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Ganio K, Nasreen M, Yang Z, Maunders EA, Luo Z, Hossain SI, Ngu DHY, Ellis D, Gu J, Neville SL, Wilksch J, Gunn AP, Whittall JJ, Kobe B, Deplazes E, Kappler U, McDevitt CA. Hfe Permease and Haemophilus influenzae Manganese Homeostasis. ACS Infect Dis 2024; 10:436-452. [PMID: 38240689 PMCID: PMC10863617 DOI: 10.1021/acsinfecdis.3c00407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Revised: 01/07/2024] [Accepted: 01/08/2024] [Indexed: 02/10/2024]
Abstract
Haemophilus influenzae is a commensal of the human upper respiratory tract that can infect diverse host niches due, at least in part, to its ability to withstand both endogenous and host-mediated oxidative stresses. Here, we show that hfeA, a gene previously linked to iron import, is essential for H. influenzae manganese recruitment via the HfeBCD transporter. Structural analyses show that metal binding in HfeA uses a unique mechanism that involves substantial rotation of the C-terminal lobe of the protein. Disruption of hfeA reduced H. influenzae manganese acquisition and was associated with decreased growth under aerobic conditions, impaired manganese-superoxide dismutase activity, reduced survival in macrophages, and changes in biofilm production in the presence of superoxide. Collectively, this work shows that HfeA contributes to H. influenzae manganese acquisition and virulence attributes. High conservation of the hfeABCD permease in Haemophilus species suggests that it may serve similar roles in other pathogenic Pasteurellaceae.
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Affiliation(s)
- Katherine Ganio
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
| | - Marufa Nasreen
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
| | - Zihao Yang
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
| | - Eve A. Maunders
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
| | - Zhenyao Luo
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
- Institute
for Molecular Bioscience, The University
of Queensland, St Lucia, Queensland 4072, Australia
| | - Sheikh Imamul Hossain
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- School
of Life Sciences, University of Technology
Sydney, Ultimo, New South Wales 2007, Australia
| | - Dalton H. Y. Ngu
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
- Institute
for Molecular Bioscience, The University
of Queensland, St Lucia, Queensland 4072, Australia
| | - Daniel Ellis
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
| | - Jin Gu
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
| | - Stephanie L. Neville
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
| | - Jonathan Wilksch
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
| | - Adam P. Gunn
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
| | - Jonathan J. Whittall
- School of
Biological Sciences, University of Adelaide, Adelaide, South Australia 5005, Australia
| | - Boštjan Kobe
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
- Institute
for Molecular Bioscience, The University
of Queensland, St Lucia, Queensland 4072, Australia
| | - Evelyne Deplazes
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- School
of Life Sciences, University of Technology
Sydney, Ultimo, New South Wales 2007, Australia
| | - Ulrike Kappler
- School
of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
- Australian
Infectious Diseases Research Centre, The
University of Queensland, St Lucia, Queensland 4072, Australia
| | - Christopher A. McDevitt
- Department
of Microbiology and Immunology, the Peter Doherty Institute for Infection
and Immunity, The University of Melbourne, Melbourne, Victoria 3000, Australia
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Enhancement of Protein Crystallization Using Nano-Sized Metal–Organic Framework. CRYSTALS 2022. [DOI: 10.3390/cryst12050578] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Protein crystallization plays a fundamental role in structural biology and chemistry, drug discovery, and crystallography itself. Determining how to improve the crystal growth is necessary and vital during the whole process. According to the recently published data, crystallizing proteins on nanoporous surfaces (i.e., metal–organic framework, abbreviated as MOF) is faster and demands less protein. However, dispersing micro-sized MOF materials uniformly is still a challenge and limiting process in protein crystallization. Here, we investigate the uniformity of micro-sized MOF under the treatment of the high-pressure homogenizer. At various pressures, the MOF is split into particles of different sizes, including the uniform and stable nano-sized MOF. Crystallization experiments demonstrated its enhancement in protein crystallization, and the number of crystals is significantly increased in the presence of nano-sized MOF. This work explores the use of nano-sized MOF solids to crystallize proteins of limited availability (i.e., insufficient for conventional methods) or of a hard-to-crystallize nature.
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Ryan TM, Trewhella J, Murphy JM, Keown JR, Casey L, Pearce FG, Goldstone DC, Chen K, Luo Z, Kobe B, McDevitt CA, Watkin SA, Hawley AM, Mudie ST, Samardzic Boban V, Kirby N. An optimized SEC-SAXS system enabling high X-ray dose for rapid SAXS assessment with correlated UV measurements for biomolecular structure analysis. J Appl Crystallogr 2018. [DOI: 10.1107/s1600576717017101] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
A new optimized size exclusion chromatography small-angle X-ray scattering (SEC-SAXS) system for biomolecular SAXS at the Australian Synchrotron SAXS/WAXS beamline has been developed. The compact configuration reduces sample dilution to maximize sensitivity. Coflow sample presentation allows an 11-fold increase in flux on sample without capillary fouling, improving throughput and data quality, which are now primarily limited by the full flux available on the beamline. Multi-wavelength fibre optic UV analysis in close proximity to the X-ray beam allows for accurate concentration determination for samples with known UV extinction coefficients and thus estimation of the molecular weight of the scattering particle from the forward X-ray scattering intensity. Fast-flow low-volume SEC columns provide sample throughput competitive with batch concentration series measurements, albeit with a concomitant reduction of potential resolution relative to lower flow rates and larger SEC columns. The performance of the system is demonstrated using a set of model proteins, and its utility to solve various challenges is illustrated with a diverse suite of protein samples. These developments increase the quality and rigor of SEC-SAXS analysis and open new avenues for biomolecular solution SEC-SAXS studies that have been challenged by low sample yields, temporal instability, radiation sensitivity and complex mixtures.
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