Accepted: 07/23/1980] [Indexed: 11/10/2022]
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